RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 ESYT1Q9BSJ8 1104 aa20.62■□□□□ 0.89
CCS-204ENST00000526066 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.62■□□□□ 0.89
CCS-204ENST00000526066 PAK6Q9NQU5 681 aaPredicted RBP20.62■□□□□ 0.89
CCS-204ENST00000526066 DLL1O00548 723 aa20.61■□□□□ 0.89
CCS-204ENST00000526066 GPAA1O43292 621 aa20.61■□□□□ 0.89
CCS-204ENST00000526066 NPM3O75607 178 aaKnown RBP20.61■□□□□ 0.89
CCS-204ENST00000526066 MBD4O95243 580 aa20.61■□□□□ 0.89
CCS-204ENST00000526066 MFAP1P55081 439 aaKnown RBP20.61■□□□□ 0.89
CCS-204ENST00000526066 SPP2Q13103 211 aa20.61■□□□□ 0.89
CCS-204ENST00000526066 TREML2Q5T2D2 321 aa20.61■□□□□ 0.89
CCS-204ENST00000526066 CCDC84Q86UT8 332 aaPredicted RBP20.61■□□□□ 0.89
CCS-204ENST00000526066 SLC17A8Q8NDX2 589 aa20.61■□□□□ 0.89
CCS-204ENST00000526066 PAWRQ96IZ0 340 aaKnown RBP20.61■□□□□ 0.89
CCS-204ENST00000526066 PRO3102Q9H379 93 aa20.61■□□□□ 0.89
CCS-204ENST00000526066 AS3MTQ9HBK9 375 aa20.61■□□□□ 0.89
CCS-204ENST00000526066 AATFQ9NY61 560 aaKnown RBP eCLIP20.61■□□□□ 0.89
CCS-204ENST00000526066 ATAD5Q96QE3 1844 aa20.6■□□□□ 0.89
CCS-204ENST00000526066 CCDC171Q6TFL3 1326 aa20.6■□□□□ 0.89
CCS-204ENST00000526066 LOC285556D6RIA3 1793 aa20.6■□□□□ 0.89
CCS-204ENST00000526066 HMGCRP04035 888 aa20.6■□□□□ 0.89
CCS-204ENST00000526066 RHBDL3P58872 404 aa20.6■□□□□ 0.89
CCS-204ENST00000526066 ANKLE1Q8NAG6 615 aa20.6■□□□□ 0.89
CCS-204ENST00000526066 STRBPQ96SI9 672 aaKnown RBP20.6■□□□□ 0.89
CCS-204ENST00000526066 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.6■□□□□ 0.89
CCS-204ENST00000526066 COL2A1P02458 1487 aaPredicted RBP20.59■□□□□ 0.89
CCS-204ENST00000526066 FAM196BA6NMK8 535 aa20.59■□□□□ 0.89
CCS-204ENST00000526066 EIF5BO60841 1220 aaKnown RBP20.59■□□□□ 0.89
CCS-204ENST00000526066 GNAT2P19087 354 aa20.59■□□□□ 0.89
CCS-204ENST00000526066 HMGCS2P54868 508 aa20.59■□□□□ 0.89
CCS-204ENST00000526066 DYNLL1P63167 89 aaKnown RBP20.59■□□□□ 0.89
CCS-204ENST00000526066 C8orf34Q49A92 452 aa20.59■□□□□ 0.89
CCS-204ENST00000526066 LCORLQ8N3X6 602 aa20.59■□□□□ 0.89
CCS-204ENST00000526066 CRISPLD2Q9H0B8 497 aa20.59■□□□□ 0.89
CCS-204ENST00000526066 ARMT1Q9H993 441 aa20.59■□□□□ 0.89
CCS-204ENST00000526066 USP17L5A8MUK1 530 aa20.58■□□□□ 0.89
CCS-204ENST00000526066 IRX3P78415 501 aaPredicted RBP20.58■□□□□ 0.89
CCS-204ENST00000526066 ZNF589Q86UQ0 364 aaPredicted RBP20.58■□□□□ 0.89
CCS-204ENST00000526066 TRIM34Q9BYJ4 488 aa20.58■□□□□ 0.89
CCS-204ENST00000526066 CRNKL1Q9BZJ0 848 aaKnown RBP20.58■□□□□ 0.89
CCS-204ENST00000526066 IL25Q9H293 177 aa20.58■□□□□ 0.89
CCS-204ENST00000526066 HMX1Q9NP08 348 aaPredicted RBP20.58■□□□□ 0.89
CCS-204ENST00000526066 DOCK3Q8IZD9 2030 aa20.58■□□□□ 0.88
CCS-204ENST00000526066 SLURP2P0DP57 97 aa20.57■□□□□ 0.88
CCS-204ENST00000526066 CCDC129Q6ZRS4 1044 aa20.57■□□□□ 0.88
CCS-204ENST00000526066 TEX11Q8IYF3 940 aa20.57■□□□□ 0.88
CCS-204ENST00000526066 TMOD4Q9NZQ9 345 aa20.57■□□□□ 0.88
CCS-204ENST00000526066 HERC5Q9UII4 1024 aaKnown RBP20.57■□□□□ 0.88
CCS-204ENST00000526066 CAP2P40123 477 aa20.56■□□□□ 0.88
CCS-204ENST00000526066 CCAR1Q8IX12 1150 aaKnown RBP20.56■□□□□ 0.88
CCS-204ENST00000526066 C7orf61Q8IZ16 206 aa20.56■□□□□ 0.88
CCS-204ENST00000526066 SH3RF3Q8TEJ3 882 aaPredicted RBP20.56■□□□□ 0.88
CCS-204ENST00000526066 NBPF3Q9H094 633 aa20.56■□□□□ 0.88
CCS-204ENST00000526066 ASCC2Q9H1I8 757 aaPredicted RBP20.56■□□□□ 0.88
CCS-204ENST00000526066 RPTORQ8N122 1335 aa20.55■□□□□ 0.88
CCS-204ENST00000526066 REC8O95072 547 aa20.54■□□□□ 0.88
CCS-204ENST00000526066 GIMAP6Q6P9H5 292 aa20.54■□□□□ 0.88
CCS-204ENST00000526066 KIAA1211Q6ZU35 1233 aa20.54■□□□□ 0.88
CCS-204ENST00000526066 DIS3LQ8TF46 1054 aaKnown RBP20.54■□□□□ 0.88
CCS-204ENST00000526066 DSCC1Q9BVC3 393 aa20.54■□□□□ 0.88
CCS-204ENST00000526066 DHX36Q9H2U1 1008 aaKnown RBP20.54■□□□□ 0.88
CCS-204ENST00000526066 ATP8A2Q9NTI2 1148 aa20.54■□□□□ 0.88
CCS-204ENST00000526066 PI4KBQ9UBF8 816 aa20.54■□□□□ 0.88
CCS-204ENST00000526066 SLC4A4Q9Y6R1 1079 aa20.54■□□□□ 0.88
CCS-204ENST00000526066 ALPK3Q96L96 1907 aa20.53■□□□□ 0.88
CCS-204ENST00000526066 GSG1L2A8MUP6 293 aa20.53■□□□□ 0.88
CCS-204ENST00000526066 PATL2C9JE40 543 aaKnown RBP20.53■□□□□ 0.88
CCS-204ENST00000526066 FOXP2O15409 715 aa20.53■□□□□ 0.88
CCS-204ENST00000526066 EPB41L2O43491 1005 aaKnown RBP20.53■□□□□ 0.88
CCS-204ENST00000526066 ASNSP08243 561 aa20.53■□□□□ 0.88
CCS-204ENST00000526066 HSPD1P10809 573 aaKnown RBP20.53■□□□□ 0.88
CCS-204ENST00000526066 CRACR2BQ8N4Y2 399 aaPredicted RBP20.53■□□□□ 0.88
CCS-204ENST00000526066 SOCS4Q8WXH5 440 aa20.53■□□□□ 0.88
CCS-204ENST00000526066 C11orf49Q9H6J7 331 aa20.53■□□□□ 0.88
CCS-204ENST00000526066 RANBP2P49792 3224 aaKnown RBP20.53■□□□□ 0.88
CCS-204ENST00000526066 PRKAB2O43741 272 aa20.52■□□□□ 0.88
CCS-204ENST00000526066 MTMR2Q13614 643 aa20.52■□□□□ 0.88
CCS-204ENST00000526066 ALX1Q15699 326 aa20.52■□□□□ 0.88
CCS-204ENST00000526066 SH3D19Q5HYK7 790 aa20.52■□□□□ 0.88
CCS-204ENST00000526066 VPS53Q5VIR6 699 aa20.52■□□□□ 0.88
CCS-204ENST00000526066 TRMT44Q8IYL2 757 aaKnown RBP20.52■□□□□ 0.88
CCS-204ENST00000526066 LSG1Q9H089 658 aaKnown RBP20.52■□□□□ 0.88
CCS-204ENST00000526066 CWC22Q9HCG8 908 aaKnown RBP20.52■□□□□ 0.88
CCS-204ENST00000526066 MORF4L1Q9UBU8 362 aa20.52■□□□□ 0.88
CCS-204ENST00000526066 ZMYND8Q9ULU4 1186 aaPredicted RBP20.52■□□□□ 0.88
CCS-204ENST00000526066 ZMYM6O95789 1325 aa20.52■□□□□ 0.87
CCS-204ENST00000526066 DDX60LQ5H9U9 1706 aaKnown RBP20.51■□□□□ 0.87
CCS-204ENST00000526066 BMP8BP34820 402 aa20.51■□□□□ 0.87
CCS-204ENST00000526066 USP5P45974 858 aa20.51■□□□□ 0.87
CCS-204ENST00000526066 GPRC5AQ8NFJ5 357 aa20.51■□□□□ 0.87
CCS-204ENST00000526066 TGFBRAP1Q8WUH2 860 aa20.51■□□□□ 0.87
CCS-204ENST00000526066 SDR42E1Q8WUS8 393 aa20.51■□□□□ 0.87
CCS-204ENST00000526066 DDRGK1Q96HY6 314 aa20.51■□□□□ 0.87
CCS-204ENST00000526066 LRCH3Q96II8 777 aa20.51■□□□□ 0.87
CCS-204ENST00000526066 NUDT12Q9BQG2 462 aa20.51■□□□□ 0.87
CCS-204ENST00000526066 NACAP1Q9BZK3 213 aa20.51■□□□□ 0.87
CCS-204ENST00000526066 DCP1AQ9NPI6 582 aaPredicted RBP20.51■□□□□ 0.87
CCS-204ENST00000526066 ANO2Q9NQ90 1003 aa20.51■□□□□ 0.87
CCS-204ENST00000526066 FLT1P17948 1338 aa20.51■□□□□ 0.87
CCS-204ENST00000526066 C19orf81C9J6K1 198 aa20.5■□□□□ 0.87
CCS-204ENST00000526066 SOX1O00570 391 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms