RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 TGFB1P01137 390 aa9.82□□□□□ -0.84
PTPN12-213ENST00000519553 RAG1P15918 1043 aa9.82□□□□□ -0.84
PTPN12-213ENST00000519553 CYP27C1Q4G0S4 372 aa9.82□□□□□ -0.84
PTPN12-213ENST00000519553 RUFY4Q6ZNE9 571 aa9.82□□□□□ -0.84
PTPN12-213ENST00000519553 PHACTR4Q8IZ21 702 aa9.82□□□□□ -0.84
PTPN12-213ENST00000519553 TAB3Q8N5C8 712 aaPredicted RBP9.82□□□□□ -0.84
PTPN12-213ENST00000519553 BAHD1Q8TBE0 780 aaPredicted RBP9.82□□□□□ -0.84
PTPN12-213ENST00000519553 CCDC74BQ96LY2 380 aa9.82□□□□□ -0.84
PTPN12-213ENST00000519553 KIF2CQ99661 725 aa9.82□□□□□ -0.84
PTPN12-213ENST00000519553 COL17A1Q9UMD9 1497 aaPredicted RBP9.82□□□□□ -0.84
PTPN12-213ENST00000519553 DUSP27Q5VZP5 1158 aa9.81□□□□□ -0.84
PTPN12-213ENST00000519553 CDH24Q86UP0 819 aa9.81□□□□□ -0.84
PTPN12-213ENST00000519553 FAM169BQ8N8A8 192 aa9.81□□□□□ -0.84
PTPN12-213ENST00000519553 TM9SF2Q99805 663 aa9.81□□□□□ -0.84
PTPN12-213ENST00000519553 CPLX3Q8WVH0 158 aa9.8□□□□□ -0.84
PTPN12-213ENST00000519553 SLC9A7Q96T83 725 aa9.8□□□□□ -0.84
PTPN12-213ENST00000519553 PIM2Q9P1W9 311 aa9.8□□□□□ -0.84
PTPN12-213ENST00000519553 CEP131Q9UPN4 1083 aa9.8□□□□□ -0.84
PTPN12-213ENST00000519553 MAPK8IP1Q9UQF2 711 aa9.8□□□□□ -0.84
PTPN12-213ENST00000519553 OR6P1Q8NGX9 317 aa9.79□□□□□ -0.84
PTPN12-213ENST00000519553 CRBNQ96SW2 442 aa9.79□□□□□ -0.84
PTPN12-213ENST00000519553 PRDM5Q9NQX1 630 aaPredicted RBP9.79□□□□□ -0.84
PTPN12-213ENST00000519553 LEMD3Q9Y2U8 911 aa9.79□□□□□ -0.84
PTPN12-213ENST00000519553 IGF2BP3O00425 579 aaKnown RBP eCLIP9.78□□□□□ -0.84
PTPN12-213ENST00000519553 SSBP05455 408 aaKnown RBP eCLIP9.78□□□□□ -0.84
PTPN12-213ENST00000519553 GUCY2CP25092 1073 aa9.78□□□□□ -0.84
PTPN12-213ENST00000519553 HOXA10P31260 410 aaPredicted RBP9.78□□□□□ -0.84
PTPN12-213ENST00000519553 ZYXQ15942 572 aaKnown RBP9.78□□□□□ -0.84
PTPN12-213ENST00000519553 INTS3Q68E01 1043 aaKnown RBP9.78□□□□□ -0.84
PTPN12-213ENST00000519553 FAM181AQ8N9Y4 354 aa9.78□□□□□ -0.84
PTPN12-213ENST00000519553 ANAPC16Q96DE5 110 aa9.78□□□□□ -0.84
PTPN12-213ENST00000519553 TPX2Q9ULW0 747 aaKnown RBP9.78□□□□□ -0.84
PTPN12-213ENST00000519553 RNF112Q9ULX5 631 aa9.78□□□□□ -0.84
PTPN12-213ENST00000519553 MRVI1Q9Y6F6 885 aa9.78□□□□□ -0.84
PTPN12-213ENST00000519553 FOSL1P15407 271 aa9.77□□□□□ -0.85
PTPN12-213ENST00000519553 CCNFP41002 786 aa9.77□□□□□ -0.85
PTPN12-213ENST00000519553 ETV3P41162 512 aa9.77□□□□□ -0.85
PTPN12-213ENST00000519553 OXCT1P55809 520 aa9.77□□□□□ -0.85
PTPN12-213ENST00000519553 ZNF746Q6NUN9 644 aaPredicted RBP9.77□□□□□ -0.85
PTPN12-213ENST00000519553 C22orf34Q6ZV56 151 aa9.77□□□□□ -0.85
PTPN12-213ENST00000519553 C19orf47Q8N9M1 422 aaKnown RBP9.77□□□□□ -0.85
PTPN12-213ENST00000519553 ZNF408Q9H9D4 720 aa9.77□□□□□ -0.85
PTPN12-213ENST00000519553 LRRC4CQ9HCJ2 640 aa9.77□□□□□ -0.85
PTPN12-213ENST00000519553 GTF2IRD1Q9UHL9 959 aa9.77□□□□□ -0.85
PTPN12-213ENST00000519553 PRR33A8MZF0 331 aa9.76□□□□□ -0.85
PTPN12-213ENST00000519553 CYP26A1O43174 497 aa9.76□□□□□ -0.85
PTPN12-213ENST00000519553 ZNF865P0CJ78 1059 aaPredicted RBP9.76□□□□□ -0.85
PTPN12-213ENST00000519553 GBP1P32455 592 aa9.76□□□□□ -0.85
PTPN12-213ENST00000519553 ETFBP38117 255 aa9.76□□□□□ -0.85
PTPN12-213ENST00000519553 TMEM192Q8IY95 271 aa9.76□□□□□ -0.85
PTPN12-213ENST00000519553 VWCEQ96DN2 955 aa9.76□□□□□ -0.85
PTPN12-213ENST00000519553 KREMEN1Q96MU8 473 aa9.76□□□□□ -0.85
PTPN12-213ENST00000519553 TANGO6Q9C0B7 1094 aa9.76□□□□□ -0.85
PTPN12-213ENST00000519553 MSMPQ1L6U9 139 aa9.75□□□□□ -0.85
PTPN12-213ENST00000519553 SFRP5Q5T4F7 317 aa9.75□□□□□ -0.85
PTPN12-213ENST00000519553 RNF141Q8WVD5 230 aa9.75□□□□□ -0.85
PTPN12-213ENST00000519553 MKNK2Q9HBH9 465 aa9.75□□□□□ -0.85
PTPN12-213ENST00000519553 ZC3H7BQ9UGR2 993 aaKnown RBP9.75□□□□□ -0.85
PTPN12-213ENST00000519553 A0A1W2PQH9 124 aa9.74□□□□□ -0.85
PTPN12-213ENST00000519553 FAM86C2PA6NEL3 165 aa9.74□□□□□ -0.85
PTPN12-213ENST00000519553 CASP7P55210 303 aa9.74□□□□□ -0.85
PTPN12-213ENST00000519553 UNC5AQ6ZN44 842 aa9.74□□□□□ -0.85
PTPN12-213ENST00000519553 TTC6Q86TZ1 520 aa9.74□□□□□ -0.85
PTPN12-213ENST00000519553 COX4I2Q96KJ9 171 aa9.74□□□□□ -0.85
PTPN12-213ENST00000519553 SLC6A18Q96N87 628 aa9.74□□□□□ -0.85
PTPN12-213ENST00000519553 MED26O95402 600 aa9.73□□□□□ -0.85
PTPN12-213ENST00000519553 CEACAM5P06731 702 aa9.73□□□□□ -0.85
PTPN12-213ENST00000519553 CYP7A1P22680 504 aa9.73□□□□□ -0.85
PTPN12-213ENST00000519553 PLD6Q8N2A8 252 aaKnown RBP9.73□□□□□ -0.85
PTPN12-213ENST00000519553 Q96M66 194 aa9.73□□□□□ -0.85
PTPN12-213ENST00000519553 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.73□□□□□ -0.85
PTPN12-213ENST00000519553 PRKAG3Q9UGI9 489 aa9.73□□□□□ -0.85
PTPN12-213ENST00000519553 PLAGL2Q9UPG8 496 aa9.73□□□□□ -0.85
PTPN12-213ENST00000519553 CAPN6Q9Y6Q1 641 aa9.73□□□□□ -0.85
PTPN12-213ENST00000519553 LTBP3Q9NS15 1303 aa9.73□□□□□ -0.85
PTPN12-213ENST00000519553 SMAD7O15105 426 aaKnown RBP9.72□□□□□ -0.85
PTPN12-213ENST00000519553 CD97P48960 835 aa9.72□□□□□ -0.85
PTPN12-213ENST00000519553 NKPD1Q17RQ9 610 aa9.72□□□□□ -0.85
PTPN12-213ENST00000519553 SPACA3Q8IXA5 215 aa9.72□□□□□ -0.85
PTPN12-213ENST00000519553 MFSD4AQ8N468 514 aa9.72□□□□□ -0.85
PTPN12-213ENST00000519553 SREK1Q8WXA9 508 aaKnown RBP9.72□□□□□ -0.85
PTPN12-213ENST00000519553 ASPNQ9BXN1 380 aa9.72□□□□□ -0.85
PTPN12-213ENST00000519553 TNKS2Q9H2K2 1166 aa9.72□□□□□ -0.85
PTPN12-213ENST00000519553 CLEC3AO75596 197 aa9.71□□□□□ -0.86
PTPN12-213ENST00000519553 CBX7O95931 251 aa9.71□□□□□ -0.86
PTPN12-213ENST00000519553 ITIH2P19823 946 aa9.71□□□□□ -0.86
PTPN12-213ENST00000519553 KIR3DL1P43629 444 aa9.71□□□□□ -0.86
PTPN12-213ENST00000519553 SF3A1Q15459 793 aaKnown RBP9.71□□□□□ -0.86
PTPN12-213ENST00000519553 NBPF12Q5TAG4 269 aaPredicted RBP9.71□□□□□ -0.86
PTPN12-213ENST00000519553 PPFIBP1Q86W92 1011 aa9.71□□□□□ -0.86
PTPN12-213ENST00000519553 FBXL18Q96ME1 805 aa9.71□□□□□ -0.86
PTPN12-213ENST00000519553 SUCOQ9UBS9 1254 aaKnown RBP9.71□□□□□ -0.86
PTPN12-213ENST00000519553 GNAT3A8MTJ3 354 aa9.7□□□□□ -0.86
PTPN12-213ENST00000519553 COBLO75128 1261 aa9.7□□□□□ -0.86
PTPN12-213ENST00000519553 LRRN2O75325 713 aa9.7□□□□□ -0.86
PTPN12-213ENST00000519553 ATP2B1P20020 1258 aa9.7□□□□□ -0.86
PTPN12-213ENST00000519553 GRIK1P39086 918 aa9.7□□□□□ -0.86
PTPN12-213ENST00000519553 TNK2Q07912 1038 aa9.7□□□□□ -0.86
PTPN12-213ENST00000519553 TNNI3KQ59H18 835 aa9.7□□□□□ -0.86
PTPN12-213ENST00000519553 NETO1Q8TDF5 533 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms