RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 IGF2BP3O00425 579 aaKnown RBP eCLIP7.65□□□□□ -1.18
CSDE1-212ENST00000529046 GRK4P32298 578 aa7.65□□□□□ -1.18
CSDE1-212ENST00000529046 CUX1P39880 1505 aa7.65□□□□□ -1.18
CSDE1-212ENST00000529046 RPL6Q02878 288 aaKnown RBP7.65□□□□□ -1.18
CSDE1-212ENST00000529046 PRKCQQ04759 706 aa7.65□□□□□ -1.18
CSDE1-212ENST00000529046 BNIP3Q12983 259 aa7.65□□□□□ -1.18
CSDE1-212ENST00000529046 GRIN2BQ13224 1484 aa7.65□□□□□ -1.18
CSDE1-212ENST00000529046 SLBPQ14493 270 aaKnown RBP eCLIP7.65□□□□□ -1.18
CSDE1-212ENST00000529046 BNC2Q6ZN30 1099 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-212ENST00000529046 FGD5Q6ZNL6 1462 aa7.65□□□□□ -1.18
CSDE1-212ENST00000529046 FAM214BQ7L5A3 538 aa7.65□□□□□ -1.18
CSDE1-212ENST00000529046 HID1Q8IV36 788 aa7.65□□□□□ -1.18
CSDE1-212ENST00000529046 HRASLS5Q96KN8 279 aa7.65□□□□□ -1.18
CSDE1-212ENST00000529046 FOXQ1Q9C009 403 aa7.65□□□□□ -1.18
CSDE1-212ENST00000529046 GOLGA2P5Q9HBQ8 144 aa7.65□□□□□ -1.18
CSDE1-212ENST00000529046 VAV3Q9UKW4 847 aa7.65□□□□□ -1.18
CSDE1-212ENST00000529046 SUPT16HQ9Y5B9 1047 aaKnown RBP7.65□□□□□ -1.18
CSDE1-212ENST00000529046 PRR36Q9H6K5 1346 aa7.64□□□□□ -1.19
CSDE1-212ENST00000529046 MINDY4BA8MYZ0 360 aa7.64□□□□□ -1.19
CSDE1-212ENST00000529046 PAX4O43316 350 aa7.64□□□□□ -1.19
CSDE1-212ENST00000529046 F13A1P00488 732 aa7.64□□□□□ -1.19
CSDE1-212ENST00000529046 ERCC5P28715 1186 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-212ENST00000529046 CAP2P40123 477 aa7.64□□□□□ -1.19
CSDE1-212ENST00000529046 MPP2Q14168 576 aa7.64□□□□□ -1.19
CSDE1-212ENST00000529046 PLCL1Q15111 1095 aa7.64□□□□□ -1.19
CSDE1-212ENST00000529046 NKG7Q16617 165 aa7.64□□□□□ -1.19
CSDE1-212ENST00000529046 DIEXFQ68CQ4 756 aaKnown RBP7.64□□□□□ -1.19
CSDE1-212ENST00000529046 CYB5RLQ6IPT4 315 aa7.64□□□□□ -1.19
CSDE1-212ENST00000529046 SPRED2Q7Z698 418 aa7.64□□□□□ -1.19
CSDE1-212ENST00000529046 WFDC3Q8IUB2 231 aa7.64□□□□□ -1.19
CSDE1-212ENST00000529046 KIAA0825Q8IV33 1275 aa7.64□□□□□ -1.19
CSDE1-212ENST00000529046 GOLM1Q8NBJ4 401 aa7.64□□□□□ -1.19
CSDE1-212ENST00000529046 EAF1Q96JC9 268 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-212ENST00000529046 MIPEPQ99797 713 aa7.64□□□□□ -1.19
CSDE1-212ENST00000529046 PRDM5Q9NQX1 630 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-212ENST00000529046 PLAGL2Q9UPG8 496 aa7.64□□□□□ -1.19
CSDE1-212ENST00000529046 GNAT3A8MTJ3 354 aa7.63□□□□□ -1.19
CSDE1-212ENST00000529046 SLITRK5O94991 958 aa7.63□□□□□ -1.19
CSDE1-212ENST00000529046 EOMESO95936 686 aa7.63□□□□□ -1.19
CSDE1-212ENST00000529046 CRKP46108 304 aa7.63□□□□□ -1.19
CSDE1-212ENST00000529046 AOC3Q16853 763 aa7.63□□□□□ -1.19
CSDE1-212ENST00000529046 CBLL1Q75N03 491 aa7.63□□□□□ -1.19
CSDE1-212ENST00000529046 SLITRK4Q8IW52 837 aa7.63□□□□□ -1.19
CSDE1-212ENST00000529046 MFSD2AQ8NA29 543 aa7.63□□□□□ -1.19
CSDE1-212ENST00000529046 JARID2Q92833 1246 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-212ENST00000529046 C8orf37Q96NL8 207 aa7.63□□□□□ -1.19
CSDE1-212ENST00000529046 TINF2Q9BSI4 451 aa7.63□□□□□ -1.19
CSDE1-212ENST00000529046 SPON2Q9BUD6 331 aa7.63□□□□□ -1.19
CSDE1-212ENST00000529046 TNKS2Q9H2K2 1166 aa7.63□□□□□ -1.19
CSDE1-212ENST00000529046 MAPK8IP1Q9UQF2 711 aa7.63□□□□□ -1.19
CSDE1-212ENST00000529046 ABCA10Q8WWZ4 1543 aa7.62□□□□□ -1.19
CSDE1-212ENST00000529046 SYNJ2O15056 1496 aa7.62□□□□□ -1.19
CSDE1-212ENST00000529046 CHD1O14646 1710 aa7.62□□□□□ -1.19
CSDE1-212ENST00000529046 CD8BP10966 210 aa7.62□□□□□ -1.19
CSDE1-212ENST00000529046 FAM160A1Q05DH4 1040 aa7.62□□□□□ -1.19
CSDE1-212ENST00000529046 SNAP47Q5SQN1 464 aa7.62□□□□□ -1.19
CSDE1-212ENST00000529046 TPX2Q9ULW0 747 aaKnown RBP7.62□□□□□ -1.19
CSDE1-212ENST00000529046 SNX11Q9Y5W9 270 aa7.62□□□□□ -1.19
CSDE1-212ENST00000529046 CLASP1Q7Z460 1538 aa7.62□□□□□ -1.19
CSDE1-212ENST00000529046 SNAPC4Q5SXM2 1469 aa7.62□□□□□ -1.19
CSDE1-212ENST00000529046 ARAP1Q96P48 1450 aa7.62□□□□□ -1.19
CSDE1-212ENST00000529046 CST3P01034 146 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-212ENST00000529046 PGRP06401 933 aa7.61□□□□□ -1.19
CSDE1-212ENST00000529046 CD96P40200 585 aa7.61□□□□□ -1.19
CSDE1-212ENST00000529046 PDE4BQ07343 736 aa7.61□□□□□ -1.19
CSDE1-212ENST00000529046 PRAMEF13Q5VWM6 474 aa7.61□□□□□ -1.19
CSDE1-212ENST00000529046 ACBD3Q9H3P7 528 aa7.61□□□□□ -1.19
CSDE1-212ENST00000529046 GAPVD1Q14C86 1478 aa7.61□□□□□ -1.19
CSDE1-212ENST00000529046 SYNJ1O43426 1573 aa7.6□□□□□ -1.19
CSDE1-212ENST00000529046 FUT4P22083 530 aa7.6□□□□□ -1.19
CSDE1-212ENST00000529046 ZNF792Q3KQV3 632 aa7.6□□□□□ -1.19
CSDE1-212ENST00000529046 ZNF746Q6NUN9 644 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-212ENST00000529046 LETMD1Q6P1Q0 360 aa7.6□□□□□ -1.19
CSDE1-212ENST00000529046 REC114Q7Z4M0 266 aa7.6□□□□□ -1.19
CSDE1-212ENST00000529046 SPACA3Q8IXA5 215 aa7.6□□□□□ -1.19
CSDE1-212ENST00000529046 SLC43A3Q8NBI5 491 aa7.6□□□□□ -1.19
CSDE1-212ENST00000529046 FBXO27Q8NI29 283 aa7.6□□□□□ -1.19
CSDE1-212ENST00000529046 XAGE3Q8WTP9 111 aa7.6□□□□□ -1.19
CSDE1-212ENST00000529046 SPATA32Q96LK8 384 aa7.6□□□□□ -1.19
CSDE1-212ENST00000529046 CCSER2Q9H7U1 834 aa7.6□□□□□ -1.19
CSDE1-212ENST00000529046 POLR3KQ9Y2Y1 108 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-212ENST00000529046 WRNQ14191 1432 aaPredicted RBP eCLIP7.6□□□□□ -1.19
CSDE1-212ENST00000529046 ATE1O95260 518 aa7.59□□□□□ -1.19
CSDE1-212ENST00000529046 BPNT1O95861 308 aa7.59□□□□□ -1.19
CSDE1-212ENST00000529046 CLCN7P51798 805 aa7.59□□□□□ -1.19
CSDE1-212ENST00000529046 ZC3H6P61129 1189 aaKnown RBP7.59□□□□□ -1.19
CSDE1-212ENST00000529046 PAK2Q13177 524 aa7.59□□□□□ -1.19
CSDE1-212ENST00000529046 NKPD1Q17RQ9 610 aa7.59□□□□□ -1.19
CSDE1-212ENST00000529046 SFRP5Q5T4F7 317 aa7.59□□□□□ -1.19
CSDE1-212ENST00000529046 LCE1DQ5T752 114 aa7.59□□□□□ -1.19
CSDE1-212ENST00000529046 ANGEL2Q5VTE6 544 aaKnown RBP7.59□□□□□ -1.19
CSDE1-212ENST00000529046 MRPL41Q8IXM3 137 aaKnown RBP7.59□□□□□ -1.19
CSDE1-212ENST00000529046 REXO1Q8N1G1 1221 aaKnown RBP7.59□□□□□ -1.19
CSDE1-212ENST00000529046 ASB11Q8WXH4 323 aa7.59□□□□□ -1.19
CSDE1-212ENST00000529046 GMLQ99445 158 aa7.59□□□□□ -1.19
CSDE1-212ENST00000529046 UBP1Q9NZI7 540 aa7.59□□□□□ -1.19
CSDE1-212ENST00000529046 TJP2Q9UDY2 1190 aa7.59□□□□□ -1.19
CSDE1-212ENST00000529046 SOX9P48436 509 aa7.58□□□□□ -1.2
CSDE1-212ENST00000529046 COL9A2Q14055 689 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-212ENST00000529046 SLC6A19Q695T7 634 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms