RNA–Protein interactions for RNA: ENST00000529998.5

UBASH3B-205, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 4

Gene UBASH3B, Length 698 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-205ENST00000529998 ACER1Q8TDN7 264 aa10.34□□□□□ -0.75
UBASH3B-205ENST00000529998 CCDC17Q96LX7 622 aa10.34□□□□□ -0.75
UBASH3B-205ENST00000529998 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.34□□□□□ -0.75
UBASH3B-205ENST00000529998 CFHR5Q9BXR6 569 aa10.34□□□□□ -0.75
UBASH3B-205ENST00000529998 TBC1D2Q9BYX2 928 aa10.34□□□□□ -0.75
UBASH3B-205ENST00000529998 MKNK2Q9HBH9 465 aa10.34□□□□□ -0.75
UBASH3B-205ENST00000529998 ANAPC4Q9UJX5 808 aa10.34□□□□□ -0.75
UBASH3B-205ENST00000529998 LAMA4Q16363 1823 aa10.34□□□□□ -0.75
UBASH3B-205ENST00000529998 ZMYM6O95789 1325 aa10.33□□□□□ -0.76
UBASH3B-205ENST00000529998 MYH4Q9Y623 1939 aa10.33□□□□□ -0.76
UBASH3B-205ENST00000529998 A0A1W2PRG0 241 aa10.33□□□□□ -0.76
UBASH3B-205ENST00000529998 USP17L10C9JJH3 530 aa10.33□□□□□ -0.76
UBASH3B-205ENST00000529998 PDHXO00330 501 aa10.33□□□□□ -0.76
UBASH3B-205ENST00000529998 SGSM2O43147 1006 aa10.33□□□□□ -0.76
UBASH3B-205ENST00000529998 HAND2P61296 217 aa10.33□□□□□ -0.76
UBASH3B-205ENST00000529998 PTH1RQ03431 593 aa10.33□□□□□ -0.76
UBASH3B-205ENST00000529998 CRHR2Q13324 411 aa10.33□□□□□ -0.76
UBASH3B-205ENST00000529998 SH3D19Q5HYK7 790 aa10.33□□□□□ -0.76
UBASH3B-205ENST00000529998 TREML2Q5T2D2 321 aa10.33□□□□□ -0.76
UBASH3B-205ENST00000529998 TMEM179Q6ZVK1 233 aa10.33□□□□□ -0.76
UBASH3B-205ENST00000529998 FASTKD5Q7L8L6 764 aaKnown RBP10.33□□□□□ -0.76
UBASH3B-205ENST00000529998 RUFY2Q8WXA3 655 aa10.33□□□□□ -0.76
UBASH3B-205ENST00000529998 DSCC1Q9BVC3 393 aa10.33□□□□□ -0.76
UBASH3B-205ENST00000529998 NBPF3Q9H094 633 aa10.33□□□□□ -0.76
UBASH3B-205ENST00000529998 EMILIN3Q9NT22 766 aa10.33□□□□□ -0.76
UBASH3B-205ENST00000529998 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.33□□□□□ -0.76
UBASH3B-205ENST00000529998 RAD50Q92878 1312 aa10.33□□□□□ -0.76
UBASH3B-205ENST00000529998 C19orf81C9J6K1 198 aa10.32□□□□□ -0.76
UBASH3B-205ENST00000529998 SLC3A2P08195 630 aaKnown RBP10.32□□□□□ -0.76
UBASH3B-205ENST00000529998 PDE4BQ07343 736 aa10.32□□□□□ -0.76
UBASH3B-205ENST00000529998 TAF1CQ15572 869 aaPredicted RBP10.32□□□□□ -0.76
UBASH3B-205ENST00000529998 ZYXQ15942 572 aaKnown RBP10.32□□□□□ -0.76
UBASH3B-205ENST00000529998 FAM47AQ5JRC9 791 aa10.32□□□□□ -0.76
UBASH3B-205ENST00000529998 ZNF444Q8N0Y2 327 aaPredicted RBP10.32□□□□□ -0.76
UBASH3B-205ENST00000529998 PROCA1Q8NCQ7 364 aaPredicted RBP10.32□□□□□ -0.76
UBASH3B-205ENST00000529998 ZCCHC17Q9NP64 241 aaKnown RBP10.32□□□□□ -0.76
UBASH3B-205ENST00000529998 IGKV6D-41A0A0C4DH26 115 aa10.31□□□□□ -0.76
UBASH3B-205ENST00000529998 GPR25O00155 361 aa10.31□□□□□ -0.76
UBASH3B-205ENST00000529998 ZNF213O14771 459 aa10.31□□□□□ -0.76
UBASH3B-205ENST00000529998 FGRP09769 529 aa10.31□□□□□ -0.76
UBASH3B-205ENST00000529998 CYP2C8P10632 490 aa10.31□□□□□ -0.76
UBASH3B-205ENST00000529998 EEF2P13639 858 aaKnown RBP10.31□□□□□ -0.76
UBASH3B-205ENST00000529998 TFAP4Q01664 338 aa10.31□□□□□ -0.76
UBASH3B-205ENST00000529998 KIAA1755Q5JYT7 1200 aa10.31□□□□□ -0.76
UBASH3B-205ENST00000529998 USP17L2Q6R6M4 530 aa10.31□□□□□ -0.76
UBASH3B-205ENST00000529998 TBC1D10CQ8IV04 446 aa10.31□□□□□ -0.76
UBASH3B-205ENST00000529998 NKX2-3Q8TAU0 364 aa10.31□□□□□ -0.76
UBASH3B-205ENST00000529998 ESYT1Q9BSJ8 1104 aa10.31□□□□□ -0.76
UBASH3B-205ENST00000529998 KIAA1683Q9H0B3 1180 aa10.31□□□□□ -0.76
UBASH3B-205ENST00000529998 KANSL2Q9H9L4 492 aa10.31□□□□□ -0.76
UBASH3B-205ENST00000529998 ZNF287Q9HBT7 754 aa10.31□□□□□ -0.76
UBASH3B-205ENST00000529998 ZFYVE28Q9HCC9 887 aa10.31□□□□□ -0.76
UBASH3B-205ENST00000529998 PRDM10Q9NQV6 1147 aa10.31□□□□□ -0.76
UBASH3B-205ENST00000529998 AGTPBP1Q9UPW5 1226 aa10.31□□□□□ -0.76
UBASH3B-205ENST00000529998 ORC4O43929 436 aa10.3□□□□□ -0.76
UBASH3B-205ENST00000529998 TLR2O60603 784 aa10.3□□□□□ -0.76
UBASH3B-205ENST00000529998 ATP2B2Q01814 1243 aa10.3□□□□□ -0.76
UBASH3B-205ENST00000529998 ICA1Q05084 483 aa10.3□□□□□ -0.76
UBASH3B-205ENST00000529998 NOM1Q5C9Z4 860 aaKnown RBP10.3□□□□□ -0.76
UBASH3B-205ENST00000529998 AKNAD1Q5T1N1 836 aa10.3□□□□□ -0.76
UBASH3B-205ENST00000529998 COL13A1Q5TAT6 717 aaPredicted RBP10.3□□□□□ -0.76
UBASH3B-205ENST00000529998 NEDD1Q8NHV4 660 aa10.3□□□□□ -0.76
UBASH3B-205ENST00000529998 ZNF296Q8WUU4 475 aaPredicted RBP10.3□□□□□ -0.76
UBASH3B-205ENST00000529998 C12orf42Q96LP6 360 aa10.3□□□□□ -0.76
UBASH3B-205ENST00000529998 FEZ1Q99689 392 aa10.3□□□□□ -0.76
UBASH3B-205ENST00000529998 TMOD4Q9NZQ9 345 aa10.3□□□□□ -0.76
UBASH3B-205ENST00000529998 SLC45A1Q9Y2W3 748 aa10.3□□□□□ -0.76
UBASH3B-205ENST00000529998 TMX2Q9Y320 296 aa10.3□□□□□ -0.76
UBASH3B-205ENST00000529998 ZSWIM8A7E2V4 1837 aa10.3□□□□□ -0.76
UBASH3B-205ENST00000529998 ADGRA2Q96PE1 1338 aa10.3□□□□□ -0.76
UBASH3B-205ENST00000529998 RLFQ13129 1914 aa10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 PARP14Q460N5 1801 aa10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 RANBP6O60518 1105 aaKnown RBP10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 NMT2O60551 498 aa10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 CDC45O75419 566 aa10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 TSPY3P0CV98 308 aa10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 TSPY8P0CW00 308 aa10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 HOXA7P31268 230 aaPredicted RBP10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 USP14P54578 494 aa10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 CAP1Q01518 475 aa10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 RRP12Q5JTH9 1297 aaKnown RBP10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 C17orf99Q6UX52 265 aa10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 MFSD6Q6ZSS7 791 aa10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 STAG1Q8WVM7 1258 aa10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 MAP4K1Q92918 833 aa10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 CEP95Q96GE4 821 aa10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 LSG1Q9H089 658 aaKnown RBP10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 ASCC2Q9H1I8 757 aaPredicted RBP10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 ARHGEF10LQ9HCE6 1279 aa10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 IL17RBQ9NRM6 502 aa10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 TOMM22Q9NS69 142 aa10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 MTMR4Q9NYA4 1195 aa10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 NYAP2Q9P242 653 aa10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 CLIP2Q9UDT6 1046 aa10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 CPA4Q9UI42 421 aa10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 CTNNA3Q9UI47 895 aa10.29□□□□□ -0.76
UBASH3B-205ENST00000529998 PLIN4Q96Q06 1357 aa10.28□□□□□ -0.76
UBASH3B-205ENST00000529998 MGAMO43451 1857 aa10.28□□□□□ -0.76
UBASH3B-205ENST00000529998 TSPY2A6NKD2 308 aa10.28□□□□□ -0.76
UBASH3B-205ENST00000529998 FKTNO75072 461 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms