RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 CCAR2Q8N163 923 aaKnown RBP28.52■■■□□ 2.16
RAB40C-204ENST00000538492 ZNF579Q8NAF0 562 aaKnown RBP28.52■■■□□ 2.16
RAB40C-204ENST00000538492 PDS5AQ29RF7 1337 aaKnown RBP28.52■■■□□ 2.16
RAB40C-204ENST00000538492 PTPN14Q15678 1187 aa28.52■■■□□ 2.16
RAB40C-204ENST00000538492 PTPN21Q16825 1174 aa28.52■■■□□ 2.16
RAB40C-204ENST00000538492 ZNF827Q17R98 1081 aa28.52■■■□□ 2.16
RAB40C-204ENST00000538492 DZIP1Q86YF9 867 aaKnown RBP28.52■■■□□ 2.16
RAB40C-204ENST00000538492 ATP8A2Q9NTI2 1148 aa28.52■■■□□ 2.16
RAB40C-204ENST00000538492 WNT7AO00755 349 aa28.51■■■□□ 2.15
RAB40C-204ENST00000538492 ORC4O43929 436 aa28.51■■■□□ 2.15
RAB40C-204ENST00000538492 DDAH1O94760 285 aa28.51■■■□□ 2.15
RAB40C-204ENST00000538492 SRBD1Q8N5C6 995 aaKnown RBP28.51■■■□□ 2.15
RAB40C-204ENST00000538492 CCDC150Q8NCX0 1101 aa28.51■■■□□ 2.15
RAB40C-204ENST00000538492 DLEC1Q9Y238 1755 aa28.51■■■□□ 2.15
RAB40C-204ENST00000538492 CFAP100Q494V2 611 aa28.51■■■□□ 2.15
RAB40C-204ENST00000538492 ANKIB1Q9P2G1 1089 aa28.51■■■□□ 2.15
RAB40C-204ENST00000538492 CCDC88AQ3V6T2 1871 aa28.5■■■□□ 2.15
RAB40C-204ENST00000538492 NYAP1Q6ZVC0 841 aa28.5■■■□□ 2.15
RAB40C-204ENST00000538492 CTCFLQ8NI51 663 aaPredicted RBP28.5■■■□□ 2.15
RAB40C-204ENST00000538492 MCM9Q9NXL9 1143 aa28.5■■■□□ 2.15
RAB40C-204ENST00000538492 PAXBP1Q9Y5B6 917 aa28.5■■■□□ 2.15
RAB40C-204ENST00000538492 ELOA2Q8IYF1 753 aaPredicted RBP28.5■■■□□ 2.15
RAB40C-204ENST00000538492 CNTNAP5Q8WYK1 1306 aa28.49■■■□□ 2.15
RAB40C-204ENST00000538492 TSPY2A6NKD2 308 aa28.49■■■□□ 2.15
RAB40C-204ENST00000538492 CTIFO43310 598 aaKnown RBP28.49■■■□□ 2.15
RAB40C-204ENST00000538492 USP17L8P0C7I0 530 aa28.49■■■□□ 2.15
RAB40C-204ENST00000538492 SMARCE1Q969G3 411 aa28.49■■■□□ 2.15
RAB40C-204ENST00000538492 EPSTI1Q96J88 318 aa28.49■■■□□ 2.15
RAB40C-204ENST00000538492 ARPP21Q9UBL0 812 aaPredicted RBP28.49■■■□□ 2.15
RAB40C-204ENST00000538492 ACTN4O43707 911 aaKnown RBP28.49■■■□□ 2.15
RAB40C-204ENST00000538492 LAMB1P07942 1786 aa28.49■■■□□ 2.15
RAB40C-204ENST00000538492 CCDC112Q8NEF3 446 aa28.48■■■□□ 2.15
RAB40C-204ENST00000538492 NPY5RQ15761 445 aa28.48■■■□□ 2.15
RAB40C-204ENST00000538492 DHX58Q96C10 678 aa28.48■■■□□ 2.15
RAB40C-204ENST00000538492 BCL11BQ9C0K0 894 aaPredicted RBP28.48■■■□□ 2.15
RAB40C-204ENST00000538492 BRMS1Q9HCU9 246 aa28.48■■■□□ 2.15
RAB40C-204ENST00000538492 TNRC6CQ9HCJ0 1690 aaKnown RBP28.47■■■□□ 2.15
RAB40C-204ENST00000538492 RFC4P35249 363 aa28.47■■■□□ 2.15
RAB40C-204ENST00000538492 ZNF174Q15697 407 aa28.47■■■□□ 2.15
RAB40C-204ENST00000538492 A0A087X0B3 334 aa28.47■■■□□ 2.15
RAB40C-204ENST00000538492 E4F1Q66K89 784 aaPredicted RBP28.47■■■□□ 2.15
RAB40C-204ENST00000538492 IRS2Q9Y4H2 1338 aa28.46■■■□□ 2.15
RAB40C-204ENST00000538492 TMEM232C9JQI7 657 aa28.46■■■□□ 2.15
RAB40C-204ENST00000538492 VEGFAP15692 232 aaPredicted RBP28.46■■■□□ 2.15
RAB40C-204ENST00000538492 SARSP49591 514 aaKnown RBP28.46■■■□□ 2.15
RAB40C-204ENST00000538492 FMR1Q06787 632 aaKnown RBP eCLIP28.46■■■□□ 2.15
RAB40C-204ENST00000538492 NT5DC1Q5TFE4 455 aa28.46■■■□□ 2.15
RAB40C-204ENST00000538492 KIAA1551Q9HCM1 1747 aa28.46■■■□□ 2.15
RAB40C-204ENST00000538492 CBFA2T2O43439 604 aa28.46■■■□□ 2.15
RAB40C-204ENST00000538492 NFIXQ14938 502 aa28.46■■■□□ 2.15
RAB40C-204ENST00000538492 TRMT44Q8IYL2 757 aaKnown RBP28.46■■■□□ 2.15
RAB40C-204ENST00000538492 SBK1Q52WX2 424 aa28.45■■■□□ 2.15
RAB40C-204ENST00000538492 TNFRSF25Q93038 417 aa28.45■■■□□ 2.15
RAB40C-204ENST00000538492 GPR101Q96P66 508 aaPredicted RBP28.45■■■□□ 2.15
RAB40C-204ENST00000538492 USP21Q9UK80 565 aa28.45■■■□□ 2.15
RAB40C-204ENST00000538492 MORC3Q14149 939 aa28.45■■■□□ 2.14
RAB40C-204ENST00000538492 SPTY2D1Q68D10 685 aaPredicted RBP28.44■■■□□ 2.14
RAB40C-204ENST00000538492 RCSD1Q6JBY9 416 aa28.44■■■□□ 2.14
RAB40C-204ENST00000538492 SYMPKQ92797 1274 aaKnown RBP28.44■■■□□ 2.14
RAB40C-204ENST00000538492 MAST2Q6P0Q8 1798 aa28.44■■■□□ 2.14
RAB40C-204ENST00000538492 AFMP43652 599 aa28.44■■■□□ 2.14
RAB40C-204ENST00000538492 USP5P45974 858 aa28.44■■■□□ 2.14
RAB40C-204ENST00000538492 KANK3Q6NY19 840 aa28.44■■■□□ 2.14
RAB40C-204ENST00000538492 DYNLL2Q96FJ2 89 aa28.44■■■□□ 2.14
RAB40C-204ENST00000538492 NFE2L3Q9Y4A8 694 aa28.44■■■□□ 2.14
RAB40C-204ENST00000538492 LDHBP07195 334 aaKnown RBP28.43■■■□□ 2.14
RAB40C-204ENST00000538492 GOLGA8FQ08AF8 430 aa28.43■■■□□ 2.14
RAB40C-204ENST00000538492 GOLGA8DPQ0D2H9 430 aa28.43■■■□□ 2.14
RAB40C-204ENST00000538492 DIXDC1Q155Q3 683 aa28.43■■■□□ 2.14
RAB40C-204ENST00000538492 MLKLQ8NB16 471 aa28.43■■■□□ 2.14
RAB40C-204ENST00000538492 SCG2P13521 617 aa28.43■■■□□ 2.14
RAB40C-204ENST00000538492 CASP1P29466 404 aa28.43■■■□□ 2.14
RAB40C-204ENST00000538492 NLRP5P59047 1200 aa28.43■■■□□ 2.14
RAB40C-204ENST00000538492 GRIK5Q16478 980 aa28.43■■■□□ 2.14
RAB40C-204ENST00000538492 TTC38Q5R3I4 469 aa28.43■■■□□ 2.14
RAB40C-204ENST00000538492 TRAPPC3LQ5T215 181 aa28.43■■■□□ 2.14
RAB40C-204ENST00000538492 FNBP4Q8N3X1 1017 aaPredicted RBP28.43■■■□□ 2.14
RAB40C-204ENST00000538492 SH3RF3Q8TEJ3 882 aaPredicted RBP28.43■■■□□ 2.14
RAB40C-204ENST00000538492 KCND1Q9NSA2 647 aa28.43■■■□□ 2.14
RAB40C-204ENST00000538492 ADAMTS3O15072 1205 aa28.42■■■□□ 2.14
RAB40C-204ENST00000538492 TFAP4Q01664 338 aa28.42■■■□□ 2.14
RAB40C-204ENST00000538492 VSTM4Q8IW00 320 aa28.42■■■□□ 2.14
RAB40C-204ENST00000538492 INTS13Q9NVM9 706 aa28.42■■■□□ 2.14
RAB40C-204ENST00000538492 GLIPR1L2Q4G1C9 344 aa28.42■■■□□ 2.14
RAB40C-204ENST00000538492 PIK3AP1Q6ZUJ8 805 aa28.42■■■□□ 2.14
RAB40C-204ENST00000538492 VWA3AA6NCI4 1184 aa28.41■■■□□ 2.14
RAB40C-204ENST00000538492 UBAP1LF5GYI3 381 aa28.41■■■□□ 2.14
RAB40C-204ENST00000538492 PTGDRQ13258 359 aa28.41■■■□□ 2.14
RAB40C-204ENST00000538492 NAA30Q147X3 362 aaPredicted RBP28.41■■■□□ 2.14
RAB40C-204ENST00000538492 PPP1R13BQ96KQ4 1090 aa28.41■■■□□ 2.14
RAB40C-204ENST00000538492 NHSQ6T4R5 1651 aa28.41■■■□□ 2.14
RAB40C-204ENST00000538492 NRDCO43847 1150 aa28.41■■■□□ 2.14
RAB40C-204ENST00000538492 GRAPQ13588 217 aa28.41■■■□□ 2.14
RAB40C-204ENST00000538492 GRAPLQ8TC17 118 aaPredicted RBP28.41■■■□□ 2.14
RAB40C-204ENST00000538492 TAF1LQ8IZX4 1826 aa28.4■■■□□ 2.14
RAB40C-204ENST00000538492 TOP1P11387 765 aaKnown RBP28.4■■■□□ 2.14
RAB40C-204ENST00000538492 CDK11BP21127 795 aaKnown RBP28.4■■■□□ 2.14
RAB40C-204ENST00000538492 FAM196AQ6ZSG2 479 aa28.4■■■□□ 2.14
RAB40C-204ENST00000538492 FERMT2Q96AC1 680 aa28.4■■■□□ 2.14
RAB40C-204ENST00000538492 MED15Q96RN5 788 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms