RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 GPSM2P81274 684 aa17.03■□□□□ 0.32
USP47-207ENST00000527733 PTPN14Q15678 1187 aa17.03■□□□□ 0.32
USP47-207ENST00000527733 GALNT17Q6IS24 598 aa17.03■□□□□ 0.32
USP47-207ENST00000527733 CCDC174Q6PII3 467 aa17.03■□□□□ 0.32
USP47-207ENST00000527733 RUFY1Q96T51 708 aa17.03■□□□□ 0.32
USP47-207ENST00000527733 RNF26Q9BY78 433 aaPredicted RBP17.03■□□□□ 0.32
USP47-207ENST00000527733 LRWD1Q9UFC0 647 aa17.03■□□□□ 0.32
USP47-207ENST00000527733 KIF13AQ9H1H9 1805 aa17.03■□□□□ 0.32
USP47-207ENST00000527733 USP42Q9H9J4 1324 aaKnown RBP17.02■□□□□ 0.32
USP47-207ENST00000527733 POLR2DO15514 142 aaKnown RBP17.02■□□□□ 0.32
USP47-207ENST00000527733 LMBRD1Q9NUN5 540 aa17.02■□□□□ 0.32
USP47-207ENST00000527733 BICDL2A1A5D9 508 aa17.02■□□□□ 0.32
USP47-207ENST00000527733 SH2B2O14492 632 aaPredicted RBP17.02■□□□□ 0.32
USP47-207ENST00000527733 TTLL1O95922 423 aa17.02■□□□□ 0.32
USP47-207ENST00000527733 SCARF1Q14162 830 aa17.02■□□□□ 0.32
USP47-207ENST00000527733 ENOX2Q16206 610 aaKnown RBP17.02■□□□□ 0.32
USP47-207ENST00000527733 BTBD18B2RXH4 712 aa17.02■□□□□ 0.31
USP47-207ENST00000527733 IRX3P78415 501 aaPredicted RBP17.02■□□□□ 0.31
USP47-207ENST00000527733 MCTP2Q6DN12 878 aa17.02■□□□□ 0.31
USP47-207ENST00000527733 USP37Q86T82 979 aa17.02■□□□□ 0.31
USP47-207ENST00000527733 NSUN7Q8NE18 718 aaKnown RBP17.02■□□□□ 0.31
USP47-207ENST00000527733 DNAI2Q9GZS0 605 aa17.02■□□□□ 0.31
USP47-207ENST00000527733 CLSTN2Q9H4D0 955 aa17.02■□□□□ 0.31
USP47-207ENST00000527733 PKD2L1Q9P0L9 805 aa17.02■□□□□ 0.31
USP47-207ENST00000527733 ZBTB21Q9ULJ3 1066 aa17.02■□□□□ 0.31
USP47-207ENST00000527733 MYO6Q9UM54 1294 aa17.02■□□□□ 0.31
USP47-207ENST00000527733 KIF1AQ12756 1690 aa17.02■□□□□ 0.31
USP47-207ENST00000527733 SP4Q02446 784 aa17.02■□□□□ 0.31
USP47-207ENST00000527733 HS2ST1Q7LGA3 356 aa17.02■□□□□ 0.31
USP47-207ENST00000527733 ZNF202O95125 648 aa17.01■□□□□ 0.31
USP47-207ENST00000527733 USP28Q96RU2 1077 aa17.01■□□□□ 0.31
USP47-207ENST00000527733 ASPRV1Q53RT3 343 aa17.01■□□□□ 0.31
USP47-207ENST00000527733 CCDC65Q8IXS2 484 aa17.01■□□□□ 0.31
USP47-207ENST00000527733 DYNLL2Q96FJ2 89 aa17.01■□□□□ 0.31
USP47-207ENST00000527733 RFX5P48382 616 aaPredicted RBP17.01■□□□□ 0.31
USP47-207ENST00000527733 CALCRLQ16602 461 aa17.01■□□□□ 0.31
USP47-207ENST00000527733 SPECC1Q5M775 1068 aa17.01■□□□□ 0.31
USP47-207ENST00000527733 PSTPIP2Q9H939 334 aa17.01■□□□□ 0.31
USP47-207ENST00000527733 HOMER2Q9NSB8 354 aa17.01■□□□□ 0.31
USP47-207ENST00000527733 BIN2Q9UBW5 565 aaPredicted RBP17.01■□□□□ 0.31
USP47-207ENST00000527733 IVNS1ABPQ9Y6Y0 642 aa17.01■□□□□ 0.31
USP47-207ENST00000527733 XRCC6P12956 609 aaKnown RBP eCLIP17■□□□□ 0.31
USP47-207ENST00000527733 STX17P56962 302 aa17■□□□□ 0.31
USP47-207ENST00000527733 PKP1Q13835 747 aa17■□□□□ 0.31
USP47-207ENST00000527733 FOXP4Q8IVH2 680 aaPredicted RBP17■□□□□ 0.31
USP47-207ENST00000527733 MYO3BQ8WXR4 1341 aa17■□□□□ 0.31
USP47-207ENST00000527733 GADD45BO75293 160 aaPredicted RBP17■□□□□ 0.31
USP47-207ENST00000527733 TMEM232C9JQI7 657 aa17■□□□□ 0.31
USP47-207ENST00000527733 FBXO11Q86XK2 927 aa17■□□□□ 0.31
USP47-207ENST00000527733 TAF4BQ92750 862 aa17■□□□□ 0.31
USP47-207ENST00000527733 STK24Q9Y6E0 443 aa17■□□□□ 0.31
USP47-207ENST00000527733 KIF5CO60282 957 aa17■□□□□ 0.31
USP47-207ENST00000527733 USO1O60763 962 aaKnown RBP17■□□□□ 0.31
USP47-207ENST00000527733 MYCLP12524 364 aaPredicted RBP17■□□□□ 0.31
USP47-207ENST00000527733 KRT13P13646 458 aa17■□□□□ 0.31
USP47-207ENST00000527733 PPP1R2P41236 205 aa17■□□□□ 0.31
USP47-207ENST00000527733 ADALQ6DHV7 355 aa17■□□□□ 0.31
USP47-207ENST00000527733 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17■□□□□ 0.311e-6■■□□□ 11.4
USP47-207ENST00000527733 IFNAR1P17181 557 aa16.99■□□□□ 0.31
USP47-207ENST00000527733 SH3RF3Q8TEJ3 882 aaPredicted RBP16.99■□□□□ 0.31
USP47-207ENST00000527733 SNX29Q8TEQ0 813 aa16.99■□□□□ 0.31
USP47-207ENST00000527733 ECE2O60344 883 aa16.99■□□□□ 0.31
USP47-207ENST00000527733 DESP17661 470 aa16.99■□□□□ 0.31
USP47-207ENST00000527733 ERCC4Q92889 916 aaPredicted RBP16.99■□□□□ 0.31
USP47-207ENST00000527733 GPKOWQ92917 476 aaPredicted RBP eCLIP16.99■□□□□ 0.31
USP47-207ENST00000527733 PNMA2Q9UL42 364 aa16.99■□□□□ 0.31
USP47-207ENST00000527733 MYOM1P52179 1685 aa16.99■□□□□ 0.31
USP47-207ENST00000527733 CHMP2AO43633 222 aa16.99■□□□□ 0.31
USP47-207ENST00000527733 CRKP46108 304 aa16.99■□□□□ 0.31
USP47-207ENST00000527733 CDK8P49336 464 aa16.99■□□□□ 0.31
USP47-207ENST00000527733 MYL5Q02045 173 aa16.99■□□□□ 0.31
USP47-207ENST00000527733 ALX1Q15699 326 aa16.99■□□□□ 0.31
USP47-207ENST00000527733 STAG1Q8WVM7 1258 aa16.99■□□□□ 0.31
USP47-207ENST00000527733 MRPL11Q9Y3B7 192 aaKnown RBP16.99■□□□□ 0.31
USP47-207ENST00000527733 ADGRB2O60241 1585 aa16.99■□□□□ 0.31
USP47-207ENST00000527733 SUPT20HL1Q3ZLR7 823 aa16.99■□□□□ 0.31
USP47-207ENST00000527733 HSP90B2PQ58FF3 399 aa16.98■□□□□ 0.31
USP47-207ENST00000527733 TNS2Q63HR2 1409 aa16.98■□□□□ 0.31
USP47-207ENST00000527733 FMNL1O95466 1100 aaPredicted RBP16.98■□□□□ 0.31
USP47-207ENST00000527733 DGKHQ86XP1 1220 aa16.98■□□□□ 0.31
USP47-207ENST00000527733 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.98■□□□□ 0.31
USP47-207ENST00000527733 USP8P40818 1118 aa16.98■□□□□ 0.31
USP47-207ENST00000527733 SPAG5Q96R06 1193 aa16.98■□□□□ 0.31
USP47-207ENST00000527733 TCHPQ9BT92 498 aa16.98■□□□□ 0.31
USP47-207ENST00000527733 PCDHA1Q9Y5I3 950 aa16.98■□□□□ 0.31
USP47-207ENST00000527733 BCL9O00512 1426 aa16.97■□□□□ 0.31
USP47-207ENST00000527733 AOC3Q16853 763 aa16.97■□□□□ 0.31
USP47-207ENST00000527733 TBC1D16Q8TBP0 767 aa16.97■□□□□ 0.31
USP47-207ENST00000527733 DKC1O60832 514 aaKnown RBP eCLIP16.97■□□□□ 0.31
USP47-207ENST00000527733 NCAPH2Q6IBW4 605 aa16.97■□□□□ 0.31
USP47-207ENST00000527733 KIF18AQ8NI77 898 aa16.97■□□□□ 0.31
USP47-207ENST00000527733 DCP1AQ9NPI6 582 aaPredicted RBP16.97■□□□□ 0.31
USP47-207ENST00000527733 ATP6V0A2Q9Y487 856 aa16.97■□□□□ 0.31
USP47-207ENST00000527733 UBN2Q6ZU65 1347 aa16.97■□□□□ 0.31
USP47-207ENST00000527733 GDF11O95390 407 aa16.97■□□□□ 0.31
USP47-207ENST00000527733 INF2Q27J81 1249 aa16.97■□□□□ 0.31
USP47-207ENST00000527733 FNBP4Q8N3X1 1017 aaPredicted RBP16.97■□□□□ 0.31
USP47-207ENST00000527733 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.97■□□□□ 0.31
USP47-207ENST00000527733 MROH7-TTC4A0A0A0MT08 1334 aa16.97■□□□□ 0.31
USP47-207ENST00000527733 IFT172Q9UG01 1749 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms