RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 IFNL1Q8IU54 200 aa17.27■□□□□ 0.36
SF3B2-214ENST00000533595 BEGAINQ9BUH8 593 aa17.27■□□□□ 0.36
SF3B2-214ENST00000533595 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.27■□□□□ 0.36
SF3B2-214ENST00000533595 KANSL2Q9H9L4 492 aa17.27■□□□□ 0.36
SF3B2-214ENST00000533595 WBP1LQ9NX94 342 aa17.27■□□□□ 0.36
SF3B2-214ENST00000533595 BACE1P56817 501 aa17.26■□□□□ 0.35
SF3B2-214ENST00000533595 ICA1Q05084 483 aa17.26■□□□□ 0.35
SF3B2-214ENST00000533595 MTMR2Q13614 643 aa17.26■□□□□ 0.35
SF3B2-214ENST00000533595 RRP12Q5JTH9 1297 aaKnown RBP17.26■□□□□ 0.35
SF3B2-214ENST00000533595 OTUD7BQ6GQQ9 843 aa17.26■□□□□ 0.35
SF3B2-214ENST00000533595 FASTKD5Q7L8L6 764 aaKnown RBP17.26■□□□□ 0.35
SF3B2-214ENST00000533595 NEDD1Q8NHV4 660 aa17.26■□□□□ 0.35
SF3B2-214ENST00000533595 FEZ1Q99689 392 aa17.26■□□□□ 0.35
SF3B2-214ENST00000533595 PTPN18Q99952 460 aa17.26■□□□□ 0.35
SF3B2-214ENST00000533595 PTPRFP10586 1907 aa17.25■□□□□ 0.35
SF3B2-214ENST00000533595 TSPY2A6NKD2 308 aa17.25■□□□□ 0.35
SF3B2-214ENST00000533595 C19orf81C9J6K1 198 aa17.25■□□□□ 0.35
SF3B2-214ENST00000533595 IGF2BP3O00425 579 aaKnown RBP eCLIP17.25■□□□□ 0.35
SF3B2-214ENST00000533595 CYP21A2P08686 494 aa17.25■□□□□ 0.35
SF3B2-214ENST00000533595 HMGCS2P54868 508 aa17.25■□□□□ 0.35
SF3B2-214ENST00000533595 MOGSQ13724 837 aa17.25■□□□□ 0.35
SF3B2-214ENST00000533595 SH3D19Q5HYK7 790 aa17.25■□□□□ 0.35
SF3B2-214ENST00000533595 GADL1Q6ZQY3 521 aa17.25■□□□□ 0.35
SF3B2-214ENST00000533595 CLEC10AQ8IUN9 316 aa17.25■□□□□ 0.35
SF3B2-214ENST00000533595 ACER1Q8TDN7 264 aa17.25■□□□□ 0.35
SF3B2-214ENST00000533595 ARHGEF10LQ9HCE6 1279 aa17.25■□□□□ 0.35
SF3B2-214ENST00000533595 PLIN4Q96Q06 1357 aa17.25■□□□□ 0.35
SF3B2-214ENST00000533595 GREB1LQ9C091 1923 aaPredicted RBP17.25■□□□□ 0.35
SF3B2-214ENST00000533595 NEDD4P46934 1319 aa17.24■□□□□ 0.35
SF3B2-214ENST00000533595 BTBD19C9JJ37 291 aa17.24■□□□□ 0.35
SF3B2-214ENST00000533595 REC8O95072 547 aa17.24■□□□□ 0.35
SF3B2-214ENST00000533595 ALDH1A1P00352 501 aa17.24■□□□□ 0.35
SF3B2-214ENST00000533595 NT5C2P49902 561 aa17.24■□□□□ 0.35
SF3B2-214ENST00000533595 USP14P54578 494 aa17.24■□□□□ 0.35
SF3B2-214ENST00000533595 ATP2B2Q01814 1243 aa17.24■□□□□ 0.35
SF3B2-214ENST00000533595 USP17L2Q6R6M4 530 aa17.24■□□□□ 0.35
SF3B2-214ENST00000533595 SIAH1Q8IUQ4 282 aa17.24■□□□□ 0.35
SF3B2-214ENST00000533595 PROCA1Q8NCQ7 364 aaPredicted RBP17.24■□□□□ 0.35
SF3B2-214ENST00000533595 ESR2Q92731 530 aa17.24■□□□□ 0.35
SF3B2-214ENST00000533595 KIAA1683Q9H0B3 1180 aa17.24■□□□□ 0.35
SF3B2-214ENST00000533595 SH2D4AQ9H788 454 aa17.24■□□□□ 0.35
SF3B2-214ENST00000533595 CNNM2Q9H8M5 875 aa17.24■□□□□ 0.35
SF3B2-214ENST00000533595 RNF186Q9NXI6 227 aa17.24■□□□□ 0.35
SF3B2-214ENST00000533595 TMOD4Q9NZQ9 345 aa17.24■□□□□ 0.35
SF3B2-214ENST00000533595 IGKV6D-41A0A0C4DH26 115 aa17.23■□□□□ 0.35
SF3B2-214ENST00000533595 A0A1W2PRG0 241 aa17.23■□□□□ 0.35
SF3B2-214ENST00000533595 CA12O43570 354 aa17.23■□□□□ 0.35
SF3B2-214ENST00000533595 TRPA1O75762 1119 aa17.23■□□□□ 0.35
SF3B2-214ENST00000533595 EEF2P13639 858 aaKnown RBP17.23■□□□□ 0.35
SF3B2-214ENST00000533595 NECTIN1Q15223 517 aa17.23■□□□□ 0.35
SF3B2-214ENST00000533595 ZYXQ15942 572 aaKnown RBP17.23■□□□□ 0.35
SF3B2-214ENST00000533595 ANKRD23Q86SG2 305 aa17.23■□□□□ 0.35
SF3B2-214ENST00000533595 FAM43AQ8N2R8 423 aa17.23■□□□□ 0.35
SF3B2-214ENST00000533595 CEP95Q96GE4 821 aa17.23■□□□□ 0.35
SF3B2-214ENST00000533595 KRT23Q9C075 422 aa17.23■□□□□ 0.35
SF3B2-214ENST00000533595 ZCCHC17Q9NP64 241 aaKnown RBP17.23■□□□□ 0.35
SF3B2-214ENST00000533595 MTMR4Q9NYA4 1195 aa17.23■□□□□ 0.35
SF3B2-214ENST00000533595 NYAP2Q9P242 653 aa17.23■□□□□ 0.35
SF3B2-214ENST00000533595 SLC27A2O14975 620 aa17.22■□□□□ 0.35
SF3B2-214ENST00000533595 TRDNQ13061 729 aa17.22■□□□□ 0.35
SF3B2-214ENST00000533595 DGKZQ13574 1117 aa17.22■□□□□ 0.35
SF3B2-214ENST00000533595 PPP4R3BQ5MIZ7 849 aa17.22■□□□□ 0.35
SF3B2-214ENST00000533595 RNF20Q5VTR2 975 aa17.22■□□□□ 0.35
SF3B2-214ENST00000533595 CREB3L3Q68CJ9 461 aa17.22■□□□□ 0.35
SF3B2-214ENST00000533595 GPAT2Q6NUI2 795 aa17.22■□□□□ 0.35
SF3B2-214ENST00000533595 EMILIN3Q9NT22 766 aa17.22■□□□□ 0.35
SF3B2-214ENST00000533595 SAGE1Q9NXZ1 904 aa17.22■□□□□ 0.35
SF3B2-214ENST00000533595 AGTPBP1Q9UPW5 1226 aa17.22■□□□□ 0.35
SF3B2-214ENST00000533595 TMX2Q9Y320 296 aa17.22■□□□□ 0.35
SF3B2-214ENST00000533595 B4E1Z4 1266 aa17.21■□□□□ 0.35
SF3B2-214ENST00000533595 E7EWF7 191 aa17.21■□□□□ 0.35
SF3B2-214ENST00000533595 PDHXO00330 501 aa17.21■□□□□ 0.35
SF3B2-214ENST00000533595 NMT2O60551 498 aa17.21■□□□□ 0.35
SF3B2-214ENST00000533595 KDM4AO75164 1064 aa17.21■□□□□ 0.35
SF3B2-214ENST00000533595 TTLL1O95922 423 aa17.21■□□□□ 0.35
SF3B2-214ENST00000533595 HSPA1AP0DMV8 641 aaKnown RBP17.21■□□□□ 0.35
SF3B2-214ENST00000533595 HSPA1BP0DMV9 641 aaKnown RBP17.21■□□□□ 0.35
SF3B2-214ENST00000533595 TREML2Q5T2D2 321 aa17.21■□□□□ 0.35
SF3B2-214ENST00000533595 C12orf42Q96LP6 360 aa17.21■□□□□ 0.35
SF3B2-214ENST00000533595 CLIP2Q9UDT6 1046 aa17.21■□□□□ 0.35
SF3B2-214ENST00000533595 TAF6LQ9Y6J9 622 aa17.21■□□□□ 0.35
SF3B2-214ENST00000533595 LOC285556D6RIA3 1793 aa17.2■□□□□ 0.34
SF3B2-214ENST00000533595 PABPC4Q13310 644 aaKnown RBP eCLIP17.2■□□□□ 0.34
SF3B2-214ENST00000533595 TAF1CQ15572 869 aaPredicted RBP17.2■□□□□ 0.34
SF3B2-214ENST00000533595 NKX2-3Q8TAU0 364 aa17.2■□□□□ 0.34
SF3B2-214ENST00000533595 IL17RBQ9NRM6 502 aa17.2■□□□□ 0.34
SF3B2-214ENST00000533595 TCP11L1Q9NUJ3 509 aa17.2■□□□□ 0.34
SF3B2-214ENST00000533595 SLC45A1Q9Y2W3 748 aa17.2■□□□□ 0.34
SF3B2-214ENST00000533595 EPB41L2O43491 1005 aaKnown RBP17.19■□□□□ 0.34
SF3B2-214ENST00000533595 STOX1Q6ZVD7 989 aa17.19■□□□□ 0.34
SF3B2-214ENST00000533595 RALYLQ86SE5 291 aaKnown RBP17.19■□□□□ 0.34
SF3B2-214ENST00000533595 IQCA1Q86XH1 822 aa17.19■□□□□ 0.34
SF3B2-214ENST00000533595 NCOA7Q8NI08 942 aa17.19■□□□□ 0.34
SF3B2-214ENST00000533595 LPAR1Q92633 364 aa17.19■□□□□ 0.34
SF3B2-214ENST00000533595 MKL1Q969V6 931 aa17.19■□□□□ 0.34
SF3B2-214ENST00000533595 CFHR5Q9BXR6 569 aa17.19■□□□□ 0.34
SF3B2-214ENST00000533595 VCPKMTQ9H867 229 aa17.19■□□□□ 0.34
SF3B2-214ENST00000533595 GOPCQ9HD26 462 aa17.19■□□□□ 0.34
SF3B2-214ENST00000533595 ZSWIM5Q9P217 1185 aa17.19■□□□□ 0.34
SF3B2-214ENST00000533595 SYNPO2Q9UMS6 1093 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms