RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	ZP2	Q05996	745 aa		5.29	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	BNIP3	Q12983	259 aa		5.29	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	NKG7	Q16617	165 aa		5.29	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	ZNF574	Q6ZN55	896 aa	Predicted RBP	5.29	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	UBE3D	Q7Z6J8	389 aa		5.29	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	NT5DC4	Q86YG4	428 aa		5.29	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	FAM13C	Q8NE31	585 aa		5.29	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	TMEM40	Q8WWA1	233 aa		5.29	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	UBXN4	Q92575	508 aa		5.29	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	SYTL4	Q96C24	671 aa	Predicted RBP	5.29	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	FAM161B	Q96MY7	647 aa		5.29	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	ASPN	Q9BXN1	380 aa		5.29	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	GOLGA2P5	Q9HBQ8	144 aa		5.29	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	KCNQ5	Q9NR82	932 aa		5.29	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	CEP131	Q9UPN4	1083 aa		5.29	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	TLR6	Q9Y2C9	796 aa		5.29	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	CAPN6	Q9Y6Q1	641 aa		5.29	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	FAM221A	A4D161	298 aa		5.28	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	PF4	P02776	101 aa		5.28	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	RNF4	P78317	190 aa		5.28	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	RAD51AP2	Q09MP3	1159 aa		5.28	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	FAM196A	Q6ZSG2	479 aa		5.28	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	REC114	Q7Z4M0	266 aa		5.28	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	SLC43A3	Q8NBI5	491 aa		5.28	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	RNF141	Q8WVD5	230 aa		5.28	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	MBNL3	Q9NUK0	354 aa	Known RBP	5.28	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	GPATCH2	Q9NW75	528 aa		5.28	□□□□□ -1.56
CALCOCO2-223	ENST00000514267	F13A1	P00488	732 aa		5.27	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	RNASE1	P07998	156 aa	Known RBP	5.27	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	RAC2	P15153	192 aa		5.27	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	LRRFIP1	Q32MZ4	808 aa	Known RBP	5.27	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	BNC2	Q6ZN30	1099 aa	Predicted RBP	5.27	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	WFDC3	Q8IUB2	231 aa		5.27	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	POU5F2	Q8N7G0	328 aa		5.27	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	GOLM1	Q8NBJ4	401 aa		5.27	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	ACSF2	Q96CM8	615 aa	Predicted RBP	5.27	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	CCSER2	Q9H7U1	834 aa		5.27	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	RNF19A	Q9NV58	838 aa		5.27	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	PAPLN	O95428	1278 aa		5.26	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	CCNF	P41002	786 aa		5.26	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	TNNI2	P48788	182 aa		5.26	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	C9orf131	Q5VYM1	1079 aa		5.26	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	LRRN4CL	Q8ND94	238 aa		5.26	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	DNAJB8	Q8NHS0	232 aa		5.26	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	CCDC74B	Q96LY2	380 aa		5.26	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	HSPA12B	Q96MM6	686 aa		5.26	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	GPR62	Q9BZJ7	368 aa		5.26	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	ASCC2	Q9H1I8	757 aa	Predicted RBP	5.26	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	SEMA3G	Q9NS98	782 aa		5.26	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	KBTBD4	Q9NVX7	518 aa		5.26	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	GGT7	Q9UJ14	662 aa		5.26	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	ST14	Q9Y5Y6	855 aa		5.26	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	HTR3B	O95264	441 aa		5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	CBX7	O95931	251 aa		5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	IMPDH2	P12268	514 aa		5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	CANX	P27824	592 aa	Known RBP	5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	EIF4A3	P38919	411 aa	Known RBP	5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	GDNF	P39905	211 aa		5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	CDK8	P49336	464 aa		5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	GNL2	Q13823	731 aa	Known RBP	5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	PKN1	Q16512	942 aa		5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	CDKAL1	Q5VV42	579 aa		5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	ZSWIM9	Q86XI8	627 aa		5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	REXO1	Q8N1G1	1221 aa	Known RBP	5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	ENOX1	Q8TC92	643 aa	Known RBP	5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	XAGE3	Q8WTP9	111 aa		5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	FAM168A	Q92567	244 aa		5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	DHX38	Q92620	1227 aa	Known RBP	5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	ARMC5	Q96C12	935 aa		5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	ALPK1	Q96QP1	1244 aa		5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	TINF2	Q9BSI4	451 aa		5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	GMIP	Q9P107	970 aa		5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267		U3KQE9	123 aa		5.25	□□□□□ -1.57
CALCOCO2-223	ENST00000514267		H3BS24	57 aa		5.24	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	ATE1	O95260	518 aa		5.24	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	ENDOU	P21128	410 aa	Known RBP	5.24	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	ZNF165	P49910	485 aa		5.24	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	RBM10	P98175	930 aa	Known RBP	5.24	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	KCNMB1	Q16558	191 aa		5.24	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	PHACTR4	Q8IZ21	702 aa		5.24	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	DPH2	Q9BQC3	489 aa	Predicted RBP	5.24	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	CARS2	Q9HA77	564 aa	Known RBP	5.24	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	REV1	Q9UBZ9	1251 aa		5.24	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	MINDY4B	A8MYZ0	360 aa		5.23	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	GREM1	O60565	184 aa		5.23	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	FARP2	O94887	1054 aa	Predicted RBP	5.23	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	TNK2	Q07912	1038 aa		5.23	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	CDH24	Q86UP0	819 aa		5.23	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	ZNF654	Q8IZM8	581 aa		5.23	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	UBE2F	Q969M7	185 aa		5.23	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	SPATA32	Q96LK8	384 aa		5.23	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	GML	Q99445	158 aa		5.23	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	SLC38A3	Q99624	504 aa		5.23	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	NT5C1A	Q9BXI3	368 aa		5.23	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	EHMT1	Q9H9B1	1298 aa		5.23	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	ATP13A1	Q9HD20	1204 aa		5.23	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	ADAMTS6	Q9UKP5	1117 aa		5.23	□□□□□ -1.57
CALCOCO2-223	ENST00000514267	CTNND2	Q9UQB3	1225 aa		5.23	□□□□□ -1.57

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