RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 NME1P15531 152 aaKnown RBP9.44□□□□□ -0.9
CPNE3-206ENST00000523469 GRIK1P39086 918 aa9.44□□□□□ -0.9
CPNE3-206ENST00000523469 EIF6P56537 245 aaKnown RBP9.44□□□□□ -0.9
CPNE3-206ENST00000523469 DNAJB8Q8NHS0 232 aa9.44□□□□□ -0.9
CPNE3-206ENST00000523469 PPP1R13LQ8WUF5 828 aa9.44□□□□□ -0.9
CPNE3-206ENST00000523469 GMLQ99445 158 aa9.44□□□□□ -0.9
CPNE3-206ENST00000523469 KIF2CQ99661 725 aa9.44□□□□□ -0.9
CPNE3-206ENST00000523469 MAPK8IP1Q9UQF2 711 aa9.44□□□□□ -0.9
CPNE3-206ENST00000523469 RGS13O14921 159 aa9.43□□□□□ -0.9
CPNE3-206ENST00000523469 CYP7A1P22680 504 aa9.43□□□□□ -0.9
CPNE3-206ENST00000523469 GBP1P32455 592 aa9.43□□□□□ -0.9
CPNE3-206ENST00000523469 INTS3Q68E01 1043 aaKnown RBP9.43□□□□□ -0.9
CPNE3-206ENST00000523469 INTS5Q6P9B9 1019 aaKnown RBP9.43□□□□□ -0.9
CPNE3-206ENST00000523469 CDH24Q86UP0 819 aa9.43□□□□□ -0.9
CPNE3-206ENST00000523469 OR6P1Q8NGX9 317 aa9.43□□□□□ -0.9
CPNE3-206ENST00000523469 COX4I2Q96KJ9 171 aa9.43□□□□□ -0.9
CPNE3-206ENST00000523469 HEXIM2Q96MH2 286 aaKnown RBP9.43□□□□□ -0.9
CPNE3-206ENST00000523469 TM9SF2Q99805 663 aa9.43□□□□□ -0.9
CPNE3-206ENST00000523469 MKNK2Q9HBH9 465 aa9.43□□□□□ -0.9
CPNE3-206ENST00000523469 LRRC4CQ9HCJ2 640 aa9.43□□□□□ -0.9
CPNE3-206ENST00000523469 TNFRSF10CO14798 259 aa9.42□□□□□ -0.9
CPNE3-206ENST00000523469 DNAJA1P31689 397 aaKnown RBP9.42□□□□□ -0.9
CPNE3-206ENST00000523469 CCNFP41002 786 aa9.42□□□□□ -0.9
CPNE3-206ENST00000523469 GIPRP48546 466 aa9.42□□□□□ -0.9
CPNE3-206ENST00000523469 SFRP5Q5T4F7 317 aa9.42□□□□□ -0.9
CPNE3-206ENST00000523469 LSRQ86X29 649 aaPredicted RBP9.42□□□□□ -0.9
CPNE3-206ENST00000523469 TAB3Q8N5C8 712 aaPredicted RBP9.42□□□□□ -0.9
CPNE3-206ENST00000523469 BAHD1Q8TBE0 780 aaPredicted RBP9.42□□□□□ -0.9
CPNE3-206ENST00000523469 SHDQ96IW2 340 aa9.42□□□□□ -0.9
CPNE3-206ENST00000523469 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.42□□□□□ -0.9
CPNE3-206ENST00000523469 COBLO75128 1261 aa9.41□□□□□ -0.9
CPNE3-206ENST00000523469 FGRP09769 529 aa9.41□□□□□ -0.9
CPNE3-206ENST00000523469 ARHGAP27Q6ZUM4 889 aa9.41□□□□□ -0.9
CPNE3-206ENST00000523469 RB1CC1Q8TDY2 1594 aa9.41□□□□□ -0.9
CPNE3-206ENST00000523469 SSBP05455 408 aaKnown RBP eCLIP9.4□□□□□ -0.9
CPNE3-206ENST00000523469 HOXA10P31260 410 aaPredicted RBP9.4□□□□□ -0.9
CPNE3-206ENST00000523469 OXCT1P55809 520 aa9.4□□□□□ -0.9
CPNE3-206ENST00000523469 C22orf34Q6ZV56 151 aa9.4□□□□□ -0.9
CPNE3-206ENST00000523469 FAM181AQ8N9Y4 354 aa9.4□□□□□ -0.9
CPNE3-206ENST00000523469 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.4□□□□□ -0.9
CPNE3-206ENST00000523469 CNTNAP4Q9C0A0 1308 aa9.39□□□□□ -0.91
CPNE3-206ENST00000523469 GNAT3A8MTJ3 354 aa9.39□□□□□ -0.91
CPNE3-206ENST00000523469 UBOX5O94941 541 aa9.39□□□□□ -0.91
CPNE3-206ENST00000523469 GUCY2CP25092 1073 aa9.39□□□□□ -0.91
CPNE3-206ENST00000523469 POLR2BP30876 1174 aaKnown RBP9.39□□□□□ -0.91
CPNE3-206ENST00000523469 CHMP4BP1P59074 171 aa9.39□□□□□ -0.91
CPNE3-206ENST00000523469 SLC9A7Q96T83 725 aa9.39□□□□□ -0.91
CPNE3-206ENST00000523469 ZNF865P0CJ78 1059 aaPredicted RBP9.38□□□□□ -0.91
CPNE3-206ENST00000523469 ACRP10323 421 aa9.38□□□□□ -0.91
CPNE3-206ENST00000523469 KIR3DL1P43629 444 aa9.38□□□□□ -0.91
CPNE3-206ENST00000523469 ZMYM1Q5SVZ6 1142 aa9.38□□□□□ -0.91
CPNE3-206ENST00000523469 RUFY4Q6ZNE9 571 aa9.38□□□□□ -0.91
CPNE3-206ENST00000523469 MCF2L2Q86YR7 1114 aa9.38□□□□□ -0.91
CPNE3-206ENST00000523469 RNF141Q8WVD5 230 aa9.38□□□□□ -0.91
CPNE3-206ENST00000523469 KREMEN1Q96MU8 473 aa9.38□□□□□ -0.91
CPNE3-206ENST00000523469 ZC3H7BQ9UGR2 993 aaKnown RBP9.38□□□□□ -0.91
CPNE3-206ENST00000523469 CEACAM5P06731 702 aa9.37□□□□□ -0.91
CPNE3-206ENST00000523469 CD97P48960 835 aa9.37□□□□□ -0.91
CPNE3-206ENST00000523469 MSMPQ1L6U9 139 aa9.37□□□□□ -0.91
CPNE3-206ENST00000523469 C19orf47Q8N9M1 422 aaKnown RBP9.37□□□□□ -0.91
CPNE3-206ENST00000523469 NETO1Q8TDF5 533 aa9.37□□□□□ -0.91
CPNE3-206ENST00000523469 ANAPC16Q96DE5 110 aa9.37□□□□□ -0.91
CPNE3-206ENST00000523469 U3KQE9 123 aa9.37□□□□□ -0.91
CPNE3-206ENST00000523469 COL17A1Q9UMD9 1497 aaPredicted RBP9.36□□□□□ -0.91
CPNE3-206ENST00000523469 MFSD4AQ8N468 514 aa9.36□□□□□ -0.91
CPNE3-206ENST00000523469 DHRS1Q96LJ7 313 aa9.36□□□□□ -0.91
CPNE3-206ENST00000523469 FBXL18Q96ME1 805 aa9.36□□□□□ -0.91
CPNE3-206ENST00000523469 ASPNQ9BXN1 380 aa9.36□□□□□ -0.91
CPNE3-206ENST00000523469 SLC12A7Q9Y666 1083 aa9.36□□□□□ -0.91
CPNE3-206ENST00000523469 PRR33A8MZF0 331 aa9.35□□□□□ -0.91
CPNE3-206ENST00000523469 CLEC3AO75596 197 aa9.35□□□□□ -0.91
CPNE3-206ENST00000523469 CBX7O95931 251 aa9.35□□□□□ -0.91
CPNE3-206ENST00000523469 ITIH2P19823 946 aa9.35□□□□□ -0.91
CPNE3-206ENST00000523469 SSTR4P31391 388 aa9.35□□□□□ -0.91
CPNE3-206ENST00000523469 RNF4P78317 190 aa9.35□□□□□ -0.91
CPNE3-206ENST00000523469 IFI16Q16666 785 aaKnown RBP9.35□□□□□ -0.91
CPNE3-206ENST00000523469 PLD6Q8N2A8 252 aaKnown RBP9.35□□□□□ -0.91
CPNE3-206ENST00000523469 PLAGL2Q9UPG8 496 aa9.35□□□□□ -0.91
CPNE3-206ENST00000523469 CAPN6Q9Y6Q1 641 aa9.35□□□□□ -0.91
CPNE3-206ENST00000523469 KIAA1324LA8MWY0 1029 aaPredicted RBP9.34□□□□□ -0.91
CPNE3-206ENST00000523469 FAM155AB1AL88 458 aaPredicted RBP9.34□□□□□ -0.91
CPNE3-206ENST00000523469 MED26O95402 600 aa9.34□□□□□ -0.91
CPNE3-206ENST00000523469 CASP7P55210 303 aa9.34□□□□□ -0.91
CPNE3-206ENST00000523469 NKPD1Q17RQ9 610 aa9.34□□□□□ -0.91
CPNE3-206ENST00000523469 UNC5AQ6ZN44 842 aa9.34□□□□□ -0.91
CPNE3-206ENST00000523469 TTC6Q86TZ1 520 aa9.34□□□□□ -0.91
CPNE3-206ENST00000523469 TMEM192Q8IY95 271 aa9.34□□□□□ -0.91
CPNE3-206ENST00000523469 FAM169BQ8N8A8 192 aa9.34□□□□□ -0.91
CPNE3-206ENST00000523469 PIWIL2Q8TC59 973 aaKnown RBP9.34□□□□□ -0.91
CPNE3-206ENST00000523469 VWCEQ96DN2 955 aa9.34□□□□□ -0.91
CPNE3-206ENST00000523469 SLC6A18Q96N87 628 aa9.34□□□□□ -0.91
CPNE3-206ENST00000523469 TANGO6Q9C0B7 1094 aa9.34□□□□□ -0.91
CPNE3-206ENST00000523469 TNKS2Q9H2K2 1166 aa9.34□□□□□ -0.91
CPNE3-206ENST00000523469 BSDC1Q9NW68 430 aaPredicted RBP9.34□□□□□ -0.91
CPNE3-206ENST00000523469 KCNH3Q9ULD8 1083 aa9.34□□□□□ -0.91
CPNE3-206ENST00000523469 SNX11Q9Y5W9 270 aa9.34□□□□□ -0.91
CPNE3-206ENST00000523469 MRVI1Q9Y6F6 885 aa9.34□□□□□ -0.91
CPNE3-206ENST00000523469 TMEM265A0A087WTH1 108 aa9.33□□□□□ -0.92
CPNE3-206ENST00000523469 TNNI3KQ59H18 835 aa9.33□□□□□ -0.92
CPNE3-206ENST00000523469 NBPF12Q5TAG4 269 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms