RNA–Protein interactions for RNA: ENST00000536003.5

PAAF1-207, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-207ENST00000536003 VCAM1P19320 739 aa18.54■□□□□ 0.56
PAAF1-207ENST00000536003 RRP1P56182 461 aaKnown RBP18.54■□□□□ 0.56
PAAF1-207ENST00000536003 UBXN2AP68543 259 aa18.54■□□□□ 0.56
PAAF1-207ENST00000536003 SEPT2Q15019 361 aa18.54■□□□□ 0.56
PAAF1-207ENST00000536003 CLEC10AQ8IUN9 316 aa18.54■□□□□ 0.56
PAAF1-207ENST00000536003 PXYLP1Q8TE99 480 aa18.54■□□□□ 0.56
PAAF1-207ENST00000536003 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.54■□□□□ 0.56
PAAF1-207ENST00000536003 PUS7LQ9H0K6 701 aaKnown RBP18.54■□□□□ 0.56
PAAF1-207ENST00000536003 ECHDC1Q9NTX5 307 aa18.54■□□□□ 0.56
PAAF1-207ENST00000536003 RBPJLQ9UBG7 517 aa18.54■□□□□ 0.56
PAAF1-207ENST00000536003 GJB1P08034 283 aa18.53■□□□□ 0.56
PAAF1-207ENST00000536003 GJA8P48165 433 aa18.53■□□□□ 0.56
PAAF1-207ENST00000536003 UBE3CQ15386 1083 aa18.53■□□□□ 0.56
PAAF1-207ENST00000536003 KIAA1683Q9H0B3 1180 aa18.53■□□□□ 0.56
PAAF1-207ENST00000536003 GJD2Q9UKL4 321 aa18.53■□□□□ 0.56
PAAF1-207ENST00000536003 GREB1LQ9C091 1923 aaPredicted RBP18.53■□□□□ 0.56
PAAF1-207ENST00000536003 A0A1W2PRG0 241 aa18.52■□□□□ 0.56
PAAF1-207ENST00000536003 SLC34A2O95436 690 aa18.52■□□□□ 0.56
PAAF1-207ENST00000536003 Q3C1V9 767 aa18.52■□□□□ 0.56
PAAF1-207ENST00000536003 U2AF1L4Q8WU68 220 aaKnown RBP18.52■□□□□ 0.56
PAAF1-207ENST00000536003 PAGR1Q9BTK6 254 aa18.52■□□□□ 0.56
PAAF1-207ENST00000536003 PORCNQ9H237 461 aa18.52■□□□□ 0.56
PAAF1-207ENST00000536003 ALPK3Q96L96 1907 aa18.52■□□□□ 0.56
PAAF1-207ENST00000536003 MPHOSPH10O00566 681 aaKnown RBP18.52■□□□□ 0.55
PAAF1-207ENST00000536003 ERVK-9P63128 1117 aa18.52■□□□□ 0.55
PAAF1-207ENST00000536003 ERVK-24P63145 666 aa18.52■□□□□ 0.55
PAAF1-207ENST00000536003 TRIM32Q13049 653 aa18.52■□□□□ 0.55
PAAF1-207ENST00000536003 UBE2Q1Q7Z7E8 422 aa18.52■□□□□ 0.55
PAAF1-207ENST00000536003 GPRC5AQ8NFJ5 357 aa18.52■□□□□ 0.55
PAAF1-207ENST00000536003 OTUD7AQ8TE49 926 aaPredicted RBP18.52■□□□□ 0.55
PAAF1-207ENST00000536003 CABP5Q9NP86 173 aa18.52■□□□□ 0.55
PAAF1-207ENST00000536003 SZT2Q5T011 3432 aa18.52■□□□□ 0.55
PAAF1-207ENST00000536003 CNMDO75829 334 aa18.51■□□□□ 0.55
PAAF1-207ENST00000536003 ATP8A2Q9NTI2 1148 aa18.51■□□□□ 0.55
PAAF1-207ENST00000536003 AKR1B1P15121 316 aa18.5■□□□□ 0.55
PAAF1-207ENST00000536003 KIAA1755Q5JYT7 1200 aa18.5■□□□□ 0.55
PAAF1-207ENST00000536003 TRIB2Q92519 343 aa18.5■□□□□ 0.55
PAAF1-207ENST00000536003 YTHDC1Q96MU7 727 aaKnown RBP18.5■□□□□ 0.55
PAAF1-207ENST00000536003 PAK6Q9NQU5 681 aaPredicted RBP18.5■□□□□ 0.55
PAAF1-207ENST00000536003 SLC4A4Q9Y6R1 1079 aa18.5■□□□□ 0.55
PAAF1-207ENST00000536003 DNAH12Q6ZR08 3092 aa18.49■□□□□ 0.55
PAAF1-207ENST00000536003 COL11A1P12107 1806 aaPredicted RBP18.49■□□□□ 0.55
PAAF1-207ENST00000536003 FRMPD3Q5JV73 1810 aa18.49■□□□□ 0.55
PAAF1-207ENST00000536003 USP17L12C9JPN9 530 aa18.49■□□□□ 0.55
PAAF1-207ENST00000536003 USP17L21D6R901 530 aa18.49■□□□□ 0.55
PAAF1-207ENST00000536003 USP14P54578 494 aa18.49■□□□□ 0.55
PAAF1-207ENST00000536003 C12orf60Q5U649 245 aa18.49■□□□□ 0.55
PAAF1-207ENST00000536003 CATSPERGQ6ZRH7 1159 aa18.49■□□□□ 0.55
PAAF1-207ENST00000536003 KBTBD3Q8NAB2 608 aa18.49■□□□□ 0.55
PAAF1-207ENST00000536003 NKX2-3Q8TAU0 364 aa18.49■□□□□ 0.55
PAAF1-207ENST00000536003 RPAP3Q9H6T3 665 aaPredicted RBP18.49■□□□□ 0.55
PAAF1-207ENST00000536003 SPDYE16A6NNV3 312 aaPredicted RBP18.49■□□□□ 0.55
PAAF1-207ENST00000536003 USP17L15C9J2P7 530 aa18.49■□□□□ 0.55
PAAF1-207ENST00000536003 USP17L13C9JLJ4 530 aa18.49■□□□□ 0.55
PAAF1-207ENST00000536003 USP17L11C9JVI0 530 aa18.49■□□□□ 0.55
PAAF1-207ENST00000536003 USP17L18D6R9N7 530 aa18.49■□□□□ 0.55
PAAF1-207ENST00000536003 USP17L22D6RA61 530 aa18.49■□□□□ 0.55
PAAF1-207ENST00000536003 USP17L17D6RBQ6 530 aa18.49■□□□□ 0.55
PAAF1-207ENST00000536003 USP17L19D6RCP7 530 aa18.49■□□□□ 0.55
PAAF1-207ENST00000536003 USP17L20D6RJB6 530 aa18.49■□□□□ 0.55
PAAF1-207ENST00000536003 HMGCRP04035 888 aa18.49■□□□□ 0.55
PAAF1-207ENST00000536003 USP17L24Q0WX57 530 aa18.49■□□□□ 0.55
PAAF1-207ENST00000536003 DEFB118Q96PH6 123 aa18.49■□□□□ 0.55
PAAF1-207ENST00000536003 SWAP70Q9UH65 585 aa18.49■□□□□ 0.55
PAAF1-207ENST00000536003 LAMA3Q16787 3333 aa18.48■□□□□ 0.55
PAAF1-207ENST00000536003 SGPL1O95470 568 aa18.48■□□□□ 0.55
PAAF1-207ENST00000536003 CYP2B6P20813 491 aa18.48■□□□□ 0.55
PAAF1-207ENST00000536003 ZSCAN25Q6NSZ9 544 aa18.48■□□□□ 0.55
PAAF1-207ENST00000536003 CTR9Q6PD62 1173 aa18.48■□□□□ 0.55
PAAF1-207ENST00000536003 TMEM179Q6ZVK1 233 aa18.48■□□□□ 0.55
PAAF1-207ENST00000536003 GPR142Q7Z601 462 aa18.48■□□□□ 0.55
PAAF1-207ENST00000536003 SIAH1Q8IUQ4 282 aa18.48■□□□□ 0.55
PAAF1-207ENST00000536003 OSBP2Q969R2 916 aa18.48■□□□□ 0.55
PAAF1-207ENST00000536003 CRBNQ96SW2 442 aa18.48■□□□□ 0.55
PAAF1-207ENST00000536003 BTBD7Q9P203 1132 aa18.48■□□□□ 0.55
PAAF1-207ENST00000536003 CDK8P49336 464 aa18.47■□□□□ 0.55
PAAF1-207ENST00000536003 C16orf86Q6ZW13 317 aa18.47■□□□□ 0.55
PAAF1-207ENST00000536003 PI4K2BQ8TCG2 481 aa18.47■□□□□ 0.55
PAAF1-207ENST00000536003 GTF3C2Q8WUA4 911 aaPredicted RBP18.47■□□□□ 0.55
PAAF1-207ENST00000536003 GPATCH3Q96I76 525 aa18.47■□□□□ 0.55
PAAF1-207ENST00000536003 STRBPQ96SI9 672 aaKnown RBP18.47■□□□□ 0.55
PAAF1-207ENST00000536003 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.47■□□□□ 0.55
PAAF1-207ENST00000536003 FARP2O94887 1054 aaPredicted RBP18.46■□□□□ 0.55
PAAF1-207ENST00000536003 MAPK4P31152 587 aa18.46■□□□□ 0.55
PAAF1-207ENST00000536003 USP6NLQ92738 828 aa18.46■□□□□ 0.55
PAAF1-207ENST00000536003 RABGAP1Q9Y3P9 1069 aa18.46■□□□□ 0.55
PAAF1-207ENST00000536003 ZNF236Q9UL36 1845 aa18.46■□□□□ 0.55
PAAF1-207ENST00000536003 TRIOBPQ9H2D6 2365 aa18.46■□□□□ 0.55
PAAF1-207ENST00000536003 M0R2C6 588 aa18.45■□□□□ 0.54
PAAF1-207ENST00000536003 ICA1Q05084 483 aa18.45■□□□□ 0.54
PAAF1-207ENST00000536003 CCL14Q16627 93 aa18.45■□□□□ 0.54
PAAF1-207ENST00000536003 MORN1Q5T089 497 aa18.45■□□□□ 0.54
PAAF1-207ENST00000536003 LBX2Q6XYB7 198 aa18.45■□□□□ 0.54
PAAF1-207ENST00000536003 SPICE1Q8N0Z3 855 aa18.45■□□□□ 0.54
PAAF1-207ENST00000536003 SOCS4Q8WXH5 440 aa18.45■□□□□ 0.54
PAAF1-207ENST00000536003 NUDT12Q9BQG2 462 aa18.45■□□□□ 0.54
PAAF1-207ENST00000536003 EPB41L4AQ9HCS5 686 aaPredicted RBP18.45■□□□□ 0.54
PAAF1-207ENST00000536003 MYH4Q9Y623 1939 aa18.45■□□□□ 0.54
PAAF1-207ENST00000536003 GSG1L2A8MUP6 293 aa18.45■□□□□ 0.54
PAAF1-207ENST00000536003 DIS3LQ8TF46 1054 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms