RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 SARSP49591 514 aaKnown RBP20.15■□□□□ 0.82
USH1C-205ENST00000527020 CCDC150Q8NCX0 1101 aa20.15■□□□□ 0.82
USH1C-205ENST00000527020 ARHGEF1Q92888 912 aaKnown RBP20.15■□□□□ 0.82
USH1C-205ENST00000527020 TNFRSF25Q93038 417 aa20.15■□□□□ 0.82
USH1C-205ENST00000527020 CRNKL1Q9BZJ0 848 aaKnown RBP20.15■□□□□ 0.82
USH1C-205ENST00000527020 ATP8A2Q9NTI2 1148 aa20.15■□□□□ 0.82
USH1C-205ENST00000527020 JAG2Q9Y219 1238 aa20.15■□□□□ 0.82
USH1C-205ENST00000527020 KRT2P35908 639 aa20.15■□□□□ 0.82
USH1C-205ENST00000527020 OLFM4Q6UX06 510 aa20.15■□□□□ 0.82
USH1C-205ENST00000527020 GRAMD1CQ8IYS0 662 aa20.15■□□□□ 0.82
USH1C-205ENST00000527020 XBP1P17861 261 aa20.14■□□□□ 0.81
USH1C-205ENST00000527020 SBK1Q52WX2 424 aa20.14■□□□□ 0.81
USH1C-205ENST00000527020 NOM1Q5C9Z4 860 aaKnown RBP20.14■□□□□ 0.81
USH1C-205ENST00000527020 FAM47AQ5JRC9 791 aa20.14■□□□□ 0.81
USH1C-205ENST00000527020 CEP135Q66GS9 1140 aa20.14■□□□□ 0.81
USH1C-205ENST00000527020 SRBD1Q8N5C6 995 aaKnown RBP20.14■□□□□ 0.81
USH1C-205ENST00000527020 FANCLQ9NW38 375 aa20.14■□□□□ 0.81
USH1C-205ENST00000527020 CCNL1Q9UK58 526 aaPredicted RBP20.14■□□□□ 0.81
USH1C-205ENST00000527020 PAXBP1Q9Y5B6 917 aa20.14■□□□□ 0.81
USH1C-205ENST00000527020 TRIM75PA6NK02 468 aa20.14■□□□□ 0.81
USH1C-205ENST00000527020 ZBTB22O15209 634 aa20.14■□□□□ 0.81
USH1C-205ENST00000527020 FAM182BQ5T319 152 aa20.14■□□□□ 0.81
USH1C-205ENST00000527020 TRMT1Q9NXH9 659 aaKnown RBP20.14■□□□□ 0.81
USH1C-205ENST00000527020 RTCBQ9Y3I0 505 aaKnown RBP20.14■□□□□ 0.81
USH1C-205ENST00000527020 TOM1O60784 492 aa20.13■□□□□ 0.81
USH1C-205ENST00000527020 E4F1Q66K89 784 aaPredicted RBP20.13■□□□□ 0.81
USH1C-205ENST00000527020 A0A087X0B3 334 aa20.12■□□□□ 0.81
USH1C-205ENST00000527020 UBASH3AP57075 661 aa20.12■□□□□ 0.81
USH1C-205ENST00000527020 MORC3Q14149 939 aa20.12■□□□□ 0.81
USH1C-205ENST00000527020 PDILTQ8N807 584 aa20.12■□□□□ 0.81
USH1C-205ENST00000527020 ARPP21Q9UBL0 812 aaPredicted RBP20.12■□□□□ 0.81
USH1C-205ENST00000527020 HOOK1Q9UJC3 728 aaKnown RBP20.12■□□□□ 0.81
USH1C-205ENST00000527020 SFPQP23246 707 aaKnown RBP eCLIP20.12■□□□□ 0.81
USH1C-205ENST00000527020 FMR1Q06787 632 aaKnown RBP eCLIP20.12■□□□□ 0.81
USH1C-205ENST00000527020 PTPN14Q15678 1187 aa20.12■□□□□ 0.81
USH1C-205ENST00000527020 RCSD1Q6JBY9 416 aa20.12■□□□□ 0.81
USH1C-205ENST00000527020 FNBP4Q8N3X1 1017 aaPredicted RBP20.12■□□□□ 0.81
USH1C-205ENST00000527020 SPATA20Q8TB22 786 aa20.12■□□□□ 0.81
USH1C-205ENST00000527020 ANKRD7Q92527 254 aa20.12■□□□□ 0.81
USH1C-205ENST00000527020 INTS13Q9NVM9 706 aa20.11■□□□□ 0.81
USH1C-205ENST00000527020 MKRN1Q9UHC7 482 aaKnown RBP20.11■□□□□ 0.81
USH1C-205ENST00000527020 TMEM232C9JQI7 657 aa20.11■□□□□ 0.81
USH1C-205ENST00000527020 MYO1BO43795 1136 aa20.11■□□□□ 0.81
USH1C-205ENST00000527020 ZNF827Q17R98 1081 aa20.11■□□□□ 0.81
USH1C-205ENST00000527020 TMED8Q6PL24 325 aaPredicted RBP20.11■□□□□ 0.81
USH1C-205ENST00000527020 CDK5RAP2Q96SN8 1893 aa20.1■□□□□ 0.81
USH1C-205ENST00000527020 SERPINC1P01008 464 aa20.1■□□□□ 0.81
USH1C-205ENST00000527020 USP17L8P0C7I0 530 aa20.1■□□□□ 0.81
USH1C-205ENST00000527020 KCNJ6P48051 423 aa20.1■□□□□ 0.81
USH1C-205ENST00000527020 SMARCE1Q969G3 411 aa20.1■□□□□ 0.81
USH1C-205ENST00000527020 EPSTI1Q96J88 318 aa20.1■□□□□ 0.81
USH1C-205ENST00000527020 MED15Q96RN5 788 aa20.1■□□□□ 0.81
USH1C-205ENST00000527020 ADAMTS3O15072 1205 aa20.1■□□□□ 0.81
USH1C-205ENST00000527020 CBFA2T2O43439 604 aa20.1■□□□□ 0.81
USH1C-205ENST00000527020 VEGFAP15692 232 aaPredicted RBP20.1■□□□□ 0.81
USH1C-205ENST00000527020 VSTM4Q8IW00 320 aa20.1■□□□□ 0.81
USH1C-205ENST00000527020 CTCFLQ8NI51 663 aaPredicted RBP20.1■□□□□ 0.81
USH1C-205ENST00000527020 ZNF592Q92610 1267 aa20.1■□□□□ 0.81
USH1C-205ENST00000527020 NAV1Q8NEY1 1877 aa20.09■□□□□ 0.81
USH1C-205ENST00000527020 CFAP100Q494V2 611 aa20.09■□□□□ 0.81
USH1C-205ENST00000527020 KANK3Q6NY19 840 aa20.09■□□□□ 0.81
USH1C-205ENST00000527020 DZIP1Q86YF9 867 aaKnown RBP20.09■□□□□ 0.81
USH1C-205ENST00000527020 MLKLQ8NB16 471 aa20.09■□□□□ 0.81
USH1C-205ENST00000527020 CCDC112Q8NEF3 446 aa20.09■□□□□ 0.81
USH1C-205ENST00000527020 NOL10Q9BSC4 688 aaKnown RBP20.09■□□□□ 0.81
USH1C-205ENST00000527020 ZNF18P17022 549 aa20.08■□□□□ 0.81
USH1C-205ENST00000527020 NCBP1Q09161 790 aaKnown RBP20.08■□□□□ 0.81
USH1C-205ENST00000527020 DHX8Q14562 1220 aaKnown RBP20.08■□□□□ 0.81
USH1C-205ENST00000527020 GRIK5Q16478 980 aa20.08■□□□□ 0.81
USH1C-205ENST00000527020 PTPN21Q16825 1174 aa20.08■□□□□ 0.81
USH1C-205ENST00000527020 TRIML1Q8N9V2 468 aa20.08■□□□□ 0.81
USH1C-205ENST00000527020 MCM9Q9NXL9 1143 aa20.08■□□□□ 0.81
USH1C-205ENST00000527020 TSPY2A6NKD2 308 aa20.08■□□□□ 0.8
USH1C-205ENST00000527020 ZNF174Q15697 407 aa20.08■□□□□ 0.8
USH1C-205ENST00000527020 SLC4A8Q2Y0W8 1093 aa20.08■□□□□ 0.8
USH1C-205ENST00000527020 SPTY2D1Q68D10 685 aaPredicted RBP20.08■□□□□ 0.8
USH1C-205ENST00000527020 SH3RF1Q7Z6J0 888 aa20.08■□□□□ 0.8
USH1C-205ENST00000527020 ENOX1Q8TC92 643 aaKnown RBP20.08■□□□□ 0.8
USH1C-205ENST00000527020 UBE2Q2Q8WVN8 375 aa20.08■□□□□ 0.8
USH1C-205ENST00000527020 SYMPKQ92797 1274 aaKnown RBP20.08■□□□□ 0.8
USH1C-205ENST00000527020 DHX58Q96C10 678 aa20.08■□□□□ 0.8
USH1C-205ENST00000527020 PPP1R13BQ96KQ4 1090 aa20.08■□□□□ 0.8
USH1C-205ENST00000527020 PSDA5PKW4 1024 aaPredicted RBP20.07■□□□□ 0.8
USH1C-205ENST00000527020 SCG2P13521 617 aa20.07■□□□□ 0.8
USH1C-205ENST00000527020 NFIXQ14938 502 aa20.07■□□□□ 0.8
USH1C-205ENST00000527020 PFKFB3Q16875 520 aaPredicted RBP20.07■□□□□ 0.8
USH1C-205ENST00000527020 TTC38Q5R3I4 469 aa20.07■□□□□ 0.8
USH1C-205ENST00000527020 C12orf60Q5U649 245 aa20.07■□□□□ 0.8
USH1C-205ENST00000527020 FERMT2Q96AC1 680 aa20.07■□□□□ 0.8
USH1C-205ENST00000527020 TMX1Q9H3N1 280 aa20.07■□□□□ 0.8
USH1C-205ENST00000527020 BRMS1Q9HCU9 246 aa20.07■□□□□ 0.8
USH1C-205ENST00000527020 IL17RBQ9NRM6 502 aa20.07■□□□□ 0.8
USH1C-205ENST00000527020 NFE2L3Q9Y4A8 694 aa20.07■□□□□ 0.8
USH1C-205ENST00000527020 GRAPQ13588 217 aa20.07■□□□□ 0.8
USH1C-205ENST00000527020 HSP90AA4PQ58FG1 418 aa20.07■□□□□ 0.8
USH1C-205ENST00000527020 TRMT44Q8IYL2 757 aaKnown RBP20.07■□□□□ 0.8
USH1C-205ENST00000527020 GRAPLQ8TC17 118 aaPredicted RBP20.07■□□□□ 0.8
USH1C-205ENST00000527020 BMP15O95972 392 aa20.06■□□□□ 0.8
USH1C-205ENST00000527020 SLFN14P0C7P3 912 aa20.06■□□□□ 0.8
USH1C-205ENST00000527020 ATP2C1P98194 919 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms