RNA–Protein interactions for RNA: ENST00000540103.1

NPIPB4-212, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 631 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-212ENST00000540103 PRKAB2O43741 272 aa9.68□□□□□ -0.86
NPIPB4-212ENST00000540103 SMARCA5O60264 1052 aaPredicted RBP9.68□□□□□ -0.86
NPIPB4-212ENST00000540103 CNMDO75829 334 aa9.68□□□□□ -0.86
NPIPB4-212ENST00000540103 INHAP05111 366 aa9.68□□□□□ -0.86
NPIPB4-212ENST00000540103 IFIT2P09913 472 aaKnown RBP9.68□□□□□ -0.86
NPIPB4-212ENST00000540103 MNX1P50219 401 aaPredicted RBP9.68□□□□□ -0.86
NPIPB4-212ENST00000540103 UBXN2AP68543 259 aa9.68□□□□□ -0.86
NPIPB4-212ENST00000540103 CERKLQ49MI3 558 aaPredicted RBP9.68□□□□□ -0.86
NPIPB4-212ENST00000540103 CATSPERGQ6ZRH7 1159 aa9.68□□□□□ -0.86
NPIPB4-212ENST00000540103 LCORLQ8N3X6 602 aa9.68□□□□□ -0.86
NPIPB4-212ENST00000540103 NKX2-3Q8TAU0 364 aa9.68□□□□□ -0.86
NPIPB4-212ENST00000540103 U2AF1L4Q8WU68 220 aaKnown RBP9.68□□□□□ -0.86
NPIPB4-212ENST00000540103 SDR42E1Q8WUS8 393 aa9.68□□□□□ -0.86
NPIPB4-212ENST00000540103 COA7Q96BR5 231 aa9.68□□□□□ -0.86
NPIPB4-212ENST00000540103 CCDC136Q96JN2 1154 aa9.68□□□□□ -0.86
NPIPB4-212ENST00000540103 KIAA1683Q9H0B3 1180 aa9.68□□□□□ -0.86
NPIPB4-212ENST00000540103 PAG1Q9NWQ8 432 aa9.68□□□□□ -0.86
NPIPB4-212ENST00000540103 TMOD4Q9NZQ9 345 aa9.68□□□□□ -0.86
NPIPB4-212ENST00000540103 RLFQ13129 1914 aa9.67□□□□□ -0.86
NPIPB4-212ENST00000540103 CYP2D6P10635 497 aa9.67□□□□□ -0.86
NPIPB4-212ENST00000540103 TRIM32Q13049 653 aa9.67□□□□□ -0.86
NPIPB4-212ENST00000540103 ABCB5Q2M3G0 1257 aa9.67□□□□□ -0.86
NPIPB4-212ENST00000540103 HABP4Q5JVS0 413 aaKnown RBP9.67□□□□□ -0.86
NPIPB4-212ENST00000540103 KIAA1755Q5JYT7 1200 aa9.67□□□□□ -0.86
NPIPB4-212ENST00000540103 MORN1Q5T089 497 aa9.67□□□□□ -0.86
NPIPB4-212ENST00000540103 MAP3K21Q5TCX8 1036 aa9.67□□□□□ -0.86
NPIPB4-212ENST00000540103 GPRC5AQ8NFJ5 357 aa9.67□□□□□ -0.86
NPIPB4-212ENST00000540103 DNAJC2Q99543 621 aaKnown RBP9.67□□□□□ -0.86
NPIPB4-212ENST00000540103 PORCNQ9H237 461 aa9.67□□□□□ -0.86
NPIPB4-212ENST00000540103 BIN2Q9UBW5 565 aaPredicted RBP9.67□□□□□ -0.86
NPIPB4-212ENST00000540103 BAZ2AQ9UIF9 1905 aaKnown RBP9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 H0YGN5 161 aa9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 IGHA2P01877 340 aa9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 POLR3DP05423 398 aaPredicted RBP9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 XRCC5P13010 732 aaKnown RBP9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 CAPN2P17655 700 aa9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 ERVK-9P63128 1117 aa9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 ERVK-24P63145 666 aa9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 IRX3P78415 501 aaPredicted RBP9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 SEPT2Q15019 361 aa9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 UBE3CQ15386 1083 aa9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 C12orf60Q5U649 245 aa9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 LBX2Q6XYB7 198 aa9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 SLC44A5Q8NCS7 719 aa9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 DYNLL2Q96FJ2 89 aa9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 CRNKL1Q9BZJ0 848 aaKnown RBP9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 LRRCC1Q9C099 1032 aa9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 PRO3102Q9H379 93 aa9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 ARMT1Q9H993 441 aa9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 MCM9Q9NXL9 1143 aa9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 RABGAP1Q9Y3P9 1069 aa9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 PCDHB15Q9Y5E8 787 aa9.66□□□□□ -0.86
NPIPB4-212ENST00000540103 MYH7P12883 1935 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 USP17L15C9J2P7 530 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 USP17L13C9JLJ4 530 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 USP17L11C9JVI0 530 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 USP17L18D6R9N7 530 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 USP17L22D6RA61 530 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 USP17L17D6RBQ6 530 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 USP17L19D6RCP7 530 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 USP17L20D6RJB6 530 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 ABCB7O75027 752 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 VCAM1P19320 739 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 USP17L24Q0WX57 530 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 RAB3GAP1Q15042 981 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 GTF3C2Q8WUA4 911 aaPredicted RBP9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 TRIB2Q92519 343 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 GCC1Q96CN9 775 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 DEFB118Q96PH6 123 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 TRIM34Q9BYJ4 488 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 PUS7LQ9H0K6 701 aaKnown RBP9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 CABP5Q9NP86 173 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 ATP8A2Q9NTI2 1148 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 BTBD7Q9P203 1132 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 TAOK2Q9UL54 1235 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 COLQQ9Y215 455 aaPredicted RBP9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 NAV1Q8NEY1 1877 aa9.65□□□□□ -0.86
NPIPB4-212ENST00000540103 CEP290O15078 2479 aa9.64□□□□□ -0.87
NPIPB4-212ENST00000540103 RPTORQ8N122 1335 aa9.64□□□□□ -0.87
NPIPB4-212ENST00000540103 CYP2D7A0A087X1C5 515 aa9.64□□□□□ -0.87
NPIPB4-212ENST00000540103 SPDYE16A6NNV3 312 aaPredicted RBP9.64□□□□□ -0.87
NPIPB4-212ENST00000540103 USP17L12C9JPN9 530 aa9.64□□□□□ -0.87
NPIPB4-212ENST00000540103 USP17L21D6R901 530 aa9.64□□□□□ -0.87
NPIPB4-212ENST00000540103 FARP2O94887 1054 aaPredicted RBP9.64□□□□□ -0.87
NPIPB4-212ENST00000540103 MBD4O95243 580 aa9.64□□□□□ -0.87
NPIPB4-212ENST00000540103 HMGCRP04035 888 aa9.64□□□□□ -0.87
NPIPB4-212ENST00000540103 AKR1B1P15121 316 aa9.64□□□□□ -0.87
NPIPB4-212ENST00000540103 CYP2B6P20813 491 aa9.64□□□□□ -0.87
NPIPB4-212ENST00000540103 MAPK4P31152 587 aa9.64□□□□□ -0.87
NPIPB4-212ENST00000540103 USP14P54578 494 aa9.64□□□□□ -0.87
NPIPB4-212ENST00000540103 GPR142Q7Z601 462 aa9.64□□□□□ -0.87
NPIPB4-212ENST00000540103 STRBPQ96SI9 672 aaKnown RBP9.64□□□□□ -0.87
NPIPB4-212ENST00000540103 NUDT12Q9BQG2 462 aa9.64□□□□□ -0.87
NPIPB4-212ENST00000540103 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.64□□□□□ -0.87
NPIPB4-212ENST00000540103 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.64□□□□□ -0.87
NPIPB4-212ENST00000540103 RWDD1Q9H446 243 aaPredicted RBP9.64□□□□□ -0.87
NPIPB4-212ENST00000540103 ECHDC1Q9NTX5 307 aa9.64□□□□□ -0.87
NPIPB4-212ENST00000540103 ALPK3Q96L96 1907 aa9.64□□□□□ -0.87
NPIPB4-212ENST00000540103 TFRCP02786 760 aaKnown RBP9.63□□□□□ -0.87
NPIPB4-212ENST00000540103 CDK8P49336 464 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms