RNA–Protein interactions for RNA: ENST00000524568.1

NDUFS3-202, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 733 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-202ENST00000524568 RBPJLQ9UBG7 517 aa23.57■■□□□ 1.36
NDUFS3-202ENST00000524568 GJD2Q9UKL4 321 aa23.57■■□□□ 1.36
NDUFS3-202ENST00000524568 PARP14Q460N5 1801 aa23.56■■□□□ 1.36
NDUFS3-202ENST00000524568 Q3C1V9 767 aa23.56■■□□□ 1.36
NDUFS3-202ENST00000524568 COA7Q96BR5 231 aa23.56■■□□□ 1.36
NDUFS3-202ENST00000524568 C12orf42Q96LP6 360 aa23.56■■□□□ 1.36
NDUFS3-202ENST00000524568 YTHDC1Q96MU7 727 aaKnown RBP23.56■■□□□ 1.36
NDUFS3-202ENST00000524568 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.56■■□□□ 1.36
NDUFS3-202ENST00000524568 RNF208Q9H0X6 261 aa23.56■■□□□ 1.36
NDUFS3-202ENST00000524568 A0A1W2PRG0 241 aa23.55■■□□□ 1.36
NDUFS3-202ENST00000524568 TRIM32Q13049 653 aa23.55■■□□□ 1.36
NDUFS3-202ENST00000524568 UBE3CQ15386 1083 aa23.55■■□□□ 1.36
NDUFS3-202ENST00000524568 VCAM1P19320 739 aa23.54■■□□□ 1.36
NDUFS3-202ENST00000524568 CRBNQ96SW2 442 aa23.54■■□□□ 1.36
NDUFS3-202ENST00000524568 PAGR1Q9BTK6 254 aa23.54■■□□□ 1.36
NDUFS3-202ENST00000524568 KIAA1683Q9H0B3 1180 aa23.54■■□□□ 1.36
NDUFS3-202ENST00000524568 PORCNQ9H237 461 aa23.54■■□□□ 1.36
NDUFS3-202ENST00000524568 MPHOSPH10O00566 681 aaKnown RBP23.53■■□□□ 1.36
NDUFS3-202ENST00000524568 CNMDO75829 334 aa23.53■■□□□ 1.36
NDUFS3-202ENST00000524568 GJB1P08034 283 aa23.53■■□□□ 1.36
NDUFS3-202ENST00000524568 GJA8P48165 433 aa23.53■■□□□ 1.36
NDUFS3-202ENST00000524568 UBXN2AP68543 259 aa23.53■■□□□ 1.36
NDUFS3-202ENST00000524568 KIAA1755Q5JYT7 1200 aa23.53■■□□□ 1.36
NDUFS3-202ENST00000524568 PXYLP1Q8TE99 480 aa23.53■■□□□ 1.36
NDUFS3-202ENST00000524568 A0A0G2JMZ2 1700 aa23.53■■□□□ 1.36
NDUFS3-202ENST00000524568 ALPK3Q96L96 1907 aa23.53■■□□□ 1.36
NDUFS3-202ENST00000524568 GREB1LQ9C091 1923 aaPredicted RBP23.53■■□□□ 1.36
NDUFS3-202ENST00000524568 USP17L12C9JPN9 530 aa23.52■■□□□ 1.36
NDUFS3-202ENST00000524568 USP17L21D6R901 530 aa23.52■■□□□ 1.36
NDUFS3-202ENST00000524568 AKR1B1P15121 316 aa23.52■■□□□ 1.36
NDUFS3-202ENST00000524568 ERVK-9P63128 1117 aa23.52■■□□□ 1.36
NDUFS3-202ENST00000524568 ERVK-24P63145 666 aa23.52■■□□□ 1.36
NDUFS3-202ENST00000524568 GPRC5AQ8NFJ5 357 aa23.52■■□□□ 1.36
NDUFS3-202ENST00000524568 CABP5Q9NP86 173 aa23.52■■□□□ 1.36
NDUFS3-202ENST00000524568 ATP8A2Q9NTI2 1148 aa23.52■■□□□ 1.36
NDUFS3-202ENST00000524568 SLC4A4Q9Y6R1 1079 aa23.52■■□□□ 1.36
NDUFS3-202ENST00000524568 C12orf60Q5U649 245 aa23.51■■□□□ 1.35
NDUFS3-202ENST00000524568 UBE2Q1Q7Z7E8 422 aa23.51■■□□□ 1.35
NDUFS3-202ENST00000524568 SIAH1Q8IUQ4 282 aa23.51■■□□□ 1.35
NDUFS3-202ENST00000524568 U2AF1L4Q8WU68 220 aaKnown RBP23.51■■□□□ 1.35
NDUFS3-202ENST00000524568 OSBP2Q969R2 916 aa23.51■■□□□ 1.35
NDUFS3-202ENST00000524568 SLC34A2O95436 690 aa23.5■■□□□ 1.35
NDUFS3-202ENST00000524568 CATSPERGQ6ZRH7 1159 aa23.5■■□□□ 1.35
NDUFS3-202ENST00000524568 KBTBD3Q8NAB2 608 aa23.5■■□□□ 1.35
NDUFS3-202ENST00000524568 TRIB2Q92519 343 aa23.5■■□□□ 1.35
NDUFS3-202ENST00000524568 RPAP3Q9H6T3 665 aaPredicted RBP23.5■■□□□ 1.35
NDUFS3-202ENST00000524568 COL11A1P12107 1806 aaPredicted RBP23.49■■□□□ 1.35
NDUFS3-202ENST00000524568 USP17L15C9J2P7 530 aa23.49■■□□□ 1.35
NDUFS3-202ENST00000524568 USP17L13C9JLJ4 530 aa23.49■■□□□ 1.35
NDUFS3-202ENST00000524568 USP17L11C9JVI0 530 aa23.49■■□□□ 1.35
NDUFS3-202ENST00000524568 USP17L18D6R9N7 530 aa23.49■■□□□ 1.35
NDUFS3-202ENST00000524568 USP17L22D6RA61 530 aa23.49■■□□□ 1.35
NDUFS3-202ENST00000524568 USP17L17D6RBQ6 530 aa23.49■■□□□ 1.35
NDUFS3-202ENST00000524568 USP17L19D6RCP7 530 aa23.49■■□□□ 1.35
NDUFS3-202ENST00000524568 USP17L20D6RJB6 530 aa23.49■■□□□ 1.35
NDUFS3-202ENST00000524568 CYP2B6P20813 491 aa23.49■■□□□ 1.35
NDUFS3-202ENST00000524568 CDK8P49336 464 aa23.49■■□□□ 1.35
NDUFS3-202ENST00000524568 USP17L24Q0WX57 530 aa23.49■■□□□ 1.35
NDUFS3-202ENST00000524568 CTR9Q6PD62 1173 aa23.49■■□□□ 1.35
NDUFS3-202ENST00000524568 PI4K2BQ8TCG2 481 aa23.49■■□□□ 1.35
NDUFS3-202ENST00000524568 DEFB118Q96PH6 123 aa23.49■■□□□ 1.35
NDUFS3-202ENST00000524568 STRBPQ96SI9 672 aaKnown RBP23.49■■□□□ 1.35
NDUFS3-202ENST00000524568 PAK6Q9NQU5 681 aaPredicted RBP23.49■■□□□ 1.35
NDUFS3-202ENST00000524568 M0R2C6 588 aa23.48■■□□□ 1.35
NDUFS3-202ENST00000524568 USP14P54578 494 aa23.48■■□□□ 1.35
NDUFS3-202ENST00000524568 BTBD7Q9P203 1132 aa23.48■■□□□ 1.35
NDUFS3-202ENST00000524568 SWAP70Q9UH65 585 aa23.48■■□□□ 1.35
NDUFS3-202ENST00000524568 SPDYE16A6NNV3 312 aaPredicted RBP23.47■■□□□ 1.35
NDUFS3-202ENST00000524568 SGPL1O95470 568 aa23.47■■□□□ 1.35
NDUFS3-202ENST00000524568 ZSCAN25Q6NSZ9 544 aa23.47■■□□□ 1.35
NDUFS3-202ENST00000524568 TMEM179Q6ZVK1 233 aa23.47■■□□□ 1.35
NDUFS3-202ENST00000524568 C16orf86Q6ZW13 317 aa23.47■■□□□ 1.35
NDUFS3-202ENST00000524568 GPR142Q7Z601 462 aa23.47■■□□□ 1.35
NDUFS3-202ENST00000524568 EPB41L4AQ9HCS5 686 aaPredicted RBP23.47■■□□□ 1.35
NDUFS3-202ENST00000524568 FRMPD3Q5JV73 1810 aa23.47■■□□□ 1.35
NDUFS3-202ENST00000524568 GSG1L2A8MUP6 293 aa23.46■■□□□ 1.35
NDUFS3-202ENST00000524568 HMGCRP04035 888 aa23.46■■□□□ 1.35
NDUFS3-202ENST00000524568 NKX2-3Q8TAU0 364 aa23.46■■□□□ 1.35
NDUFS3-202ENST00000524568 USP6NLQ92738 828 aa23.46■■□□□ 1.35
NDUFS3-202ENST00000524568 GPATCH3Q96I76 525 aa23.46■■□□□ 1.35
NDUFS3-202ENST00000524568 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.46■■□□□ 1.35
NDUFS3-202ENST00000524568 SALL3Q9BXA9 1300 aa23.45■■□□□ 1.34
NDUFS3-202ENST00000524568 RNF113AO15541 343 aaKnown RBP23.45■■□□□ 1.34
NDUFS3-202ENST00000524568 CCL14Q16627 93 aa23.45■■□□□ 1.34
NDUFS3-202ENST00000524568 MORN1Q5T089 497 aa23.45■■□□□ 1.34
NDUFS3-202ENST00000524568 STK11IPQ8N1F8 1099 aa23.45■■□□□ 1.34
NDUFS3-202ENST00000524568 APPBP2Q92624 585 aa23.45■■□□□ 1.34
NDUFS3-202ENST00000524568 SEC62Q99442 399 aaKnown RBP23.45■■□□□ 1.34
NDUFS3-202ENST00000524568 RABGAP1Q9Y3P9 1069 aa23.45■■□□□ 1.34
NDUFS3-202ENST00000524568 MYH4Q9Y623 1939 aa23.45■■□□□ 1.34
NDUFS3-202ENST00000524568 FARP2O94887 1054 aaPredicted RBP23.44■■□□□ 1.34
NDUFS3-202ENST00000524568 MAPK4P31152 587 aa23.44■■□□□ 1.34
NDUFS3-202ENST00000524568 ICA1Q05084 483 aa23.44■■□□□ 1.34
NDUFS3-202ENST00000524568 SPICE1Q8N0Z3 855 aa23.44■■□□□ 1.34
NDUFS3-202ENST00000524568 GTF3C2Q8WUA4 911 aaPredicted RBP23.44■■□□□ 1.34
NDUFS3-202ENST00000524568 NUDT12Q9BQG2 462 aa23.44■■□□□ 1.34
NDUFS3-202ENST00000524568 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.44■■□□□ 1.34
NDUFS3-202ENST00000524568 H0YGN5 161 aa23.43■■□□□ 1.34
NDUFS3-202ENST00000524568 GPAA1O43292 621 aa23.43■■□□□ 1.34
NDUFS3-202ENST00000524568 LBX2Q6XYB7 198 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms