RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 ARHGEF10LQ9HCE6 1279 aa23.51■■□□□ 1.35
CHEK1-215ENST00000533778 U3KPZ7 1027 aaPredicted RBP23.51■■□□□ 1.35
CHEK1-215ENST00000533778 FOXN1O15353 648 aa23.5■■□□□ 1.35
CHEK1-215ENST00000533778 ORC4O43929 436 aa23.5■■□□□ 1.35
CHEK1-215ENST00000533778 FGRP09769 529 aa23.5■■□□□ 1.35
CHEK1-215ENST00000533778 TSPY3P0CV98 308 aa23.5■■□□□ 1.35
CHEK1-215ENST00000533778 TSPY8P0CW00 308 aa23.5■■□□□ 1.35
CHEK1-215ENST00000533778 HAND2P61296 217 aa23.5■■□□□ 1.35
CHEK1-215ENST00000533778 ICA1Q05084 483 aa23.5■■□□□ 1.35
CHEK1-215ENST00000533778 MOGSQ13724 837 aa23.5■■□□□ 1.35
CHEK1-215ENST00000533778 USP17L2Q6R6M4 530 aa23.5■■□□□ 1.35
CHEK1-215ENST00000533778 MFSD6Q6ZSS7 791 aa23.5■■□□□ 1.35
CHEK1-215ENST00000533778 FAM43AQ8N2R8 423 aa23.5■■□□□ 1.35
CHEK1-215ENST00000533778 KIAA1683Q9H0B3 1180 aa23.5■■□□□ 1.35
CHEK1-215ENST00000533778 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.5■■□□□ 1.35
CHEK1-215ENST00000533778 SLC45A1Q9Y2W3 748 aa23.5■■□□□ 1.35
CHEK1-215ENST00000533778 HMGCS2P54868 508 aa23.49■■□□□ 1.35
CHEK1-215ENST00000533778 PABPC4Q13310 644 aaKnown RBP eCLIP23.49■■□□□ 1.35
CHEK1-215ENST00000533778 PPP4R3BQ5MIZ7 849 aa23.49■■□□□ 1.35
CHEK1-215ENST00000533778 AKNAD1Q5T1N1 836 aa23.49■■□□□ 1.35
CHEK1-215ENST00000533778 STAG1Q8WVM7 1258 aa23.49■■□□□ 1.35
CHEK1-215ENST00000533778 TOMM22Q9NS69 142 aa23.49■■□□□ 1.35
CHEK1-215ENST00000533778 AGTPBP1Q9UPW5 1226 aa23.49■■□□□ 1.35
CHEK1-215ENST00000533778 TSPY2A6NKD2 308 aa23.48■■□□□ 1.35
CHEK1-215ENST00000533778 PDHXO00330 501 aa23.48■■□□□ 1.35
CHEK1-215ENST00000533778 TFAP4Q01664 338 aa23.48■■□□□ 1.35
CHEK1-215ENST00000533778 PTH1RQ03431 593 aa23.48■■□□□ 1.35
CHEK1-215ENST00000533778 NEDD1Q8NHV4 660 aa23.48■■□□□ 1.35
CHEK1-215ENST00000533778 MAP4K1Q92918 833 aa23.48■■□□□ 1.35
CHEK1-215ENST00000533778 ZFYVE28Q9HCC9 887 aa23.48■■□□□ 1.35
CHEK1-215ENST00000533778 RANBP6O60518 1105 aaKnown RBP23.47■■□□□ 1.35
CHEK1-215ENST00000533778 TAF1CQ15572 869 aaPredicted RBP23.47■■□□□ 1.35
CHEK1-215ENST00000533778 GPAT2Q6NUI2 795 aa23.47■■□□□ 1.35
CHEK1-215ENST00000533778 ACER1Q8TDN7 264 aa23.47■■□□□ 1.35
CHEK1-215ENST00000533778 ANO2Q9NQ90 1003 aa23.47■■□□□ 1.35
CHEK1-215ENST00000533778 TBC1D8O95759 1140 aa23.46■■□□□ 1.35
CHEK1-215ENST00000533778 HSPA8P11142 646 aaKnown RBP23.46■■□□□ 1.35
CHEK1-215ENST00000533778 C12orf42Q96LP6 360 aa23.46■■□□□ 1.35
CHEK1-215ENST00000533778 PARK7Q99497 189 aaKnown RBP23.46■■□□□ 1.35
CHEK1-215ENST00000533778 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.46■■□□□ 1.35
CHEK1-215ENST00000533778 PNMA3Q9UL41 463 aa23.46■■□□□ 1.35
CHEK1-215ENST00000533778 EEF2P13639 858 aaKnown RBP23.45■■□□□ 1.34
CHEK1-215ENST00000533778 ATP2B2Q01814 1243 aa23.45■■□□□ 1.34
CHEK1-215ENST00000533778 NOM1Q5C9Z4 860 aaKnown RBP23.45■■□□□ 1.34
CHEK1-215ENST00000533778 FAM47AQ5JRC9 791 aa23.45■■□□□ 1.34
CHEK1-215ENST00000533778 RRP12Q5JTH9 1297 aaKnown RBP23.45■■□□□ 1.34
CHEK1-215ENST00000533778 TBC1D10CQ8IV04 446 aa23.45■■□□□ 1.34
CHEK1-215ENST00000533778 ESR2Q92731 530 aa23.45■■□□□ 1.34
CHEK1-215ENST00000533778 CNNM2Q9H8M5 875 aa23.45■■□□□ 1.34
CHEK1-215ENST00000533778 INCENPQ9NQS7 918 aa23.45■■□□□ 1.34
CHEK1-215ENST00000533778 EMILIN3Q9NT22 766 aa23.45■■□□□ 1.34
CHEK1-215ENST00000533778 NYAP2Q9P242 653 aa23.45■■□□□ 1.34
CHEK1-215ENST00000533778 TMX2Q9Y320 296 aa23.45■■□□□ 1.34
CHEK1-215ENST00000533778 PLIN4Q96Q06 1357 aa23.44■■□□□ 1.34
CHEK1-215ENST00000533778 IGKV6D-41A0A0C4DH26 115 aa23.44■■□□□ 1.34
CHEK1-215ENST00000533778 OSBPP22059 807 aa23.44■■□□□ 1.34
CHEK1-215ENST00000533778 CRHR2Q13324 411 aa23.44■■□□□ 1.34
CHEK1-215ENST00000533778 ZYXQ15942 572 aaKnown RBP23.44■■□□□ 1.34
CHEK1-215ENST00000533778 SIAH1Q8IUQ4 282 aa23.44■■□□□ 1.34
CHEK1-215ENST00000533778 LSG1Q9H089 658 aaKnown RBP23.44■■□□□ 1.34
CHEK1-215ENST00000533778 NBPF3Q9H094 633 aa23.44■■□□□ 1.34
CHEK1-215ENST00000533778 MTMR4Q9NYA4 1195 aa23.44■■□□□ 1.34
CHEK1-215ENST00000533778 TSKSQ9UJT2 592 aa23.44■■□□□ 1.34
CHEK1-215ENST00000533778 SYNPO2Q9UMS6 1093 aa23.44■■□□□ 1.34
CHEK1-215ENST00000533778 LAMB1P07942 1786 aa23.44■■□□□ 1.34
CHEK1-215ENST00000533778 A0A1W2PRG0 241 aa23.43■■□□□ 1.34
CHEK1-215ENST00000533778 TTLL1O95922 423 aa23.43■■□□□ 1.34
CHEK1-215ENST00000533778 LBX1P52954 281 aa23.43■■□□□ 1.34
CHEK1-215ENST00000533778 TREML2Q5T2D2 321 aa23.43■■□□□ 1.34
CHEK1-215ENST00000533778 LPAR1Q92633 364 aa23.43■■□□□ 1.34
CHEK1-215ENST00000533778 KRT23Q9C075 422 aa23.43■■□□□ 1.34
CHEK1-215ENST00000533778 RBM8AQ9Y5S9 174 aaKnown RBP23.43■■□□□ 1.34
CHEK1-215ENST00000533778 HOXA7P31268 230 aaPredicted RBP23.42■■□□□ 1.34
CHEK1-215ENST00000533778 TRDNQ13061 729 aa23.42■■□□□ 1.34
CHEK1-215ENST00000533778 CLEC10AQ8IUN9 316 aa23.42■■□□□ 1.34
CHEK1-215ENST00000533778 CEP95Q96GE4 821 aa23.42■■□□□ 1.34
CHEK1-215ENST00000533778 GOPCQ9HD26 462 aa23.42■■□□□ 1.34
CHEK1-215ENST00000533778 PRDM10Q9NQV6 1147 aa23.42■■□□□ 1.34
CHEK1-215ENST00000533778 CLIP2Q9UDT6 1046 aa23.42■■□□□ 1.34
CHEK1-215ENST00000533778 TACC3Q9Y6A5 838 aa23.42■■□□□ 1.34
CHEK1-215ENST00000533778 ATAD5Q96QE3 1844 aa23.42■■□□□ 1.34
CHEK1-215ENST00000533778 GPR25O00155 361 aa23.41■■□□□ 1.34
CHEK1-215ENST00000533778 TLR2O60603 784 aa23.41■■□□□ 1.34
CHEK1-215ENST00000533778 CYP21A2P08686 494 aa23.41■■□□□ 1.34
CHEK1-215ENST00000533778 MKL1Q969V6 931 aa23.41■■□□□ 1.34
CHEK1-215ENST00000533778 VCPKMTQ9H867 229 aa23.41■■□□□ 1.34
CHEK1-215ENST00000533778 TCP11L1Q9NUJ3 509 aa23.41■■□□□ 1.34
CHEK1-215ENST00000533778 USP17L15C9J2P7 530 aa23.4■■□□□ 1.34
CHEK1-215ENST00000533778 USP17L13C9JLJ4 530 aa23.4■■□□□ 1.34
CHEK1-215ENST00000533778 USP17L11C9JVI0 530 aa23.4■■□□□ 1.34
CHEK1-215ENST00000533778 USP17L18D6R9N7 530 aa23.4■■□□□ 1.34
CHEK1-215ENST00000533778 USP17L22D6RA61 530 aa23.4■■□□□ 1.34
CHEK1-215ENST00000533778 USP17L17D6RBQ6 530 aa23.4■■□□□ 1.34
CHEK1-215ENST00000533778 USP17L19D6RCP7 530 aa23.4■■□□□ 1.34
CHEK1-215ENST00000533778 USP17L20D6RJB6 530 aa23.4■■□□□ 1.34
CHEK1-215ENST00000533778 REC8O95072 547 aa23.4■■□□□ 1.34
CHEK1-215ENST00000533778 IRX3P78415 501 aaPredicted RBP23.4■■□□□ 1.34
CHEK1-215ENST00000533778 USP17L24Q0WX57 530 aa23.4■■□□□ 1.34
CHEK1-215ENST00000533778 DGKZQ13574 1117 aa23.4■■□□□ 1.34
CHEK1-215ENST00000533778 CCDC178Q5BJE1 867 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms