RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 TBATAQ96M53 351 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 ZMAT2Q96NC0 199 aaKnown RBP7.39□□□□□ -1.23
SDC2-208ENST00000523877 HAUS7Q99871 368 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 A1CFQ9NQ94 594 aaKnown RBP7.39□□□□□ -1.23
SDC2-208ENST00000523877 SNRKQ9NRH2 765 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 HOMER3Q9NSC5 361 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 SEPT11Q9NVA2 429 aaKnown RBP7.39□□□□□ -1.23
SDC2-208ENST00000523877 ANKIB1Q9P2G1 1089 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 TTLL3Q9Y4R7 772 aa7.39□□□□□ -1.23
SDC2-208ENST00000523877 SETD1BQ9UPS6 1966 aaKnown RBP7.39□□□□□ -1.23
SDC2-208ENST00000523877 EIF4G3O43432 1585 aaKnown RBP7.38□□□□□ -1.23
SDC2-208ENST00000523877 GPRASP1Q5JY77 1395 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 GOLGA8AA7E2F4 631 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 HNRNPCL2B2RXH8 293 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 AKR1B15C9JRZ8 316 aaPredicted RBP7.38□□□□□ -1.23
SDC2-208ENST00000523877 MYO1CO00159 1063 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 TTI1O43156 1089 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 RASA4O43374 803 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 HNRNPCL1O60812 293 aaKnown RBP7.38□□□□□ -1.23
SDC2-208ENST00000523877 YEATS4O95619 227 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 SLC5A1P13866 664 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 PTPREP23469 700 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 CHMLP26374 656 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 DDIT3P35638 169 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 PEX5P50542 639 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 AKAP17AQ02040 695 aaKnown RBP7.38□□□□□ -1.23
SDC2-208ENST00000523877 TUBA3CQ13748 450 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 COG2Q14746 738 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 TSGA10IPQ3SY00 556 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 WDR44Q5JSH3 913 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 METTL24Q5JXM2 366 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 IFFO2Q5TF58 517 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 SWSAP1Q6NVH7 229 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 ABRAXAS1Q6UWZ7 409 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.38□□□□□ -1.23
SDC2-208ENST00000523877 SMYD1Q8NB12 490 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 TBC1D5Q92609 795 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 EXOC4Q96A65 974 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 THAP11Q96EK4 314 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 DDX11Q96FC9 970 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 GMLQ99445 158 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 TGIF2Q9GZN2 237 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 CSRNP2Q9H175 543 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 C9orf78Q9NZ63 289 aaPredicted RBP7.38□□□□□ -1.23
SDC2-208ENST00000523877 HDAC6Q9UBN7 1215 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 TAGLN3Q9UI15 199 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 CARD8Q9Y2G2 431 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 MAGED1Q9Y5V3 778 aaPredicted RBP7.38□□□□□ -1.23
SDC2-208ENST00000523877 CHD1O14646 1710 aa7.38□□□□□ -1.23
SDC2-208ENST00000523877 IBTKQ9P2D0 1353 aaPredicted RBP7.37□□□□□ -1.23
SDC2-208ENST00000523877 MINK1Q8N4C8 1332 aaPredicted RBP7.37□□□□□ -1.23
SDC2-208ENST00000523877 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.37□□□□□ -1.23
SDC2-208ENST00000523877 ELL2O00472 640 aaPredicted RBP7.37□□□□□ -1.23
SDC2-208ENST00000523877 ZBTB39O15060 712 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 ERC2O15083 957 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 PPP1R12BO60237 982 aaPredicted RBP7.37□□□□□ -1.23
SDC2-208ENST00000523877 TADA3O75528 432 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 ZNF189O75820 626 aaPredicted RBP7.37□□□□□ -1.23
SDC2-208ENST00000523877 CYP1A2P05177 515 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 ATF3P18847 181 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 TMOD1P28289 359 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 GABREP78334 506 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 ROR1Q01973 937 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 LRRC74AQ0VAA2 488 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 PAK2Q13177 524 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 GPS2Q13227 327 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 NEDD9Q14511 834 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 WASHC4Q2M389 1173 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 PLEKHG4Q58EX7 1191 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 SLC10A5Q5PT55 438 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 EMC10Q5UCC4 262 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 CAPRIN2Q6IMN6 1127 aaKnown RBP7.37□□□□□ -1.23
SDC2-208ENST00000523877 GALNT17Q6IS24 598 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 DSTYKQ6XUX3 929 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 RPAP2Q8IXW5 612 aaPredicted RBP7.37□□□□□ -1.23
SDC2-208ENST00000523877 LINC00469Q8N7U9 141 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 FAM81AQ8TBF8 368 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 NUDT16Q96DE0 195 aaKnown RBP7.37□□□□□ -1.23
SDC2-208ENST00000523877 JPH4Q96JJ6 628 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 NELL2Q99435 816 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 ADAM33Q9BZ11 813 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 MRPL46Q9H2W6 279 aaKnown RBP7.37□□□□□ -1.23
SDC2-208ENST00000523877 OSBPL3Q9H4L5 887 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 STAP2Q9UGK3 403 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 CROTQ9UKG9 612 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 PNMA8BQ9ULN7 279 aaPredicted RBP7.37□□□□□ -1.23
SDC2-208ENST00000523877 PCDHGB3Q9Y5G1 929 aa7.37□□□□□ -1.23
SDC2-208ENST00000523877 A0A0G2JS52 829 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 A6NCN8 305 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 GOLGA6L4A6NEF3 574 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 SART1O43290 800 aaKnown RBP7.36□□□□□ -1.23
SDC2-208ENST00000523877 SNX2O60749 519 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 BAG2O95816 211 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 RPS2P15880 293 aaKnown RBP7.36□□□□□ -1.23
SDC2-208ENST00000523877 ATP5DP30049 168 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 CYP2C19P33261 490 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 TCF7P36402 384 aaPredicted RBP7.36□□□□□ -1.23
SDC2-208ENST00000523877 SKIV2L2P42285 1042 aaKnown RBP7.36□□□□□ -1.23
SDC2-208ENST00000523877 EPS15P42566 896 aa7.36□□□□□ -1.23
SDC2-208ENST00000523877 SARSP49591 514 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms