RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 ABCB5Q2M3G0 1257 aa13.67□□□□□ -0.22
CLCF1-202ENST00000533438 SLFNL1Q499Z3 407 aa13.67□□□□□ -0.22
CLCF1-202ENST00000533438 POTEEQ6S8J3 1075 aa13.67□□□□□ -0.22
CLCF1-202ENST00000533438 KIAA1683Q9H0B3 1180 aa13.67□□□□□ -0.22
CLCF1-202ENST00000533438 MCM9Q9NXL9 1143 aa13.67□□□□□ -0.22
CLCF1-202ENST00000533438 RBPJLQ9UBG7 517 aa13.67□□□□□ -0.22
CLCF1-202ENST00000533438 CHGBP05060 677 aa13.66□□□□□ -0.22
CLCF1-202ENST00000533438 RAB3GAP1Q15042 981 aa13.66□□□□□ -0.22
CLCF1-202ENST00000533438 ZYXQ15942 572 aaKnown RBP13.66□□□□□ -0.22
CLCF1-202ENST00000533438 CHRDL2Q6WN34 429 aa13.66□□□□□ -0.22
CLCF1-202ENST00000533438 U2AF1L4Q8WU68 220 aaKnown RBP13.66□□□□□ -0.22
CLCF1-202ENST00000533438 GTF3C2Q8WUA4 911 aaPredicted RBP13.66□□□□□ -0.22
CLCF1-202ENST00000533438 HTATIP2Q9BUP3 242 aa13.66□□□□□ -0.22
CLCF1-202ENST00000533438 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.66□□□□□ -0.22
CLCF1-202ENST00000533438 ARMT1Q9H993 441 aa13.66□□□□□ -0.22
CLCF1-202ENST00000533438 CABP5Q9NP86 173 aa13.66□□□□□ -0.22
CLCF1-202ENST00000533438 PAK6Q9NQU5 681 aaPredicted RBP13.66□□□□□ -0.22
CLCF1-202ENST00000533438 COL6A3P12111 3177 aa13.66□□□□□ -0.22
CLCF1-202ENST00000533438 RLFQ13129 1914 aa13.66□□□□□ -0.22
CLCF1-202ENST00000533438 PRKAB2O43741 272 aa13.65□□□□□ -0.22
CLCF1-202ENST00000533438 MBD4O95243 580 aa13.65□□□□□ -0.22
CLCF1-202ENST00000533438 SGPL1O95470 568 aa13.65□□□□□ -0.22
CLCF1-202ENST00000533438 USP14P54578 494 aa13.65□□□□□ -0.22
CLCF1-202ENST00000533438 ERVK-9P63128 1117 aa13.65□□□□□ -0.22
CLCF1-202ENST00000533438 ERVK-24P63145 666 aa13.65□□□□□ -0.22
CLCF1-202ENST00000533438 UBE3CQ15386 1083 aa13.65□□□□□ -0.22
CLCF1-202ENST00000533438 Q3C1V9 767 aa13.65□□□□□ -0.22
CLCF1-202ENST00000533438 GPRC5AQ8NFJ5 357 aa13.65□□□□□ -0.22
CLCF1-202ENST00000533438 ACER1Q8TDN7 264 aa13.65□□□□□ -0.22
CLCF1-202ENST00000533438 DPF3Q92784 378 aa13.65□□□□□ -0.22
CLCF1-202ENST00000533438 FEZ1Q99689 392 aa13.65□□□□□ -0.22
CLCF1-202ENST00000533438 DCTPP1Q9H773 170 aa13.65□□□□□ -0.22
CLCF1-202ENST00000533438 ATP8A2Q9NTI2 1148 aa13.65□□□□□ -0.22
CLCF1-202ENST00000533438 TAOK2Q9UL54 1235 aa13.65□□□□□ -0.22
CLCF1-202ENST00000533438 NR2E3Q9Y5X4 410 aa13.65□□□□□ -0.22
CLCF1-202ENST00000533438 PARP14Q460N5 1801 aa13.64□□□□□ -0.23
CLCF1-202ENST00000533438 TRIOBPQ9H2D6 2365 aa13.64□□□□□ -0.23
CLCF1-202ENST00000533438 USP17L15C9J2P7 530 aa13.64□□□□□ -0.23
CLCF1-202ENST00000533438 USP17L13C9JLJ4 530 aa13.64□□□□□ -0.23
CLCF1-202ENST00000533438 USP17L11C9JVI0 530 aa13.64□□□□□ -0.23
CLCF1-202ENST00000533438 USP17L18D6R9N7 530 aa13.64□□□□□ -0.23
CLCF1-202ENST00000533438 USP17L22D6RA61 530 aa13.64□□□□□ -0.23
CLCF1-202ENST00000533438 USP17L17D6RBQ6 530 aa13.64□□□□□ -0.23
CLCF1-202ENST00000533438 USP17L19D6RCP7 530 aa13.64□□□□□ -0.23
CLCF1-202ENST00000533438 USP17L20D6RJB6 530 aa13.64□□□□□ -0.23
CLCF1-202ENST00000533438 CNMDO75829 334 aa13.64□□□□□ -0.23
CLCF1-202ENST00000533438 HMGCRP04035 888 aa13.64□□□□□ -0.23
CLCF1-202ENST00000533438 CYP2D6P10635 497 aa13.64□□□□□ -0.23
CLCF1-202ENST00000533438 VCAM1P19320 739 aa13.64□□□□□ -0.23
CLCF1-202ENST00000533438 USP17L24Q0WX57 530 aa13.64□□□□□ -0.23
CLCF1-202ENST00000533438 SEPT2Q15019 361 aa13.64□□□□□ -0.23
CLCF1-202ENST00000533438 LBX2Q6XYB7 198 aa13.64□□□□□ -0.23
CLCF1-202ENST00000533438 CATSPERGQ6ZRH7 1159 aa13.64□□□□□ -0.23
CLCF1-202ENST00000533438 SWAP70Q9UH65 585 aa13.64□□□□□ -0.23
CLCF1-202ENST00000533438 A0A0G2JMZ2 1700 aa13.64□□□□□ -0.23
CLCF1-202ENST00000533438 LAMA3Q16787 3333 aa13.63□□□□□ -0.23
CLCF1-202ENST00000533438 ALPK3Q96L96 1907 aa13.63□□□□□ -0.23
CLCF1-202ENST00000533438 A0A1W2PRG0 241 aa13.63□□□□□ -0.23
CLCF1-202ENST00000533438 MAPK4P31152 587 aa13.63□□□□□ -0.23
CLCF1-202ENST00000533438 SLC44A5Q8NCS7 719 aa13.63□□□□□ -0.23
CLCF1-202ENST00000533438 SOCS4Q8WXH5 440 aa13.63□□□□□ -0.23
CLCF1-202ENST00000533438 TRIB2Q92519 343 aa13.63□□□□□ -0.23
CLCF1-202ENST00000533438 USP6NLQ92738 828 aa13.63□□□□□ -0.23
CLCF1-202ENST00000533438 DEFB118Q96PH6 123 aa13.63□□□□□ -0.23
CLCF1-202ENST00000533438 PAGR1Q9BTK6 254 aa13.63□□□□□ -0.23
CLCF1-202ENST00000533438 CRISPLD2Q9H0B8 497 aa13.63□□□□□ -0.23
CLCF1-202ENST00000533438 PUS7LQ9H0K6 701 aaKnown RBP13.63□□□□□ -0.23
CLCF1-202ENST00000533438 PORCNQ9H237 461 aa13.63□□□□□ -0.23
CLCF1-202ENST00000533438 ECHDC1Q9NTX5 307 aa13.63□□□□□ -0.23
CLCF1-202ENST00000533438 RABGAP1Q9Y3P9 1069 aa13.63□□□□□ -0.23
CLCF1-202ENST00000533438 GREB1LQ9C091 1923 aaPredicted RBP13.62□□□□□ -0.23
CLCF1-202ENST00000533438 SMIM22K7EJ46 135 aa13.62□□□□□ -0.23
CLCF1-202ENST00000533438 NEFLP07196 543 aa13.62□□□□□ -0.23
CLCF1-202ENST00000533438 XRCC5P13010 732 aaKnown RBP13.62□□□□□ -0.23
CLCF1-202ENST00000533438 TRIM32Q13049 653 aa13.62□□□□□ -0.23
CLCF1-202ENST00000533438 MORN1Q5T089 497 aa13.62□□□□□ -0.23
CLCF1-202ENST00000533438 C12orf60Q5U649 245 aa13.62□□□□□ -0.23
CLCF1-202ENST00000533438 ZSCAN25Q6NSZ9 544 aa13.62□□□□□ -0.23
CLCF1-202ENST00000533438 GPR153Q6NV75 609 aa13.62□□□□□ -0.23
CLCF1-202ENST00000533438 TMEM179Q6ZVK1 233 aa13.62□□□□□ -0.23
CLCF1-202ENST00000533438 GPR142Q7Z601 462 aa13.62□□□□□ -0.23
CLCF1-202ENST00000533438 DYNLL2Q96FJ2 89 aa13.62□□□□□ -0.23
CLCF1-202ENST00000533438 NUDT12Q9BQG2 462 aa13.62□□□□□ -0.23
CLCF1-202ENST00000533438 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.62□□□□□ -0.231e-6■■■■■ 39.7
CLCF1-202ENST00000533438 RPTORQ8N122 1335 aa13.62□□□□□ -0.23
CLCF1-202ENST00000533438 SPDYE16A6NNV3 312 aaPredicted RBP13.61□□□□□ -0.23
CLCF1-202ENST00000533438 USP17L12C9JPN9 530 aa13.61□□□□□ -0.23
CLCF1-202ENST00000533438 USP17L21D6R901 530 aa13.61□□□□□ -0.23
CLCF1-202ENST00000533438 MPHOSPH10O00566 681 aaKnown RBP13.61□□□□□ -0.23
CLCF1-202ENST00000533438 FARP2O94887 1054 aaPredicted RBP13.61□□□□□ -0.23
CLCF1-202ENST00000533438 CYP2B6P20813 491 aa13.61□□□□□ -0.23
CLCF1-202ENST00000533438 MAP3K21Q5TCX8 1036 aa13.61□□□□□ -0.23
CLCF1-202ENST00000533438 C16orf86Q6ZW13 317 aa13.61□□□□□ -0.23
CLCF1-202ENST00000533438 KBTBD3Q8NAB2 608 aa13.61□□□□□ -0.23
CLCF1-202ENST00000533438 RPAP3Q9H6T3 665 aaPredicted RBP13.61□□□□□ -0.23
CLCF1-202ENST00000533438 PCDHB15Q9Y5E8 787 aa13.61□□□□□ -0.23
CLCF1-202ENST00000533438 SLC4A4Q9Y6R1 1079 aa13.61□□□□□ -0.23
CLCF1-202ENST00000533438 FRMPD3Q5JV73 1810 aa13.61□□□□□ -0.23
CLCF1-202ENST00000533438 ZNF236Q9UL36 1845 aa13.6□□□□□ -0.23
CLCF1-202ENST00000533438 CYP2D7A0A087X1C5 515 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms