RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 STAG1Q8WVM7 1258 aa19.47■□□□□ 0.71
HMGCL-209ENST00000513148 AS3MTQ9HBK9 375 aa19.47■□□□□ 0.71
HMGCL-209ENST00000513148 GINM1Q9NU53 330 aa19.47■□□□□ 0.71
HMGCL-209ENST00000513148 GREB1LQ9C091 1923 aaPredicted RBP19.47■□□□□ 0.71
HMGCL-209ENST00000513148 TSPY2A6NKD2 308 aa19.47■□□□□ 0.71
HMGCL-209ENST00000513148 MAP2K2P36507 400 aa19.47■□□□□ 0.71
HMGCL-209ENST00000513148 GTF2A2P52657 109 aa19.47■□□□□ 0.71
HMGCL-209ENST00000513148 TFAP4Q01664 338 aa19.47■□□□□ 0.71
HMGCL-209ENST00000513148 SNAPC2Q13487 334 aa19.47■□□□□ 0.71
HMGCL-209ENST00000513148 HSP90AA2PQ14568 343 aaPredicted RBP19.47■□□□□ 0.71
HMGCL-209ENST00000513148 RNF41Q9H4P4 317 aaPredicted RBP19.47■□□□□ 0.71
HMGCL-209ENST00000513148 TAF6LQ9Y6J9 622 aa19.47■□□□□ 0.71
HMGCL-209ENST00000513148 CCL15-CCL14A0A0B4J2E2 113 aa19.46■□□□□ 0.71
HMGCL-209ENST00000513148 ATP2B2Q01814 1243 aa19.46■□□□□ 0.71
HMGCL-209ENST00000513148 ICA1Q05084 483 aa19.46■□□□□ 0.71
HMGCL-209ENST00000513148 DGKZQ13574 1117 aa19.46■□□□□ 0.71
HMGCL-209ENST00000513148 MTMR2Q13614 643 aa19.46■□□□□ 0.71
HMGCL-209ENST00000513148 ZYXQ15942 572 aaKnown RBP19.46■□□□□ 0.71
HMGCL-209ENST00000513148 CCL15Q16663 113 aa19.46■□□□□ 0.71
HMGCL-209ENST00000513148 MS4A4AQ96JQ5 239 aa19.46■□□□□ 0.71
HMGCL-209ENST00000513148 FEZ1Q99689 392 aa19.46■□□□□ 0.71
HMGCL-209ENST00000513148 MANSC4A6NHS7 340 aaPredicted RBP19.46■□□□□ 0.71
HMGCL-209ENST00000513148 ORC4O43929 436 aa19.46■□□□□ 0.71
HMGCL-209ENST00000513148 REC8O95072 547 aa19.46■□□□□ 0.71
HMGCL-209ENST00000513148 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.46■□□□□ 0.71
HMGCL-209ENST00000513148 KCNH4Q9UQ05 1017 aa19.46■□□□□ 0.71
HMGCL-209ENST00000513148 HSP90AA1P07900 732 aaKnown RBP19.45■□□□□ 0.7
HMGCL-209ENST00000513148 HMGCS2P54868 508 aa19.45■□□□□ 0.7
HMGCL-209ENST00000513148 SREBF2Q12772 1141 aa19.45■□□□□ 0.7
HMGCL-209ENST00000513148 NKX2-3Q8TAU0 364 aa19.45■□□□□ 0.7
HMGCL-209ENST00000513148 ACER1Q8TDN7 264 aa19.45■□□□□ 0.7
HMGCL-209ENST00000513148 FGRP09769 529 aa19.44■□□□□ 0.7
HMGCL-209ENST00000513148 BECN1Q14457 450 aa19.44■□□□□ 0.7
HMGCL-209ENST00000513148 BRI3BPQ8WY22 251 aa19.44■□□□□ 0.7
HMGCL-209ENST00000513148 WDR18Q9BV38 432 aa19.44■□□□□ 0.7
HMGCL-209ENST00000513148 TBC1D2Q9BYX2 928 aa19.44■□□□□ 0.7
HMGCL-209ENST00000513148 B4E1Z4 1266 aa19.44■□□□□ 0.7
HMGCL-209ENST00000513148 CXCL11O14625 94 aa19.44■□□□□ 0.7
HMGCL-209ENST00000513148 SLC27A2O14975 620 aa19.44■□□□□ 0.7
HMGCL-209ENST00000513148 CETPP11597 493 aa19.44■□□□□ 0.7
HMGCL-209ENST00000513148 CREB3L3Q68CJ9 461 aa19.44■□□□□ 0.7
HMGCL-209ENST00000513148 GADL1Q6ZQY3 521 aa19.44■□□□□ 0.7
HMGCL-209ENST00000513148 A0A0G2JLL6 359 aaPredicted RBP19.43■□□□□ 0.7
HMGCL-209ENST00000513148 USP17L10C9JJH3 530 aa19.43■□□□□ 0.7
HMGCL-209ENST00000513148 NMT2O60551 498 aa19.43■□□□□ 0.7
HMGCL-209ENST00000513148 PCP11498 1178 aaKnown RBP19.43■□□□□ 0.7
HMGCL-209ENST00000513148 NECTIN1Q15223 517 aa19.43■□□□□ 0.7
HMGCL-209ENST00000513148 PRRT2Q7Z6L0 340 aaPredicted RBP19.43■□□□□ 0.7
HMGCL-209ENST00000513148 CEP95Q96GE4 821 aa19.43■□□□□ 0.7
HMGCL-209ENST00000513148 KANSL2Q9H9L4 492 aa19.43■□□□□ 0.7
HMGCL-209ENST00000513148 MYH4Q9Y623 1939 aa19.43■□□□□ 0.7
HMGCL-209ENST00000513148 PLIN4Q96Q06 1357 aa19.42■□□□□ 0.7
HMGCL-209ENST00000513148 A0A1W2PRG0 241 aa19.42■□□□□ 0.7
HMGCL-209ENST00000513148 IGF2BP3O00425 579 aaKnown RBP eCLIP19.42■□□□□ 0.7
HMGCL-209ENST00000513148 KDM4AO75164 1064 aa19.42■□□□□ 0.7
HMGCL-209ENST00000513148 EEF2P13639 858 aaKnown RBP19.42■□□□□ 0.7
HMGCL-209ENST00000513148 BACE1P56817 501 aa19.42■□□□□ 0.7
HMGCL-209ENST00000513148 NEDD1Q8NHV4 660 aa19.42■□□□□ 0.7
HMGCL-209ENST00000513148 ESR2Q92731 530 aa19.42■□□□□ 0.7
HMGCL-209ENST00000513148 PTPN18Q99952 460 aa19.42■□□□□ 0.7
HMGCL-209ENST00000513148 ARHGEF10LQ9HCE6 1279 aa19.42■□□□□ 0.7
HMGCL-209ENST00000513148 LOC285556D6RIA3 1793 aa19.42■□□□□ 0.7
HMGCL-209ENST00000513148 FSD2A1L4K1 749 aa19.42■□□□□ 0.7
HMGCL-209ENST00000513148 E7EWF7 191 aa19.42■□□□□ 0.7
HMGCL-209ENST00000513148 STOX1Q6ZVD7 989 aa19.42■□□□□ 0.7
HMGCL-209ENST00000513148 RAD21O60216 631 aa19.41■□□□□ 0.7
HMGCL-209ENST00000513148 TM4SF4P48230 202 aa19.41■□□□□ 0.7
HMGCL-209ENST00000513148 TRDNQ13061 729 aa19.41■□□□□ 0.7
HMGCL-209ENST00000513148 IFNL1Q8IU54 200 aa19.41■□□□□ 0.7
HMGCL-209ENST00000513148 SIAH1Q8IUQ4 282 aa19.41■□□□□ 0.7
HMGCL-209ENST00000513148 ZKSCAN3Q9BRR0 538 aa19.41■□□□□ 0.7
HMGCL-209ENST00000513148 CNNM2Q9H8M5 875 aa19.41■□□□□ 0.7
HMGCL-209ENST00000513148 IGKV6D-41A0A0C4DH26 115 aa19.41■□□□□ 0.7
HMGCL-209ENST00000513148 INHBEP58166 350 aa19.41■□□□□ 0.7
HMGCL-209ENST00000513148 MAP2K1Q02750 393 aaPredicted RBP19.41■□□□□ 0.7
HMGCL-209ENST00000513148 MOGSQ13724 837 aa19.41■□□□□ 0.7
HMGCL-209ENST00000513148 RNF20Q5VTR2 975 aa19.41■□□□□ 0.7
HMGCL-209ENST00000513148 JMYQ8N9B5 988 aa19.41■□□□□ 0.7
HMGCL-209ENST00000513148 KRT23Q9C075 422 aa19.41■□□□□ 0.7
HMGCL-209ENST00000513148 IL17RBQ9NRM6 502 aa19.41■□□□□ 0.7
HMGCL-209ENST00000513148 MTMR4Q9NYA4 1195 aa19.41■□□□□ 0.7
HMGCL-209ENST00000513148 CLIP2Q9UDT6 1046 aa19.41■□□□□ 0.7
HMGCL-209ENST00000513148 ISY1Q9ULR0 285 aaKnown RBP19.41■□□□□ 0.7
HMGCL-209ENST00000513148 STX8Q9UNK0 236 aa19.41■□□□□ 0.7
HMGCL-209ENST00000513148 TESPA1A2RU30 521 aaPredicted RBP19.4■□□□□ 0.7
HMGCL-209ENST00000513148 BTBD19C9JJ37 291 aa19.4■□□□□ 0.7
HMGCL-209ENST00000513148 RALYLQ86SE5 291 aaKnown RBP19.4■□□□□ 0.7
HMGCL-209ENST00000513148 TMOD4Q9NZQ9 345 aa19.4■□□□□ 0.7
HMGCL-209ENST00000513148 TREML2Q5T2D2 321 aa19.39■□□□□ 0.69
HMGCL-209ENST00000513148 FASTKD5Q7L8L6 764 aaKnown RBP19.39■□□□□ 0.69
HMGCL-209ENST00000513148 REM2Q8IYK8 340 aaPredicted RBP19.39■□□□□ 0.69
HMGCL-209ENST00000513148 BEGAINQ9BUH8 593 aa19.39■□□□□ 0.69
HMGCL-209ENST00000513148 KIAA1683Q9H0B3 1180 aa19.39■□□□□ 0.69
HMGCL-209ENST00000513148 C19orf81C9J6K1 198 aa19.39■□□□□ 0.69
HMGCL-209ENST00000513148 TTLL1O95922 423 aa19.39■□□□□ 0.69
HMGCL-209ENST00000513148 USP17L2Q6R6M4 530 aa19.39■□□□□ 0.69
HMGCL-209ENST00000513148 RASEFQ8IZ41 740 aa19.39■□□□□ 0.69
HMGCL-209ENST00000513148 LRRC47Q8N1G4 583 aaKnown RBP19.39■□□□□ 0.69
HMGCL-209ENST00000513148 NCOA7Q8NI08 942 aa19.39■□□□□ 0.69
HMGCL-209ENST00000513148 SH2D4AQ9H788 454 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms