RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 TREHO43280 583 aa5.69□□□□□ -1.5
ECHDC1-219ENST00000526299 TPP2P29144 1249 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-219ENST00000526299 TIGD5Q53EQ6 642 aa5.69□□□□□ -1.5
ECHDC1-219ENST00000526299 ZNF605Q86T29 641 aa5.69□□□□□ -1.5
ECHDC1-219ENST00000526299 COX4I2Q96KJ9 171 aa5.69□□□□□ -1.5
ECHDC1-219ENST00000526299 Q96M66 194 aa5.69□□□□□ -1.5
ECHDC1-219ENST00000526299 DPH2Q9BQC3 489 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-219ENST00000526299 DUSP15Q9H1R2 295 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-219ENST00000526299 SNCAIPQ9Y6H5 919 aa5.69□□□□□ -1.5
ECHDC1-219ENST00000526299 FOXD2O60548 495 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-219ENST00000526299 BAHD1Q8TBE0 780 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-219ENST00000526299 PIWIL2Q8TC59 973 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-219ENST00000526299 ANKRD24Q8TF21 1146 aa5.68□□□□□ -1.5
ECHDC1-219ENST00000526299 BIN2Q9UBW5 565 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-219ENST00000526299 ZGLP1P0C6A0 271 aa5.67□□□□□ -1.5
ECHDC1-219ENST00000526299 GAB4Q2WGN9 574 aa5.67□□□□□ -1.5
ECHDC1-219ENST00000526299 IRF2BP1Q8IU81 584 aa5.67□□□□□ -1.5
ECHDC1-219ENST00000526299 PDZD8Q8NEN9 1154 aa5.67□□□□□ -1.5
ECHDC1-219ENST00000526299 KCNC2Q96PR1 638 aa5.67□□□□□ -1.5
ECHDC1-219ENST00000526299 SGPP1Q9BX95 441 aa5.67□□□□□ -1.5
ECHDC1-219ENST00000526299 TJP2Q9UDY2 1190 aa5.67□□□□□ -1.5
ECHDC1-219ENST00000526299 MAPK1P28482 360 aa5.66□□□□□ -1.5
ECHDC1-219ENST00000526299 MAPK8P45983 427 aa5.66□□□□□ -1.5
ECHDC1-219ENST00000526299 EGR3Q06889 387 aa5.66□□□□□ -1.5
ECHDC1-219ENST00000526299 SLC6A17Q9H1V8 727 aa5.66□□□□□ -1.5
ECHDC1-219ENST00000526299 GCM1Q9NP62 436 aa5.66□□□□□ -1.5
ECHDC1-219ENST00000526299 DUSP13Q9UII6 198 aa5.66□□□□□ -1.5
ECHDC1-219ENST00000526299 WWC3Q9ULE0 1092 aa5.66□□□□□ -1.5
ECHDC1-219ENST00000526299 CNOT6Q9ULM6 557 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-219ENST00000526299 GFRA2O00451 464 aa5.65□□□□□ -1.5
ECHDC1-219ENST00000526299 SEMA7AO75326 666 aa5.65□□□□□ -1.5
ECHDC1-219ENST00000526299 USP17L7P0C7H9 530 aa5.65□□□□□ -1.5
ECHDC1-219ENST00000526299 ETV3P41162 512 aa5.65□□□□□ -1.5
ECHDC1-219ENST00000526299 SEPT6Q14141 434 aa5.65□□□□□ -1.5
ECHDC1-219ENST00000526299 TMEM132EQ6IEE7 984 aa5.65□□□□□ -1.5
ECHDC1-219ENST00000526299 TTBK2Q6IQ55 1244 aa5.65□□□□□ -1.5
ECHDC1-219ENST00000526299 LILRA2Q8N149 483 aa5.65□□□□□ -1.5
ECHDC1-219ENST00000526299 DNAJB8Q8NHS0 232 aa5.65□□□□□ -1.5
ECHDC1-219ENST00000526299 FBF1Q8TES7 1133 aa5.65□□□□□ -1.5
ECHDC1-219ENST00000526299 INTS4Q96HW7 963 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-219ENST00000526299 TRIT1Q9H3H1 467 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-219ENST00000526299 PCDHB5Q9Y5E4 795 aa5.65□□□□□ -1.5
ECHDC1-219ENST00000526299 GIPC1O14908 333 aa5.64□□□□□ -1.51
ECHDC1-219ENST00000526299 PEX10O60683 326 aa5.64□□□□□ -1.51
ECHDC1-219ENST00000526299 TRIM13O60858 407 aa5.64□□□□□ -1.51
ECHDC1-219ENST00000526299 PGRP06401 933 aa5.64□□□□□ -1.51
ECHDC1-219ENST00000526299 TCERG1LQ5VWI1 586 aa5.64□□□□□ -1.51
ECHDC1-219ENST00000526299 MRPL41Q8IXM3 137 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-219ENST00000526299 OXR1Q8N573 874 aa5.64□□□□□ -1.51
ECHDC1-219ENST00000526299 MARCH10Q8NA82 808 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-219ENST00000526299 TMEM87BQ96K49 555 aa5.64□□□□□ -1.51
ECHDC1-219ENST00000526299 CWC22Q9HCG8 908 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-219ENST00000526299 YBX2Q9Y2T7 364 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-219ENST00000526299 KCTD3Q9Y597 815 aa5.64□□□□□ -1.51
ECHDC1-219ENST00000526299 ADAMTS20P59510 1910 aa5.64□□□□□ -1.51
ECHDC1-219ENST00000526299 TEX51A0A1B0GUA7 166 aa5.63□□□□□ -1.51
ECHDC1-219ENST00000526299 FITM1A5D6W6 292 aa5.63□□□□□ -1.51
ECHDC1-219ENST00000526299 PDE6BP35913 854 aa5.63□□□□□ -1.51
ECHDC1-219ENST00000526299 GALK1P51570 392 aa5.63□□□□□ -1.51
ECHDC1-219ENST00000526299 SSPNQ14714 243 aa5.63□□□□□ -1.51
ECHDC1-219ENST00000526299 NFIXQ14938 502 aa5.63□□□□□ -1.51
ECHDC1-219ENST00000526299 SLC6A19Q695T7 634 aa5.63□□□□□ -1.51
ECHDC1-219ENST00000526299 SV2BQ7L1I2 683 aa5.63□□□□□ -1.51
ECHDC1-219ENST00000526299 TSPYL5Q86VY4 417 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-219ENST00000526299 ZNF552Q9H707 407 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-219ENST00000526299 C12orf49Q9H741 205 aa5.63□□□□□ -1.51
ECHDC1-219ENST00000526299 GPATCH2Q9NW75 528 aa5.63□□□□□ -1.51
ECHDC1-219ENST00000526299 FAM8A1Q9UBU6 413 aa5.63□□□□□ -1.51
ECHDC1-219ENST00000526299 TTF2Q9UNY4 1162 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-219ENST00000526299 PCDHA11Q9Y5I1 949 aa5.63□□□□□ -1.51
ECHDC1-219ENST00000526299 SYN1P17600 705 aa5.62□□□□□ -1.51
ECHDC1-219ENST00000526299 LTKP29376 864 aa5.62□□□□□ -1.51
ECHDC1-219ENST00000526299 FMR1Q06787 632 aaKnown RBP eCLIP5.62□□□□□ -1.51
ECHDC1-219ENST00000526299 ZNF385BQ569K4 471 aa5.62□□□□□ -1.51
ECHDC1-219ENST00000526299 DTWD2Q8NBA8 298 aa5.62□□□□□ -1.51
ECHDC1-219ENST00000526299 GPR62Q9BZJ7 368 aa5.62□□□□□ -1.51
ECHDC1-219ENST00000526299 EBF1Q9UH73 591 aa5.62□□□□□ -1.51
ECHDC1-219ENST00000526299 GPR160Q9UJ42 338 aa5.62□□□□□ -1.51
ECHDC1-219ENST00000526299 CEP131Q9UPN4 1083 aa5.62□□□□□ -1.51
ECHDC1-219ENST00000526299 KRTAP10-2P60368 255 aa5.61□□□□□ -1.51
ECHDC1-219ENST00000526299 NR0B2Q15466 257 aa5.61□□□□□ -1.51
ECHDC1-219ENST00000526299 ALG1LQ6GMV1 187 aa5.61□□□□□ -1.51
ECHDC1-219ENST00000526299 PANK1Q8TE04 598 aa5.61□□□□□ -1.51
ECHDC1-219ENST00000526299 PPP1R13LQ8WUF5 828 aa5.61□□□□□ -1.51
ECHDC1-219ENST00000526299 ARID3AQ99856 593 aa5.61□□□□□ -1.51
ECHDC1-219ENST00000526299 SPG7Q9UQ90 795 aa5.61□□□□□ -1.51
ECHDC1-219ENST00000526299 TACC3Q9Y6A5 838 aa5.61□□□□□ -1.51
ECHDC1-219ENST00000526299 PSPNO60542 156 aa5.6□□□□□ -1.51
ECHDC1-219ENST00000526299 LRRN2O75325 713 aa5.6□□□□□ -1.51
ECHDC1-219ENST00000526299 PI3P19957 117 aa5.6□□□□□ -1.51
ECHDC1-219ENST00000526299 PDE4CQ08493 712 aa5.6□□□□□ -1.51
ECHDC1-219ENST00000526299 MCATQ8IVS2 390 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-219ENST00000526299 DHX38Q92620 1227 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-219ENST00000526299 ACSF2Q96CM8 615 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-219ENST00000526299 SHISA4Q96DD7 197 aa5.6□□□□□ -1.51
ECHDC1-219ENST00000526299 RTEL1Q9NZ71 1219 aa5.6□□□□□ -1.51
ECHDC1-219ENST00000526299 RFXAPO00287 272 aa5.59□□□□□ -1.51
ECHDC1-219ENST00000526299 LMNB1P20700 586 aa5.59□□□□□ -1.51
ECHDC1-219ENST00000526299 RPS26P62854 115 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-219ENST00000526299 SKOR2Q2VWA4 1001 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms