RNA–Protein interactions for RNA: ENST00000533674.1

BEST3-207, Transcript of bestrophin 3, humanhuman

TSL 3

Gene BEST3, Length 670 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-207ENST00000533674 XAGE2Q96GT9 111 aa11.13□□□□□ -0.63
BEST3-207ENST00000533674 LRCH3Q96II8 777 aa11.13□□□□□ -0.63
BEST3-207ENST00000533674 API5Q9BZZ5 524 aaKnown RBP11.13□□□□□ -0.63
BEST3-207ENST00000533674 CWC22Q9HCG8 908 aaKnown RBP11.13□□□□□ -0.63
BEST3-207ENST00000533674 RABGEF1Q9UJ41 708 aa11.13□□□□□ -0.63
BEST3-207ENST00000533674 ZMYND8Q9ULU4 1186 aaPredicted RBP11.13□□□□□ -0.63
BEST3-207ENST00000533674 ATAD5Q96QE3 1844 aa11.13□□□□□ -0.63
BEST3-207ENST00000533674 RPTORQ8N122 1335 aa11.12□□□□□ -0.63
BEST3-207ENST00000533674 GPR75-ASB3A0A0A6YYF3 556 aa11.12□□□□□ -0.63
BEST3-207ENST00000533674 USP17L5A8MUK1 530 aa11.12□□□□□ -0.63
BEST3-207ENST00000533674 SOX1O00570 391 aaPredicted RBP11.12□□□□□ -0.63
BEST3-207ENST00000533674 SRGAP3O43295 1099 aa11.12□□□□□ -0.63
BEST3-207ENST00000533674 MAP3K10Q02779 954 aa11.12□□□□□ -0.63
BEST3-207ENST00000533674 TFCP2Q12800 502 aa11.12□□□□□ -0.63
BEST3-207ENST00000533674 PDE3AQ14432 1141 aa11.12□□□□□ -0.63
BEST3-207ENST00000533674 C11orf49Q9H6J7 331 aa11.12□□□□□ -0.63
BEST3-207ENST00000533674 COPRSQ9NQ92 184 aa11.12□□□□□ -0.63
BEST3-207ENST00000533674 TMOD4Q9NZQ9 345 aa11.12□□□□□ -0.63
BEST3-207ENST00000533674 NOB1Q9ULX3 412 aaKnown RBP11.12□□□□□ -0.63
BEST3-207ENST00000533674 LOC285556D6RIA3 1793 aa11.12□□□□□ -0.63
BEST3-207ENST00000533674 SZT2Q5T011 3432 aa11.11□□□□□ -0.63
BEST3-207ENST00000533674 MAP4K4O95819 1239 aaPredicted RBP11.11□□□□□ -0.63
BEST3-207ENST00000533674 SYN1P17600 705 aa11.11□□□□□ -0.63
BEST3-207ENST00000533674 CAP2P40123 477 aa11.11□□□□□ -0.63
BEST3-207ENST00000533674 SLFN5Q08AF3 891 aa11.11□□□□□ -0.63
BEST3-207ENST00000533674 TEX11Q8IYF3 940 aa11.11□□□□□ -0.63
BEST3-207ENST00000533674 CRACR2BQ8N4Y2 399 aaPredicted RBP11.11□□□□□ -0.63
BEST3-207ENST00000533674 SPATA5Q8NB90 893 aa11.11□□□□□ -0.63
BEST3-207ENST00000533674 KCTD12Q96CX2 325 aaKnown RBP11.11□□□□□ -0.63
BEST3-207ENST00000533674 ASCC2Q9H1I8 757 aaPredicted RBP11.11□□□□□ -0.63
BEST3-207ENST00000533674 LRP2BPQ9P2M1 347 aa11.11□□□□□ -0.63
BEST3-207ENST00000533674 HCSTQ9UBK5 93 aa11.11□□□□□ -0.63
BEST3-207ENST00000533674 DDX60LQ5H9U9 1706 aaKnown RBP11.11□□□□□ -0.63
BEST3-207ENST00000533674 GNAI3P08754 354 aa11.1□□□□□ -0.63
BEST3-207ENST00000533674 CYP2B6P20813 491 aa11.1□□□□□ -0.63
BEST3-207ENST00000533674 RHBDL3P58872 404 aa11.1□□□□□ -0.63
BEST3-207ENST00000533674 MTMR2Q13614 643 aa11.1□□□□□ -0.63
BEST3-207ENST00000533674 DEFB123Q8N688 67 aa11.1□□□□□ -0.63
BEST3-207ENST00000533674 MEIS3Q99687 375 aa11.1□□□□□ -0.63
BEST3-207ENST00000533674 NUDT12Q9BQG2 462 aa11.1□□□□□ -0.63
BEST3-207ENST00000533674 HERC5Q9UII4 1024 aaKnown RBP11.1□□□□□ -0.63
BEST3-207ENST00000533674 COL2A1P02458 1487 aaPredicted RBP11.1□□□□□ -0.63
BEST3-207ENST00000533674 TRIM6-TRIM34B2RNG4 842 aa11.09□□□□□ -0.63
BEST3-207ENST00000533674 BAG3O95817 575 aa11.09□□□□□ -0.63
BEST3-207ENST00000533674 ZKSCAN1P17029 563 aaPredicted RBP11.09□□□□□ -0.63
BEST3-207ENST00000533674 BMP8BP34820 402 aa11.09□□□□□ -0.63
BEST3-207ENST00000533674 TRIM32Q13049 653 aa11.09□□□□□ -0.63
BEST3-207ENST00000533674 PI16Q6UXB8 463 aa11.09□□□□□ -0.63
BEST3-207ENST00000533674 TBC1D9Q6ZT07 1266 aa11.09□□□□□ -0.63
BEST3-207ENST00000533674 GPRC5AQ8NFJ5 357 aa11.09□□□□□ -0.63
BEST3-207ENST00000533674 SOCS4Q8WXH5 440 aa11.09□□□□□ -0.63
BEST3-207ENST00000533674 NSUN4Q96CB9 384 aaKnown RBP11.09□□□□□ -0.63
BEST3-207ENST00000533674 GDF15Q99988 308 aa11.09□□□□□ -0.63
BEST3-207ENST00000533674 UBE2OQ9C0C9 1292 aaKnown RBP11.09□□□□□ -0.63
BEST3-207ENST00000533674 DHX36Q9H2U1 1008 aaKnown RBP11.09□□□□□ -0.63
BEST3-207ENST00000533674 HMG20BQ9P0W2 317 aa11.09□□□□□ -0.63
BEST3-207ENST00000533674 ALPK3Q96L96 1907 aa11.09□□□□□ -0.63
BEST3-207ENST00000533674 ASNSP08243 561 aa11.08□□□□□ -0.64
BEST3-207ENST00000533674 CT47B1P0C2W7 299 aaPredicted RBP11.08□□□□□ -0.64
BEST3-207ENST00000533674 UQCRFS1P1P0C7P4 283 aa11.08□□□□□ -0.64
BEST3-207ENST00000533674 MAPK4P31152 587 aa11.08□□□□□ -0.64
BEST3-207ENST00000533674 MAGEA10P43363 369 aaPredicted RBP11.08□□□□□ -0.64
BEST3-207ENST00000533674 G3BP1Q13283 466 aaKnown RBP eCLIP11.08□□□□□ -0.64
BEST3-207ENST00000533674 SH3D19Q5HYK7 790 aa11.08□□□□□ -0.64
BEST3-207ENST00000533674 NAA16Q6N069 864 aaPredicted RBP11.08□□□□□ -0.64
BEST3-207ENST00000533674 TRMT44Q8IYL2 757 aaKnown RBP11.08□□□□□ -0.64
BEST3-207ENST00000533674 TDHQ8IZJ6 230 aa11.08□□□□□ -0.64
BEST3-207ENST00000533674 SH3RF3Q8TEJ3 882 aaPredicted RBP11.08□□□□□ -0.64
BEST3-207ENST00000533674 TRIB2Q92519 343 aa11.08□□□□□ -0.64
BEST3-207ENST00000533674 CDCA7LQ96GN5 454 aa11.08□□□□□ -0.64
BEST3-207ENST00000533674 PAGR1Q9BTK6 254 aa11.08□□□□□ -0.64
BEST3-207ENST00000533674 AATFQ9NY61 560 aaKnown RBP eCLIP11.08□□□□□ -0.64
BEST3-207ENST00000533674 PI4KBQ9UBF8 816 aa11.08□□□□□ -0.64
BEST3-207ENST00000533674 C19orf81C9J6K1 198 aa11.07□□□□□ -0.64
BEST3-207ENST00000533674 USP17L10C9JJH3 530 aa11.07□□□□□ -0.64
BEST3-207ENST00000533674 HLA-DOAP06340 250 aa11.07□□□□□ -0.64
BEST3-207ENST00000533674 RGS2P41220 211 aa11.07□□□□□ -0.64
BEST3-207ENST00000533674 BACE1P56817 501 aa11.07□□□□□ -0.64
BEST3-207ENST00000533674 HERVK_113P62684 666 aa11.07□□□□□ -0.64
BEST3-207ENST00000533674 OS9Q13438 667 aaPredicted RBP11.07□□□□□ -0.64
BEST3-207ENST00000533674 TTC39AQ5SRH9 613 aa11.07□□□□□ -0.64
BEST3-207ENST00000533674 WDR78Q5VTH9 848 aa11.07□□□□□ -0.64
BEST3-207ENST00000533674 ATF7IPQ6VMQ6 1270 aa11.07□□□□□ -0.64
BEST3-207ENST00000533674 MAPKAPK5Q8IW41 473 aa11.07□□□□□ -0.64
BEST3-207ENST00000533674 KIAA1468Q9P260 1216 aa11.07□□□□□ -0.64
BEST3-207ENST00000533674 MORF4L1Q9UBU8 362 aa11.07□□□□□ -0.64
BEST3-207ENST00000533674 GJD2Q9UKL4 321 aa11.07□□□□□ -0.64
BEST3-207ENST00000533674 OGDHLQ9ULD0 1010 aa11.07□□□□□ -0.64
BEST3-207ENST00000533674 MAST2Q6P0Q8 1798 aa11.07□□□□□ -0.64
BEST3-207ENST00000533674 GOLGA8CPA6NN73 597 aa11.06□□□□□ -0.64
BEST3-207ENST00000533674 GDF11O95390 407 aa11.06□□□□□ -0.64
BEST3-207ENST00000533674 ARID4AP29374 1257 aaPredicted RBP11.06□□□□□ -0.64
BEST3-207ENST00000533674 CCDC158Q5M9N0 1113 aa11.06□□□□□ -0.64
BEST3-207ENST00000533674 Q7L0L9 218 aa11.06□□□□□ -0.64
BEST3-207ENST00000533674 ZNF384Q8TF68 577 aa11.06□□□□□ -0.64
BEST3-207ENST00000533674 GTF3C2Q8WUA4 911 aaPredicted RBP11.06□□□□□ -0.64
BEST3-207ENST00000533674 TGFBRAP1Q8WUH2 860 aa11.06□□□□□ -0.64
BEST3-207ENST00000533674 P2RX7Q99572 595 aaKnown RBP11.06□□□□□ -0.64
BEST3-207ENST00000533674 FEZ1Q99689 392 aa11.06□□□□□ -0.64
BEST3-207ENST00000533674 WDR18Q9BV38 432 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms