RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.18□□□□□ -1.42
SDCBP-207ENST00000520168 MIGA2Q7L4E1 593 aa6.18□□□□□ -1.42
SDCBP-207ENST00000520168 SCUBE3Q8IX30 993 aa6.18□□□□□ -1.42
SDCBP-207ENST00000520168 SCYL3Q8IZE3 742 aa6.18□□□□□ -1.42
SDCBP-207ENST00000520168 PROCA1Q8NCQ7 364 aaPredicted RBP6.18□□□□□ -1.42
SDCBP-207ENST00000520168 FAM161BQ96MY7 647 aa6.18□□□□□ -1.42
SDCBP-207ENST00000520168 TBC1D2Q9BYX2 928 aa6.18□□□□□ -1.42
SDCBP-207ENST00000520168 SEMA6BQ9H3T3 888 aa6.18□□□□□ -1.42
SDCBP-207ENST00000520168 AGTPBP1Q9UPW5 1226 aa6.18□□□□□ -1.42
SDCBP-207ENST00000520168 MROH5Q6ZUA9 1318 aa6.18□□□□□ -1.42
SDCBP-207ENST00000520168 NCOR1O75376 2440 aa6.17□□□□□ -1.42
SDCBP-207ENST00000520168 SNAP23O00161 211 aa6.17□□□□□ -1.42
SDCBP-207ENST00000520168 CACNB3P54284 484 aa6.17□□□□□ -1.42
SDCBP-207ENST00000520168 RALBP1Q15311 655 aa6.17□□□□□ -1.42
SDCBP-207ENST00000520168 APOBEC3HQ6NTF7 200 aaKnown RBP6.17□□□□□ -1.42
SDCBP-207ENST00000520168 GADL1Q6ZQY3 521 aa6.17□□□□□ -1.42
SDCBP-207ENST00000520168 ANKRD13CQ8N6S4 541 aa6.17□□□□□ -1.42
SDCBP-207ENST00000520168 LINS1Q8NG48 757 aa6.17□□□□□ -1.42
SDCBP-207ENST00000520168 SOCS4Q8WXH5 440 aa6.17□□□□□ -1.42
SDCBP-207ENST00000520168 FAM84BQ96KN1 310 aaPredicted RBP6.17□□□□□ -1.42
SDCBP-207ENST00000520168 CHMP3Q9Y3E7 222 aa6.17□□□□□ -1.42
SDCBP-207ENST00000520168 AFG3L2Q9Y4W6 797 aa6.17□□□□□ -1.42
SDCBP-207ENST00000520168 KIF16BQ96L93 1317 aa6.17□□□□□ -1.42
SDCBP-207ENST00000520168 SYNGAP1Q96PV0 1343 aa6.17□□□□□ -1.42
SDCBP-207ENST00000520168 ELL2O00472 640 aaPredicted RBP6.16□□□□□ -1.42
SDCBP-207ENST00000520168 MSCO60682 206 aa6.16□□□□□ -1.42
SDCBP-207ENST00000520168 CTNND1O60716 968 aaKnown RBP6.16□□□□□ -1.42
SDCBP-207ENST00000520168 PTPRAP18433 802 aa6.16□□□□□ -1.42
SDCBP-207ENST00000520168 GYG1P46976 350 aa6.16□□□□□ -1.42
SDCBP-207ENST00000520168 WDR43Q15061 677 aaKnown RBP eCLIP6.16□□□□□ -1.42
SDCBP-207ENST00000520168 LRRC26Q2I0M4 334 aa6.16□□□□□ -1.42
SDCBP-207ENST00000520168 PLA2G2CQ5R387 149 aa6.16□□□□□ -1.42
SDCBP-207ENST00000520168 CCDC146Q8IYE0 955 aa6.16□□□□□ -1.42
SDCBP-207ENST00000520168 ATXN2LQ8WWM7 1075 aaKnown RBP6.16□□□□□ -1.42
SDCBP-207ENST00000520168 DNAAF4Q8WXU2 420 aa6.16□□□□□ -1.42
SDCBP-207ENST00000520168 MYLIPQ8WY64 445 aa6.16□□□□□ -1.42
SDCBP-207ENST00000520168 NUDT12Q9BQG2 462 aa6.16□□□□□ -1.42
SDCBP-207ENST00000520168 C1QTNF1Q9BXJ1 281 aa6.16□□□□□ -1.42
SDCBP-207ENST00000520168 HCN4Q9Y3Q4 1203 aa6.16□□□□□ -1.42
SDCBP-207ENST00000520168 LRRFIP2Q9Y608 721 aaKnown RBP6.16□□□□□ -1.42
SDCBP-207ENST00000520168 ZHX2Q9Y6X8 837 aa6.16□□□□□ -1.42
SDCBP-207ENST00000520168 TRANK1O15050 2925 aa6.15□□□□□ -1.42
SDCBP-207ENST00000520168 PHF20L1A8MW92 1017 aa6.15□□□□□ -1.42
SDCBP-207ENST00000520168 PLIN1O60240 522 aa6.15□□□□□ -1.42
SDCBP-207ENST00000520168 ZKSCAN1P17029 563 aaPredicted RBP6.15□□□□□ -1.42
SDCBP-207ENST00000520168 FOXO4P98177 505 aa6.15□□□□□ -1.42
SDCBP-207ENST00000520168 MAP3K12Q12852 859 aa6.15□□□□□ -1.42
SDCBP-207ENST00000520168 CHAF1AQ13111 956 aaPredicted RBP6.15□□□□□ -1.42
SDCBP-207ENST00000520168 FKBP5Q13451 457 aaPredicted RBP6.15□□□□□ -1.42
SDCBP-207ENST00000520168 PDE3AQ14432 1141 aa6.15□□□□□ -1.42
SDCBP-207ENST00000520168 FBXO33Q7Z6M2 555 aa6.15□□□□□ -1.42
SDCBP-207ENST00000520168 C8orf58Q8NAV2 365 aa6.15□□□□□ -1.42
SDCBP-207ENST00000520168 IL27Q8NEV9 243 aa6.15□□□□□ -1.42
SDCBP-207ENST00000520168 WDR66Q8TBY9 1149 aa6.15□□□□□ -1.42
SDCBP-207ENST00000520168 TRIB2Q92519 343 aa6.15□□□□□ -1.42
SDCBP-207ENST00000520168 SPSB2Q99619 263 aa6.15□□□□□ -1.42
SDCBP-207ENST00000520168 AAASQ9NRG9 546 aa6.15□□□□□ -1.42
SDCBP-207ENST00000520168 GJD2Q9UKL4 321 aa6.15□□□□□ -1.42
SDCBP-207ENST00000520168 ATRNL1Q5VV63 1379 aa6.15□□□□□ -1.43
SDCBP-207ENST00000520168 CHD9Q3L8U1 2897 aa6.15□□□□□ -1.43
SDCBP-207ENST00000520168 TRIM75PA6NK02 468 aa6.14□□□□□ -1.43
SDCBP-207ENST00000520168 ENTPD3O75355 529 aa6.14□□□□□ -1.43
SDCBP-207ENST00000520168 MAPK4P31152 587 aa6.14□□□□□ -1.43
SDCBP-207ENST00000520168 RPIAP49247 311 aa6.14□□□□□ -1.43
SDCBP-207ENST00000520168 MAP3K10Q02779 954 aa6.14□□□□□ -1.43
SDCBP-207ENST00000520168 TCP10Q12799 353 aa6.14□□□□□ -1.43
SDCBP-207ENST00000520168 FLIIQ13045 1269 aa6.14□□□□□ -1.43
SDCBP-207ENST00000520168 LMBR1LQ6UX01 489 aa6.14□□□□□ -1.43
SDCBP-207ENST00000520168 GTF3C2Q8WUA4 911 aaPredicted RBP6.14□□□□□ -1.43
SDCBP-207ENST00000520168 TTYH1Q9H313 450 aaPredicted RBP6.14□□□□□ -1.43
SDCBP-207ENST00000520168 THEGQ9P2T0 379 aa6.14□□□□□ -1.43
SDCBP-207ENST00000520168 MORF4L1Q9UBU8 362 aa6.14□□□□□ -1.43
SDCBP-207ENST00000520168 ZNF236Q9UL36 1845 aa6.13□□□□□ -1.43
SDCBP-207ENST00000520168 PLXNA1Q9UIW2 1896 aa6.13□□□□□ -1.43
SDCBP-207ENST00000520168 CHD7Q9P2D1 2997 aa6.13□□□□□ -1.43
SDCBP-207ENST00000520168 DNM1LO00429 736 aa6.13□□□□□ -1.43
SDCBP-207ENST00000520168 ST8SIA5O15466 376 aa6.13□□□□□ -1.43
SDCBP-207ENST00000520168 CYP2B6P20813 491 aa6.13□□□□□ -1.43
SDCBP-207ENST00000520168 RGS2P41220 211 aa6.13□□□□□ -1.43
SDCBP-207ENST00000520168 CACNB2Q08289 660 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-207ENST00000520168 TRIM32Q13049 653 aa6.13□□□□□ -1.43
SDCBP-207ENST00000520168 SHHQ15465 462 aa6.13□□□□□ -1.43
SDCBP-207ENST00000520168 GRIK5Q16478 980 aa6.13□□□□□ -1.43
SDCBP-207ENST00000520168 PUS10Q3MIT2 529 aaKnown RBP6.13□□□□□ -1.43
SDCBP-207ENST00000520168 AKNAD1Q5T1N1 836 aa6.13□□□□□ -1.43
SDCBP-207ENST00000520168 CDC42EP5Q6NZY7 148 aa6.13□□□□□ -1.43
SDCBP-207ENST00000520168 TREML4Q6UXN2 200 aa6.13□□□□□ -1.43
SDCBP-207ENST00000520168 CRIPAKQ8N1N5 446 aa6.13□□□□□ -1.43
SDCBP-207ENST00000520168 LPAR1Q92633 364 aa6.13□□□□□ -1.43
SDCBP-207ENST00000520168 APBA2Q99767 749 aa6.13□□□□□ -1.43
SDCBP-207ENST00000520168 IDI2Q9BXS1 227 aa6.13□□□□□ -1.43
SDCBP-207ENST00000520168 SENP6Q9GZR1 1112 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-207ENST00000520168 OSBPL5Q9H0X9 879 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-207ENST00000520168 PKD2L1Q9P0L9 805 aa6.13□□□□□ -1.43
SDCBP-207ENST00000520168 DAGLAQ9Y4D2 1042 aa6.13□□□□□ -1.43
SDCBP-207ENST00000520168 MYBBP1AQ9BQG0 1328 aaKnown RBP6.13□□□□□ -1.43
SDCBP-207ENST00000520168 FOCADQ5VW36 1801 aa6.13□□□□□ -1.43
SDCBP-207ENST00000520168 GRM8O00222 908 aa6.12□□□□□ -1.43
SDCBP-207ENST00000520168 GLRX3O76003 335 aaKnown RBP6.12□□□□□ -1.43
SDCBP-207ENST00000520168 PDE8BO95263 885 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms