RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 NNTQ13423 1086 aa15.23■□□□□ 0.03
PABPC1-208ENST00000519004 ZNF827Q17R98 1081 aa15.23■□□□□ 0.03
PABPC1-208ENST00000519004 ANKRD20A8PQ5CZ79 823 aa15.23■□□□□ 0.03
PABPC1-208ENST00000519004 KCTD16Q68DU8 428 aa15.23■□□□□ 0.03
PABPC1-208ENST00000519004 BZW1Q7L1Q6 419 aaKnown RBP15.23■□□□□ 0.03
PABPC1-208ENST00000519004 MLKLQ8NB16 471 aa15.23■□□□□ 0.03
PABPC1-208ENST00000519004 HINFPQ9BQA5 517 aa15.23■□□□□ 0.03
PABPC1-208ENST00000519004 GUCA1BQ9UMX6 200 aa15.23■□□□□ 0.03
PABPC1-208ENST00000519004 LRRC37A3O60309 1634 aa15.23■□□□□ 0.03
PABPC1-208ENST00000519004 ZNF609O15014 1411 aa15.23■□□□□ 0.03
PABPC1-208ENST00000519004 PPP6R2O75170 966 aa15.23■□□□□ 0.03
PABPC1-208ENST00000519004 C2orf54Q08AI8 447 aa15.23■□□□□ 0.03
PABPC1-208ENST00000519004 EBF2Q9HAK2 575 aa15.23■□□□□ 0.03
PABPC1-208ENST00000519004 ADD3Q9UEY8 706 aaKnown RBP15.23■□□□□ 0.03
PABPC1-208ENST00000519004 CHGBP05060 677 aa15.22■□□□□ 0.03
PABPC1-208ENST00000519004 PDE6BP35913 854 aa15.22■□□□□ 0.03
PABPC1-208ENST00000519004 APBA1Q02410 837 aa15.22■□□□□ 0.03
PABPC1-208ENST00000519004 XRCC4Q13426 336 aa15.22■□□□□ 0.03
PABPC1-208ENST00000519004 PTPAQ15257 358 aa15.22■□□□□ 0.03
PABPC1-208ENST00000519004 TAF7Q15545 349 aaPredicted RBP15.22■□□□□ 0.03
PABPC1-208ENST00000519004 MIS18BP1Q6P0N0 1132 aa15.22■□□□□ 0.03
PABPC1-208ENST00000519004 TRPC6Q9Y210 931 aa15.22■□□□□ 0.03
PABPC1-208ENST00000519004 HSF2BPO75031 334 aa15.22■□□□□ 0.03
PABPC1-208ENST00000519004 SMNDC1O75940 238 aaKnown RBP eCLIP15.22■□□□□ 0.038e-8■■■■■ 27.3
PABPC1-208ENST00000519004 MORC3Q14149 939 aa15.22■□□□□ 0.03
PABPC1-208ENST00000519004 EZH2Q15910 746 aaKnown RBP15.22■□□□□ 0.03
PABPC1-208ENST00000519004 CAPRIN2Q6IMN6 1127 aaKnown RBP15.22■□□□□ 0.03
PABPC1-208ENST00000519004 WAPLQ7Z5K2 1190 aa15.22■□□□□ 0.03
PABPC1-208ENST00000519004 NSMCE1Q8WV22 266 aa15.22■□□□□ 0.03
PABPC1-208ENST00000519004 ZIM3Q96PE6 472 aa15.22■□□□□ 0.03
PABPC1-208ENST00000519004 RUFY1Q96T51 708 aa15.22■□□□□ 0.03
PABPC1-208ENST00000519004 ABHD10Q9NUJ1 306 aa15.22■□□□□ 0.03
PABPC1-208ENST00000519004 DACH1Q9UI36 760 aa15.22■□□□□ 0.03
PABPC1-208ENST00000519004 RIPOR2Q9Y4F9 1068 aa15.22■□□□□ 0.03
PABPC1-208ENST00000519004 SETD1BQ9UPS6 1966 aaKnown RBP15.21■□□□□ 0.03
PABPC1-208ENST00000519004 PRPHP41219 470 aa15.21■□□□□ 0.03
PABPC1-208ENST00000519004 TBC1D25Q3MII6 688 aa15.21■□□□□ 0.03
PABPC1-208ENST00000519004 FILIP1LQ4L180 1135 aa15.21■□□□□ 0.03
PABPC1-208ENST00000519004 NT5DC1Q5TFE4 455 aa15.21■□□□□ 0.03
PABPC1-208ENST00000519004 HDAC7Q8WUI4 952 aa15.21■□□□□ 0.03
PABPC1-208ENST00000519004 CYFIP2Q96F07 1278 aa15.21■□□□□ 0.03
PABPC1-208ENST00000519004 STAMBPL1Q96FJ0 436 aa15.21■□□□□ 0.03
PABPC1-208ENST00000519004 SRRM3A6NNA2 597 aaPredicted RBP15.21■□□□□ 0.02
PABPC1-208ENST00000519004 ATP6V1G2O95670 118 aa15.21■□□□□ 0.02
PABPC1-208ENST00000519004 SARSP49591 514 aaKnown RBP15.21■□□□□ 0.02
PABPC1-208ENST00000519004 SPECC1Q5M775 1068 aa15.21■□□□□ 0.02
PABPC1-208ENST00000519004 CYP26C1Q6V0L0 522 aa15.21■□□□□ 0.02
PABPC1-208ENST00000519004 HOMEZQ8IX15 550 aa15.21■□□□□ 0.02
PABPC1-208ENST00000519004 ELOA2Q8IYF1 753 aaPredicted RBP15.21■□□□□ 0.02
PABPC1-208ENST00000519004 C3orf20Q8ND61 904 aa15.21■□□□□ 0.02
PABPC1-208ENST00000519004 JAKMIP2Q96AA8 810 aa15.21■□□□□ 0.02
PABPC1-208ENST00000519004 NUP58Q9BVL2 599 aa15.21■□□□□ 0.02
PABPC1-208ENST00000519004 KCNH3Q9ULD8 1083 aa15.21■□□□□ 0.02
PABPC1-208ENST00000519004 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.21■□□□□ 0.02
PABPC1-208ENST00000519004 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.21■□□□□ 0.02
PABPC1-208ENST00000519004 KIDINS220Q9ULH0 1771 aa15.2■□□□□ 0.02
PABPC1-208ENST00000519004 MYH8P13535 1937 aa15.2■□□□□ 0.02
PABPC1-208ENST00000519004 MAP3K19Q56UN5 1328 aa15.2■□□□□ 0.02
PABPC1-208ENST00000519004 RNF225M0QZC1 329 aaPredicted RBP15.2■□□□□ 0.02
PABPC1-208ENST00000519004 ZNF185O15231 689 aa15.2■□□□□ 0.02
PABPC1-208ENST00000519004 KRT14P02533 472 aa15.2■□□□□ 0.02
PABPC1-208ENST00000519004 MDH1P40925 334 aaKnown RBP15.2■□□□□ 0.02
PABPC1-208ENST00000519004 SCTRP47872 440 aa15.2■□□□□ 0.02
PABPC1-208ENST00000519004 PLCD1P51178 756 aa15.2■□□□□ 0.02
PABPC1-208ENST00000519004 NOD2Q9HC29 1040 aa15.2■□□□□ 0.02
PABPC1-208ENST00000519004 DMGDHQ9UI17 866 aaKnown RBP15.2■□□□□ 0.02
PABPC1-208ENST00000519004 ITIH6Q6UXX5 1313 aa15.2■□□□□ 0.02
PABPC1-208ENST00000519004 NR1D1P20393 614 aa15.19■□□□□ 0.02
PABPC1-208ENST00000519004 EPHB4P54760 987 aa15.19■□□□□ 0.02
PABPC1-208ENST00000519004 MYO1EQ12965 1108 aa15.19■□□□□ 0.02
PABPC1-208ENST00000519004 PSMD2Q13200 908 aa15.19■□□□□ 0.02
PABPC1-208ENST00000519004 MED1Q15648 1581 aaPredicted RBP15.19■□□□□ 0.02
PABPC1-208ENST00000519004 PDCD2Q16342 344 aaPredicted RBP15.19■□□□□ 0.02
PABPC1-208ENST00000519004 THEMIS2Q5TEJ8 643 aa15.19■□□□□ 0.02
PABPC1-208ENST00000519004 HDGFL1Q5TGJ6 251 aa15.19■□□□□ 0.02
PABPC1-208ENST00000519004 DRAXINQ8NBI3 349 aaPredicted RBP15.19■□□□□ 0.02
PABPC1-208ENST00000519004 CAGE1Q8TC20 777 aa15.19■□□□□ 0.02
PABPC1-208ENST00000519004 RUBCNQ92622 972 aa15.19■□□□□ 0.02
PABPC1-208ENST00000519004 POSTNQ15063 836 aa15.19■□□□□ 0.02
PABPC1-208ENST00000519004 LACTB2Q53H82 288 aaPredicted RBP15.19■□□□□ 0.02
PABPC1-208ENST00000519004 MMGT1Q8N4V1 131 aa15.19■□□□□ 0.02
PABPC1-208ENST00000519004 CAVIN3Q969G5 261 aa15.19■□□□□ 0.02
PABPC1-208ENST00000519004 AIDAQ96BJ3 306 aa15.19■□□□□ 0.02
PABPC1-208ENST00000519004 TBC1D31Q96DN5 1066 aa15.19■□□□□ 0.02
PABPC1-208ENST00000519004 ACSBG1Q96GR2 724 aa15.19■□□□□ 0.02
PABPC1-208ENST00000519004 MON2Q7Z3U7 1717 aa15.19■□□□□ 0.02
PABPC1-208ENST00000519004 PEAK1Q9H792 1746 aa15.19■□□□□ 0.02
PABPC1-208ENST00000519004 SPATA31D1Q6ZQQ2 1576 aa15.19■□□□□ 0.02
PABPC1-208ENST00000519004 E7EVH7 732 aa15.18■□□□□ 0.02
PABPC1-208ENST00000519004 BUB1BO60566 1050 aaPredicted RBP15.18■□□□□ 0.02
PABPC1-208ENST00000519004 ELF3P78545 371 aaPredicted RBP15.18■□□□□ 0.02
PABPC1-208ENST00000519004 EMBQ6PCB8 327 aa15.18■□□□□ 0.02
PABPC1-208ENST00000519004 CHST3Q7LGC8 479 aa15.18■□□□□ 0.02
PABPC1-208ENST00000519004 TCP11Q8WWU5 503 aa15.18■□□□□ 0.02
PABPC1-208ENST00000519004 CUL5Q93034 780 aa15.18■□□□□ 0.02
PABPC1-208ENST00000519004 SPAG5Q96R06 1193 aa15.18■□□□□ 0.02
PABPC1-208ENST00000519004 MAP3K14Q99558 947 aa15.18■□□□□ 0.02
PABPC1-208ENST00000519004 HAUS4Q9H6D7 363 aa15.18■□□□□ 0.02
PABPC1-208ENST00000519004 C15orf41Q9Y2V0 281 aa15.18■□□□□ 0.02
PABPC1-208ENST00000519004 MYO5BQ9ULV0 1848 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms