RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 USP17L24Q0WX57 530 aa22.74■■□□□ 1.23
NDUFS3-213ENST00000534716 POTEEQ6S8J3 1075 aa22.74■■□□□ 1.23
NDUFS3-213ENST00000534716 ARMT1Q9H993 441 aa22.74■■□□□ 1.23
NDUFS3-213ENST00000534716 SWAP70Q9UH65 585 aa22.74■■□□□ 1.23
NDUFS3-213ENST00000534716 MAPK4P31152 587 aa22.73■■□□□ 1.23
NDUFS3-213ENST00000534716 ERVK-9P63128 1117 aa22.73■■□□□ 1.23
NDUFS3-213ENST00000534716 ERVK-24P63145 666 aa22.73■■□□□ 1.23
NDUFS3-213ENST00000534716 ZSCAN25Q6NSZ9 544 aa22.73■■□□□ 1.23
NDUFS3-213ENST00000534716 ACER1Q8TDN7 264 aa22.73■■□□□ 1.23
NDUFS3-213ENST00000534716 FEZ1Q99689 392 aa22.73■■□□□ 1.23
NDUFS3-213ENST00000534716 BCL11AQ9H165 835 aa22.73■■□□□ 1.23
NDUFS3-213ENST00000534716 SMARCA5O60264 1052 aaPredicted RBP22.72■■□□□ 1.23
NDUFS3-213ENST00000534716 MBD4O95243 580 aa22.72■■□□□ 1.23
NDUFS3-213ENST00000534716 HMGCRP04035 888 aa22.72■■□□□ 1.23
NDUFS3-213ENST00000534716 VCAM1P19320 739 aa22.72■■□□□ 1.23
NDUFS3-213ENST00000534716 LBX2Q6XYB7 198 aa22.72■■□□□ 1.23
NDUFS3-213ENST00000534716 CATSPERGQ6ZRH7 1159 aa22.72■■□□□ 1.23
NDUFS3-213ENST00000534716 CRISPLD2Q9H0B8 497 aa22.72■■□□□ 1.23
NDUFS3-213ENST00000534716 ECHDC1Q9NTX5 307 aa22.72■■□□□ 1.23
NDUFS3-213ENST00000534716 RABGAP1Q9Y3P9 1069 aa22.72■■□□□ 1.23
NDUFS3-213ENST00000534716 NAV1Q8NEY1 1877 aa22.72■■□□□ 1.23
NDUFS3-213ENST00000534716 XRCC5P13010 732 aaKnown RBP22.71■■□□□ 1.23
NDUFS3-213ENST00000534716 EVX2Q03828 476 aa22.71■■□□□ 1.23
NDUFS3-213ENST00000534716 SEPT2Q15019 361 aa22.71■■□□□ 1.23
NDUFS3-213ENST00000534716 Q3C1V9 767 aa22.71■■□□□ 1.23
NDUFS3-213ENST00000534716 SLFNL1Q499Z3 407 aa22.71■■□□□ 1.23
NDUFS3-213ENST00000534716 SOCS4Q8WXH5 440 aa22.71■■□□□ 1.23
NDUFS3-213ENST00000534716 PRKAB2O43741 272 aa22.7■■□□□ 1.22
NDUFS3-213ENST00000534716 PEX10O60683 326 aa22.7■■□□□ 1.22
NDUFS3-213ENST00000534716 CYP2D6P10635 497 aa22.7■■□□□ 1.22
NDUFS3-213ENST00000534716 ZYXQ15942 572 aaKnown RBP22.7■■□□□ 1.22
NDUFS3-213ENST00000534716 USP6NLQ92738 828 aa22.7■■□□□ 1.22
NDUFS3-213ENST00000534716 CNMDO75829 334 aa22.69■■□□□ 1.22
NDUFS3-213ENST00000534716 CHGBP05060 677 aa22.69■■□□□ 1.22
NDUFS3-213ENST00000534716 HABP4Q5JVS0 413 aaKnown RBP22.69■■□□□ 1.22
NDUFS3-213ENST00000534716 C12orf60Q5U649 245 aa22.69■■□□□ 1.22
NDUFS3-213ENST00000534716 TMEM179Q6ZVK1 233 aa22.69■■□□□ 1.22
NDUFS3-213ENST00000534716 TRMT44Q8IYL2 757 aaKnown RBP22.69■■□□□ 1.22
NDUFS3-213ENST00000534716 DEFB118Q96PH6 123 aa22.69■■□□□ 1.22
NDUFS3-213ENST00000534716 NUDT12Q9BQG2 462 aa22.69■■□□□ 1.22
NDUFS3-213ENST00000534716 MORN1Q5T089 497 aa22.68■■□□□ 1.22
NDUFS3-213ENST00000534716 SLC44A5Q8NCS7 719 aa22.68■■□□□ 1.22
NDUFS3-213ENST00000534716 HTATIP2Q9BUP3 242 aa22.68■■□□□ 1.22
NDUFS3-213ENST00000534716 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.68■■□□□ 1.22
NDUFS3-213ENST00000534716 PORCNQ9H237 461 aa22.68■■□□□ 1.22
NDUFS3-213ENST00000534716 PLXNB2O15031 1838 aa22.68■■□□□ 1.22
NDUFS3-213ENST00000534716 RPTORQ8N122 1335 aa22.67■■□□□ 1.22
NDUFS3-213ENST00000534716 A0A1W2PRG0 241 aa22.67■■□□□ 1.22
NDUFS3-213ENST00000534716 MPHOSPH10O00566 681 aaKnown RBP22.67■■□□□ 1.22
NDUFS3-213ENST00000534716 FARP2O94887 1054 aaPredicted RBP22.67■■□□□ 1.22
NDUFS3-213ENST00000534716 TFRCP02786 760 aaKnown RBP22.67■■□□□ 1.22
NDUFS3-213ENST00000534716 MAP3K21Q5TCX8 1036 aa22.67■■□□□ 1.22
NDUFS3-213ENST00000534716 GPR142Q7Z601 462 aa22.67■■□□□ 1.22
NDUFS3-213ENST00000534716 PLEKHH3Q7Z736 793 aa22.67■■□□□ 1.22
NDUFS3-213ENST00000534716 KBTBD3Q8NAB2 608 aa22.67■■□□□ 1.22
NDUFS3-213ENST00000534716 TRIB2Q92519 343 aa22.67■■□□□ 1.22
NDUFS3-213ENST00000534716 GPATCH3Q96I76 525 aa22.67■■□□□ 1.22
NDUFS3-213ENST00000534716 CCDC17Q96LX7 622 aa22.67■■□□□ 1.22
NDUFS3-213ENST00000534716 PAGR1Q9BTK6 254 aa22.67■■□□□ 1.22
NDUFS3-213ENST00000534716 PUS7LQ9H0K6 701 aaKnown RBP22.67■■□□□ 1.22
NDUFS3-213ENST00000534716 RPAP3Q9H6T3 665 aaPredicted RBP22.67■■□□□ 1.22
NDUFS3-213ENST00000534716 DOCK3Q8IZD9 2030 aa22.67■■□□□ 1.22
NDUFS3-213ENST00000534716 USP17L12C9JPN9 530 aa22.66■■□□□ 1.22
NDUFS3-213ENST00000534716 USP17L21D6R901 530 aa22.66■■□□□ 1.22
NDUFS3-213ENST00000534716 CCNA1P78396 465 aa22.66■■□□□ 1.22
NDUFS3-213ENST00000534716 C16orf86Q6ZW13 317 aa22.66■■□□□ 1.22
NDUFS3-213ENST00000534716 AMOTL1Q8IY63 956 aa22.66■■□□□ 1.22
NDUFS3-213ENST00000534716 DYNLL2Q96FJ2 89 aa22.66■■□□□ 1.22
NDUFS3-213ENST00000534716 DDRGK1Q96HY6 314 aa22.66■■□□□ 1.22
NDUFS3-213ENST00000534716 HMX1Q9NP08 348 aaPredicted RBP22.66■■□□□ 1.22
NDUFS3-213ENST00000534716 SLC4A4Q9Y6R1 1079 aa22.66■■□□□ 1.22
NDUFS3-213ENST00000534716 SPDYE16A6NNV3 312 aaPredicted RBP22.65■■□□□ 1.22
NDUFS3-213ENST00000534716 H0YGN5 161 aa22.65■■□□□ 1.22
NDUFS3-213ENST00000534716 CYP2B6P20813 491 aa22.65■■□□□ 1.22
NDUFS3-213ENST00000534716 RGS2P41220 211 aa22.65■■□□□ 1.22
NDUFS3-213ENST00000534716 CDK8P49336 464 aa22.65■■□□□ 1.22
NDUFS3-213ENST00000534716 TRIM32Q13049 653 aa22.65■■□□□ 1.22
NDUFS3-213ENST00000534716 SIAH1Q8IUQ4 282 aa22.65■■□□□ 1.22
NDUFS3-213ENST00000534716 CCAR1Q8IX12 1150 aaKnown RBP22.65■■□□□ 1.22
NDUFS3-213ENST00000534716 ANKLE1Q8NAG6 615 aa22.65■■□□□ 1.22
NDUFS3-213ENST00000534716 GIMAP6Q6P9H5 292 aa22.64■■□□□ 1.21
NDUFS3-213ENST00000534716 CTR9Q6PD62 1173 aa22.64■■□□□ 1.21
NDUFS3-213ENST00000534716 LPAR1Q92633 364 aa22.64■■□□□ 1.21
NDUFS3-213ENST00000534716 DPF3Q92784 378 aa22.64■■□□□ 1.21
NDUFS3-213ENST00000534716 STRBPQ96SI9 672 aaKnown RBP22.64■■□□□ 1.21
NDUFS3-213ENST00000534716 HOXC10Q9NYD6 342 aa22.64■■□□□ 1.21
NDUFS3-213ENST00000534716 BTBD7Q9P203 1132 aa22.64■■□□□ 1.21
NDUFS3-213ENST00000534716 TMX2Q9Y320 296 aa22.64■■□□□ 1.21
NDUFS3-213ENST00000534716 PCDHB15Q9Y5E8 787 aa22.64■■□□□ 1.21
NDUFS3-213ENST00000534716 GLRX3O76003 335 aaKnown RBP22.63■■□□□ 1.21
NDUFS3-213ENST00000534716 AKR1B1P15121 316 aa22.63■■□□□ 1.21
NDUFS3-213ENST00000534716 COG2Q14746 738 aa22.63■■□□□ 1.21
NDUFS3-213ENST00000534716 APBA2Q99767 749 aa22.63■■□□□ 1.21
NDUFS3-213ENST00000534716 ARHGEF10LQ9HCE6 1279 aa22.63■■□□□ 1.21
NDUFS3-213ENST00000534716 ARPP21Q9UBL0 812 aaPredicted RBP22.63■■□□□ 1.21
NDUFS3-213ENST00000534716 TTC41PQ6P2S7 1318 aa22.62■■□□□ 1.21
NDUFS3-213ENST00000534716 CYP2D7A0A087X1C5 515 aa22.62■■□□□ 1.21
NDUFS3-213ENST00000534716 SMIM22K7EJ46 135 aa22.62■■□□□ 1.21
NDUFS3-213ENST00000534716 ZFYP08048 801 aaPredicted RBP22.62■■□□□ 1.21
NDUFS3-213ENST00000534716 SBK1Q52WX2 424 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms