RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 CCDC94Q9BW85 323 aaPredicted RBP12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 CLRN2A0PK11 232 aa12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 ALAS1P13196 640 aa12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 PRPHP41219 470 aa12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 SLC8A3P57103 927 aa12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 IWS1Q96ST2 819 aa12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 SYNE4Q8N205 404 aa12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 PNMA1Q8ND90 353 aa12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 NBPF3Q9H094 633 aa12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 MLXIPQ9HAP2 919 aa12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.65□□□□□ -0.387e-8■□□□□ 8.2
AMBRA1-211ENST00000533727 ZKSCAN5Q9Y2L8 839 aa12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 E7EWF7 191 aa12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 ECM2O94769 699 aaPredicted RBP12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 PDE4DQ08499 809 aa12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 RNF187Q5TA31 235 aaPredicted RBP12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 FAM160B2Q86V87 743 aa12.65□□□□□ -0.38
AMBRA1-211ENST00000533727 MED23Q9ULK4 1368 aa12.65□□□□□ -0.39
AMBRA1-211ENST00000533727 PPFIA3O75145 1194 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 RXRAP19793 462 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 SNX16P57768 344 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 NOLC1Q14978 699 aaKnown RBP eCLIP12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 USH1GQ495M9 461 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 DPP9Q86TI2 863 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 NCAPG2Q86XI2 1143 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 EHBP1Q8NDI1 1231 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 TRIM6Q9C030 488 aaPredicted RBP12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 NT5C3AQ9H0P0 336 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 HOMER2Q9NSB8 354 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 FRMD4BQ9Y2L6 1034 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 SUGT1Q9Y2Z0 365 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 TTC38Q5R3I4 469 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 CNTNAP4Q9C0A0 1308 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 TTLL1O95922 423 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 ZNF165P49910 485 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 DIS3L2Q8IYB7 885 aaKnown RBP12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 FNBP1Q96RU3 617 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 PUS3Q9BZE2 481 aaKnown RBP12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 STAP2Q9UGK3 403 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 SNX14Q9Y5W7 946 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 KDM3AQ9Y4C1 1321 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 BIN1O00499 593 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 CCNT1O60563 726 aaKnown RBP12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 MARCKSP29966 332 aaPredicted RBP12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 GBP2P32456 591 aaPredicted RBP12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 PAFAH1B1P43034 410 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 SMAP1Q8IYB5 467 aaPredicted RBP12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 ZNF274Q96GC6 653 aaPredicted RBP12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 DNM3Q9UQ16 869 aa12.64□□□□□ -0.39
AMBRA1-211ENST00000533727 EZRP15311 586 aaKnown RBP12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 FAM47AQ5JRC9 791 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 PIK3AP1Q6ZUJ8 805 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 JPH2Q9BR39 696 aaPredicted RBP12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 AMNQ9BXJ7 453 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 PKD2L1Q9P0L9 805 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 KDM4FA0A1W2PPD8 638 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 ASNSP08243 561 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 ACTN2P35609 894 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 CEP135Q66GS9 1140 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 TBC1D9BQ66K14 1250 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 CNNM4Q6P4Q7 775 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 LRSAM1Q6UWE0 723 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 GLG1Q92896 1179 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 CDHR1Q96JP9 859 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 ZNF341Q9BYN7 854 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 LRWD1Q9UFC0 647 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 AP5M1Q9H0R1 490 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 CCPG1Q9ULG6 757 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 ELP1O95163 1332 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 IVLP07476 585 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 SNW1Q13573 536 aaKnown RBP12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 NFIXQ14938 502 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 R3HDM1Q15032 1099 aaKnown RBP12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 HS1BP3Q53T59 392 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 FAM160B1Q5W0V3 765 aa12.63□□□□□ -0.39
AMBRA1-211ENST00000533727 CALCRLQ16602 461 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 ZSCAN23Q3MJ62 389 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 ZMYM1Q5SVZ6 1142 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 EXOC8Q8IYI6 725 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 SLFN12Q8IYM2 578 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 ISCA1Q9BUE6 129 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 CNPY2Q9Y2B0 182 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 PNPLA6Q8IY17 1366 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 PRAMEF22A3QJZ6 481 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 KCNQ2O43526 872 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 GAS7O60861 476 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 HSPA4P34932 840 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 MAP2K1Q02750 393 aaPredicted RBP12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 WDR44Q5JSH3 913 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 TRMT2AQ8IZ69 625 aaKnown RBP12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 ZNF526Q8TF50 670 aaPredicted RBP12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 PSTPIP2Q9H939 334 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 TNKSO95271 1327 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 SMCO2A6NFE2 343 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 TMEM232C9JQI7 657 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 CHMP2AO43633 222 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 ECE2O60344 883 aa12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 HSPD1P10809 573 aaKnown RBP12.62□□□□□ -0.39
AMBRA1-211ENST00000533727 EPB41P11171 864 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms