RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.06□□□□□ -1.12
CDH19-203ENST00000540086 TRIM34Q9BYJ4 488 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 TMEM39BQ9GZU3 492 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 KAT14Q9H8E8 782 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 TCP11L1Q9NUJ3 509 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 MTMR6Q9Y217 621 aa8.06□□□□□ -1.12
CDH19-203ENST00000540086 LAMB1P07942 1786 aa8.05□□□□□ -1.12
CDH19-203ENST00000540086 NID2Q14112 1375 aa8.05□□□□□ -1.12
CDH19-203ENST00000540086 MPHOSPH10O00566 681 aaKnown RBP8.05□□□□□ -1.12
CDH19-203ENST00000540086 DDAH1O94760 285 aa8.05□□□□□ -1.12
CDH19-203ENST00000540086 PDCP20941 246 aa8.05□□□□□ -1.12
CDH19-203ENST00000540086 TROAPQ12815 778 aa8.05□□□□□ -1.12
CDH19-203ENST00000540086 GPR162Q16538 588 aa8.05□□□□□ -1.12
CDH19-203ENST00000540086 SHROOM1Q2M3G4 852 aaPredicted RBP8.05□□□□□ -1.12
CDH19-203ENST00000540086 KIF4BQ2VIQ3 1234 aa8.05□□□□□ -1.12
CDH19-203ENST00000540086 FOXD4L6Q3SYB3 417 aaPredicted RBP8.05□□□□□ -1.12
CDH19-203ENST00000540086 CCDC178Q5BJE1 867 aa8.05□□□□□ -1.12
CDH19-203ENST00000540086 C9orf131Q5VYM1 1079 aa8.05□□□□□ -1.12
CDH19-203ENST00000540086 CPLX2Q6PUV4 134 aaKnown RBP8.05□□□□□ -1.12
CDH19-203ENST00000540086 FOXD4L3Q6VB84 417 aaPredicted RBP8.05□□□□□ -1.12
CDH19-203ENST00000540086 CDC37L1Q7L3B6 337 aa8.05□□□□□ -1.12
CDH19-203ENST00000540086 CLEC10AQ8IUN9 316 aa8.05□□□□□ -1.12
CDH19-203ENST00000540086 CCDC82Q8N4S0 544 aa8.05□□□□□ -1.12
CDH19-203ENST00000540086 FAM151AQ8WW52 585 aa8.05□□□□□ -1.12
CDH19-203ENST00000540086 CEP95Q96GE4 821 aa8.05□□□□□ -1.12
CDH19-203ENST00000540086 TMEM47Q9BQJ4 181 aa8.05□□□□□ -1.12
CDH19-203ENST00000540086 ORC3Q9UBD5 711 aaPredicted RBP8.05□□□□□ -1.12
CDH19-203ENST00000540086 MTMR7Q9Y216 660 aa8.05□□□□□ -1.12
CDH19-203ENST00000540086 ATRNL1Q5VV63 1379 aa8.05□□□□□ -1.12
CDH19-203ENST00000540086 UBE2Q2LH0YL09 131 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 CDKL5O76039 1030 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 DDNO94850 711 aaPredicted RBP8.04□□□□□ -1.12
CDH19-203ENST00000540086 BAG4O95429 457 aaKnown RBP8.04□□□□□ -1.12
CDH19-203ENST00000540086 F13A1P00488 732 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 MCM4P33991 863 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 RCAN1P53805 252 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 NTRK3Q16288 839 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 FKBP1CQ5VVH2 108 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 FERMT3Q86UX7 667 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 FOXP4Q8IVH2 680 aaPredicted RBP8.04□□□□□ -1.12
CDH19-203ENST00000540086 GPC2Q8N158 579 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 PNMA1Q8ND90 353 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 TRPM4Q8TD43 1214 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 ANKS1AQ92625 1134 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 AIFM3Q96NN9 605 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 GBP4Q96PP9 640 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 SLC26A6Q9BXS9 759 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 KIF3AQ9Y496 699 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 ARFGEF1Q9Y6D6 1849 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 PLIN4Q96Q06 1357 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 IGKV6D-41A0A0C4DH26 115 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 CCDC196A0A1B0GTZ2 297 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 H3BQV1 296 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 H7C1D1 291 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 GDF11O95390 407 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 PLEKHA8P1O95397 391 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 CALM1P0DP23 149 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 CALM2P0DP24 149 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 CALM3P0DP25 149 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 IFNAR1P17181 557 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 EPS15P42566 896 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 MMP14P50281 582 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 GUCY1B3Q02153 619 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 CERKLQ49MI3 558 aaPredicted RBP8.04□□□□□ -1.12
CDH19-203ENST00000540086 IFFO2Q5TF58 517 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 OTUD7BQ6GQQ9 843 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 RASGRP2Q7LDG7 609 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 MTMR4Q9NYA4 1195 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 GPRC5DQ9NZD1 345 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 PSME4Q14997 1843 aa8.04□□□□□ -1.12
CDH19-203ENST00000540086 COL2A1P02458 1487 aaPredicted RBP8.04□□□□□ -1.12
CDH19-203ENST00000540086 SSRP1Q08945 709 aaKnown RBP8.03□□□□□ -1.12
CDH19-203ENST00000540086 RASA3Q14644 834 aa8.03□□□□□ -1.12
CDH19-203ENST00000540086 RRP1BQ14684 758 aaKnown RBP8.03□□□□□ -1.12
CDH19-203ENST00000540086 TATDN1Q6P1N9 297 aa8.03□□□□□ -1.12
CDH19-203ENST00000540086 CLEC17AQ6ZS10 378 aa8.03□□□□□ -1.12
CDH19-203ENST00000540086 TMTC3Q6ZXV5 915 aa8.03□□□□□ -1.12
CDH19-203ENST00000540086 FAM83AQ86UY5 434 aa8.03□□□□□ -1.12
CDH19-203ENST00000540086 METTL16Q86W50 562 aaKnown RBP8.03□□□□□ -1.12
CDH19-203ENST00000540086 LRRC47Q8N1G4 583 aaKnown RBP8.03□□□□□ -1.12
CDH19-203ENST00000540086 CTCFLQ8NI51 663 aaPredicted RBP8.03□□□□□ -1.12
CDH19-203ENST00000540086 CCDC17Q96LX7 622 aa8.03□□□□□ -1.12
CDH19-203ENST00000540086 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.03□□□□□ -1.12
CDH19-203ENST00000540086 GJB4Q9NTQ9 266 aa8.03□□□□□ -1.12
CDH19-203ENST00000540086 HACL1Q9UJ83 578 aa8.03□□□□□ -1.12
CDH19-203ENST00000540086 CDK5RAP2Q96SN8 1893 aa8.03□□□□□ -1.12
CDH19-203ENST00000540086 hCG_1642624A0A1W2PR95 340 aa8.02□□□□□ -1.12
CDH19-203ENST00000540086 CAPN15O75808 1086 aa8.02□□□□□ -1.12
CDH19-203ENST00000540086 FMNL1O95466 1100 aaPredicted RBP8.02□□□□□ -1.12
CDH19-203ENST00000540086 TOP1P11387 765 aaKnown RBP8.02□□□□□ -1.12
CDH19-203ENST00000540086 GUCY1A2P33402 732 aa8.02□□□□□ -1.12
CDH19-203ENST00000540086 NOVP48745 357 aa8.02□□□□□ -1.12
CDH19-203ENST00000540086 TNNI2P48788 182 aa8.02□□□□□ -1.12
CDH19-203ENST00000540086 JAG1P78504 1218 aa8.02□□□□□ -1.12
CDH19-203ENST00000540086 ATP2B2Q01814 1243 aa8.02□□□□□ -1.12
CDH19-203ENST00000540086 FUT2Q10981 343 aa8.02□□□□□ -1.12
CDH19-203ENST00000540086 MCTP1Q6DN14 999 aa8.02□□□□□ -1.12
CDH19-203ENST00000540086 MIGA2Q7L4E1 593 aa8.02□□□□□ -1.12
CDH19-203ENST00000540086 NBPF11Q86T75 865 aa8.02□□□□□ -1.12
CDH19-203ENST00000540086 C8orf76Q96K31 380 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms