RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 CALML3P27482 149 aa11.72□□□□□ -0.53
SPARC-209ENST00000539687 KRT2P35908 639 aa11.72□□□□□ -0.53
SPARC-209ENST00000539687 HDLBPQ00341 1268 aaKnown RBP11.72□□□□□ -0.53
SPARC-209ENST00000539687 TFAP4Q01664 338 aa11.72□□□□□ -0.53
SPARC-209ENST00000539687 TYRO3Q06418 890 aa11.72□□□□□ -0.53
SPARC-209ENST00000539687 SLC15A2Q16348 729 aa11.72□□□□□ -0.53
SPARC-209ENST00000539687 STX1AQ16623 288 aa11.72□□□□□ -0.53
SPARC-209ENST00000539687 GALNT17Q6IS24 598 aa11.72□□□□□ -0.53
SPARC-209ENST00000539687 HHIPL2Q6UWX4 724 aa11.72□□□□□ -0.53
SPARC-209ENST00000539687 C16orf86Q6ZW13 317 aa11.72□□□□□ -0.53
SPARC-209ENST00000539687 DIS3L2Q8IYB7 885 aaKnown RBP11.72□□□□□ -0.53
SPARC-209ENST00000539687 TGFBRAP1Q8WUH2 860 aa11.72□□□□□ -0.53
SPARC-209ENST00000539687 SH3GLB2Q9NR46 395 aa11.72□□□□□ -0.53
SPARC-209ENST00000539687 ANO10Q9NW15 660 aa11.72□□□□□ -0.53
SPARC-209ENST00000539687 SWAP70Q9UH65 585 aa11.72□□□□□ -0.53
SPARC-209ENST00000539687 PCDHA7Q9UN72 937 aa11.72□□□□□ -0.53
SPARC-209ENST00000539687 BAZ2AQ9UIF9 1905 aaKnown RBP11.72□□□□□ -0.53
SPARC-209ENST00000539687 FLT1P17948 1338 aa11.71□□□□□ -0.53
SPARC-209ENST00000539687 CYP2D7A0A087X1C5 515 aa11.71□□□□□ -0.53
SPARC-209ENST00000539687 FAM237AA0A1B0GTK4 181 aa11.71□□□□□ -0.53
SPARC-209ENST00000539687 PRDM1O75626 825 aa11.71□□□□□ -0.53
SPARC-209ENST00000539687 USP17L8P0C7I0 530 aa11.71□□□□□ -0.53
SPARC-209ENST00000539687 SMARCA1P28370 1054 aa11.71□□□□□ -0.53
SPARC-209ENST00000539687 TRAPPC10P48553 1259 aa11.71□□□□□ -0.53
SPARC-209ENST00000539687 GTF2IP78347 998 aa11.71□□□□□ -0.53
SPARC-209ENST00000539687 DIXDC1Q155Q3 683 aa11.71□□□□□ -0.53
SPARC-209ENST00000539687 OTUD7BQ6GQQ9 843 aa11.71□□□□□ -0.53
SPARC-209ENST00000539687 ELOA2Q8IYF1 753 aaPredicted RBP11.71□□□□□ -0.53
SPARC-209ENST00000539687 STK11IPQ8N1F8 1099 aa11.71□□□□□ -0.53
SPARC-209ENST00000539687 ZNF784Q8NCA9 323 aaPredicted RBP11.71□□□□□ -0.53
SPARC-209ENST00000539687 RNF214Q8ND24 703 aa11.71□□□□□ -0.53
SPARC-209ENST00000539687 ENGASEQ8NFI3 743 aa11.71□□□□□ -0.53
SPARC-209ENST00000539687 CCDC148Q8NFR7 591 aa11.71□□□□□ -0.53
SPARC-209ENST00000539687 NKX2-3Q8TAU0 364 aa11.71□□□□□ -0.53
SPARC-209ENST00000539687 FAM13BQ9NYF5 915 aa11.71□□□□□ -0.53
SPARC-209ENST00000539687 JAG2Q9Y219 1238 aa11.71□□□□□ -0.53
SPARC-209ENST00000539687 CLIC4Q9Y696 253 aa11.71□□□□□ -0.53
SPARC-209ENST00000539687 MYH2Q9UKX2 1941 aa11.7□□□□□ -0.54
SPARC-209ENST00000539687 PLIN4Q96Q06 1357 aa11.7□□□□□ -0.54
SPARC-209ENST00000539687 ECM29Q5VYK3 1845 aa11.7□□□□□ -0.54
SPARC-209ENST00000539687 CNTNAP5Q8WYK1 1306 aa11.7□□□□□ -0.54
SPARC-209ENST00000539687 DDX60LQ5H9U9 1706 aaKnown RBP11.7□□□□□ -0.54
SPARC-209ENST00000539687 GOLGA6L6A8MZA4 724 aa11.7□□□□□ -0.54
SPARC-209ENST00000539687 KIF28PB7ZC32 967 aa11.7□□□□□ -0.54
SPARC-209ENST00000539687 HLA-DOAP06340 250 aa11.7□□□□□ -0.54
SPARC-209ENST00000539687 GRM4Q14833 912 aa11.7□□□□□ -0.54
SPARC-209ENST00000539687 TPRNQ4KMQ1 711 aa11.7□□□□□ -0.54
SPARC-209ENST00000539687 MAPKAPK5Q8IW41 473 aa11.7□□□□□ -0.54
SPARC-209ENST00000539687 FMR1NBQ8N0W7 255 aaPredicted RBP11.7□□□□□ -0.54
SPARC-209ENST00000539687 KRI1Q8N9T8 703 aaKnown RBP11.7□□□□□ -0.54
SPARC-209ENST00000539687 ZNF579Q8NAF0 562 aaKnown RBP11.7□□□□□ -0.54
SPARC-209ENST00000539687 PNMA1Q8ND90 353 aa11.7□□□□□ -0.54
SPARC-209ENST00000539687 NEDD1Q8NHV4 660 aa11.7□□□□□ -0.54
SPARC-209ENST00000539687 CCDC12Q8WUD4 166 aaPredicted RBP11.7□□□□□ -0.54
SPARC-209ENST00000539687 ZNF622Q969S3 477 aaKnown RBP eCLIP11.7□□□□□ -0.54
SPARC-209ENST00000539687 TEKT1Q969V4 418 aa11.7□□□□□ -0.54
SPARC-209ENST00000539687 SDF4Q9BRK5 362 aa11.7□□□□□ -0.54
SPARC-209ENST00000539687 PYM1Q9BRP8 204 aaKnown RBP11.7□□□□□ -0.54
SPARC-209ENST00000539687 PHF20Q9BVI0 1012 aa11.7□□□□□ -0.54
SPARC-209ENST00000539687 DAGLAQ9Y4D2 1042 aa11.7□□□□□ -0.54
SPARC-209ENST00000539687 COL11A2P13942 1736 aaPredicted RBP11.69□□□□□ -0.54
SPARC-209ENST00000539687 ESPNB1AK53 854 aa11.69□□□□□ -0.54
SPARC-209ENST00000539687 hCG_1984214I3L0E3 225 aa11.69□□□□□ -0.54
SPARC-209ENST00000539687 PPFIA3O75145 1194 aa11.69□□□□□ -0.54
SPARC-209ENST00000539687 CYP2D6P10635 497 aa11.69□□□□□ -0.54
SPARC-209ENST00000539687 SCG2P13521 617 aa11.69□□□□□ -0.54
SPARC-209ENST00000539687 MSNP26038 577 aaKnown RBP11.69□□□□□ -0.54
SPARC-209ENST00000539687 RHBDL3P58872 404 aa11.69□□□□□ -0.54
SPARC-209ENST00000539687 FUT2Q10981 343 aa11.69□□□□□ -0.54
SPARC-209ENST00000539687 SNW1Q13573 536 aaKnown RBP11.69□□□□□ -0.54
SPARC-209ENST00000539687 PTPAQ15257 358 aa11.69□□□□□ -0.54
SPARC-209ENST00000539687 CAMK4Q16566 473 aa11.69□□□□□ -0.54
SPARC-209ENST00000539687 PFKFB3Q16875 520 aaPredicted RBP11.69□□□□□ -0.54
SPARC-209ENST00000539687 FAM47AQ5JRC9 791 aa11.69□□□□□ -0.54
SPARC-209ENST00000539687 STRIP1Q5VSL9 837 aa11.69□□□□□ -0.54
SPARC-209ENST00000539687 ZSCAN30Q86W11 494 aa11.69□□□□□ -0.54
SPARC-209ENST00000539687 ZNF713Q8N859 430 aaPredicted RBP11.69□□□□□ -0.54
SPARC-209ENST00000539687 SLC16A10Q8TF71 515 aa11.69□□□□□ -0.54
SPARC-209ENST00000539687 AIFM3Q96NN9 605 aa11.69□□□□□ -0.54
SPARC-209ENST00000539687 GPR101Q96P66 508 aaPredicted RBP11.69□□□□□ -0.54
SPARC-209ENST00000539687 USP25Q9UHP3 1055 aa11.69□□□□□ -0.54
SPARC-209ENST00000539687 TTF2Q9UNY4 1162 aaKnown RBP11.69□□□□□ -0.54
SPARC-209ENST00000539687 MRVI1Q9Y6F6 885 aa11.69□□□□□ -0.54
SPARC-209ENST00000539687 BTBD18B2RXH4 712 aa11.68□□□□□ -0.54
SPARC-209ENST00000539687 GOLGA6L19H0YKK7 550 aa11.68□□□□□ -0.54
SPARC-209ENST00000539687 RIMBP2O15034 1052 aa11.68□□□□□ -0.54
SPARC-209ENST00000539687 PTMAP06454 111 aaKnown RBP11.68□□□□□ -0.54
SPARC-209ENST00000539687 TOP1P11387 765 aaKnown RBP11.68□□□□□ -0.54
SPARC-209ENST00000539687 RASA1P20936 1047 aa11.68□□□□□ -0.54
SPARC-209ENST00000539687 SYKP43405 635 aa11.68□□□□□ -0.54
SPARC-209ENST00000539687 CDK8P49336 464 aa11.68□□□□□ -0.54
SPARC-209ENST00000539687 TPM4P67936 248 aa11.68□□□□□ -0.54
SPARC-209ENST00000539687 KANK3Q6NY19 840 aa11.68□□□□□ -0.54
SPARC-209ENST00000539687 CEP57L1Q8IYX8 460 aa11.68□□□□□ -0.54
SPARC-209ENST00000539687 FBXW7Q969H0 707 aa11.68□□□□□ -0.54
SPARC-209ENST00000539687 FERMT2Q96AC1 680 aa11.68□□□□□ -0.54
SPARC-209ENST00000539687 FTOQ9C0B1 505 aaKnown RBP eCLIP11.68□□□□□ -0.54
SPARC-209ENST00000539687 VPS33BQ9H267 617 aa11.68□□□□□ -0.54
SPARC-209ENST00000539687 DHX36Q9H2U1 1008 aaKnown RBP11.68□□□□□ -0.54
SPARC-209ENST00000539687 V9GY48 417 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms