RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-231ENST00000513098 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.18■□□□□ 0.021e-12■■■□□ 15.4
UBE2D3-231ENST00000513098 BOLA2Q9H3K6 86 aa15.18■□□□□ 0.02
UBE2D3-231ENST00000513098 DCTPP1Q9H773 170 aa15.18■□□□□ 0.02
UBE2D3-231ENST00000513098 ATP8A2Q9NTI2 1148 aa15.18■□□□□ 0.02
UBE2D3-231ENST00000513098 MCM9Q9NXL9 1143 aa15.18■□□□□ 0.02
UBE2D3-231ENST00000513098 PCDH10Q9P2E7 1040 aa15.18■□□□□ 0.02
UBE2D3-231ENST00000513098 HMGCRP04035 888 aa15.17■□□□□ 0.02
UBE2D3-231ENST00000513098 ERVK-9P63128 1117 aa15.17■□□□□ 0.02
UBE2D3-231ENST00000513098 ERVK-24P63145 666 aa15.17■□□□□ 0.02
UBE2D3-231ENST00000513098 RAB3GAP1Q15042 981 aa15.17■□□□□ 0.02
UBE2D3-231ENST00000513098 HABP4Q5JVS0 413 aaKnown RBP15.17■□□□□ 0.02
UBE2D3-231ENST00000513098 LCORLQ8N3X6 602 aa15.17■□□□□ 0.02
UBE2D3-231ENST00000513098 USP6NLQ92738 828 aa15.17■□□□□ 0.02
UBE2D3-231ENST00000513098 EDC3Q96F86 508 aaKnown RBP15.17■□□□□ 0.02
UBE2D3-231ENST00000513098 SWAP70Q9UH65 585 aa15.17■□□□□ 0.02
UBE2D3-231ENST00000513098 RABGAP1Q9Y3P9 1069 aa15.17■□□□□ 0.02
UBE2D3-231ENST00000513098 DDX60LQ5H9U9 1706 aaKnown RBP15.17■□□□□ 0.02
UBE2D3-231ENST00000513098 TRMT44Q8IYL2 757 aaKnown RBP15.16■□□□□ 0.02
UBE2D3-231ENST00000513098 ACER1Q8TDN7 264 aa15.16■□□□□ 0.02
UBE2D3-231ENST00000513098 SDR42E1Q8WUS8 393 aa15.16■□□□□ 0.02
UBE2D3-231ENST00000513098 SOCS4Q8WXH5 440 aa15.16■□□□□ 0.02
UBE2D3-231ENST00000513098 NUDT12Q9BQG2 462 aa15.16■□□□□ 0.02
UBE2D3-231ENST00000513098 HTATIP2Q9BUP3 242 aa15.16■□□□□ 0.02
UBE2D3-231ENST00000513098 RPTORQ8N122 1335 aa15.16■□□□□ 0.02
UBE2D3-231ENST00000513098 PLXNB2O15031 1838 aa15.15■□□□□ 0.02
UBE2D3-231ENST00000513098 TFRCP02786 760 aaKnown RBP15.15■□□□□ 0.02
UBE2D3-231ENST00000513098 VCAM1P19320 739 aa15.15■□□□□ 0.02
UBE2D3-231ENST00000513098 MORN1Q5T089 497 aa15.15■□□□□ 0.02
UBE2D3-231ENST00000513098 MAP3K21Q5TCX8 1036 aa15.15■□□□□ 0.02
UBE2D3-231ENST00000513098 ZSCAN25Q6NSZ9 544 aa15.15■□□□□ 0.02
UBE2D3-231ENST00000513098 ANKLE1Q8NAG6 615 aa15.15■□□□□ 0.02
UBE2D3-231ENST00000513098 DEFB118Q96PH6 123 aa15.15■□□□□ 0.02
UBE2D3-231ENST00000513098 ARMT1Q9H993 441 aa15.15■□□□□ 0.02
UBE2D3-231ENST00000513098 H0YGN5 161 aa15.14■□□□□ 0.01
UBE2D3-231ENST00000513098 CNMDO75829 334 aa15.14■□□□□ 0.01
UBE2D3-231ENST00000513098 FARP2O94887 1054 aaPredicted RBP15.14■□□□□ 0.01
UBE2D3-231ENST00000513098 SEPT2Q15019 361 aa15.14■□□□□ 0.01
UBE2D3-231ENST00000513098 C12orf60Q5U649 245 aa15.14■□□□□ 0.01
UBE2D3-231ENST00000513098 TMEM179Q6ZVK1 233 aa15.14■□□□□ 0.01
UBE2D3-231ENST00000513098 CCDC17Q96LX7 622 aa15.14■□□□□ 0.01
UBE2D3-231ENST00000513098 FEZ1Q99689 392 aa15.14■□□□□ 0.01
UBE2D3-231ENST00000513098 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.14■□□□□ 0.01
UBE2D3-231ENST00000513098 PORCNQ9H237 461 aa15.14■□□□□ 0.01
UBE2D3-231ENST00000513098 HMX1Q9NP08 348 aaPredicted RBP15.14■□□□□ 0.01
UBE2D3-231ENST00000513098 ECHDC1Q9NTX5 307 aa15.14■□□□□ 0.01
UBE2D3-231ENST00000513098 A0A1W2PRG0 241 aa15.13■□□□□ 0.01
UBE2D3-231ENST00000513098 PRKAB2O43741 272 aa15.13■□□□□ 0.01
UBE2D3-231ENST00000513098 PEX10O60683 326 aa15.13■□□□□ 0.01
UBE2D3-231ENST00000513098 MBD4O95243 580 aa15.13■□□□□ 0.01
UBE2D3-231ENST00000513098 CCNA1P78396 465 aa15.13■□□□□ 0.01
UBE2D3-231ENST00000513098 EVX2Q03828 476 aa15.13■□□□□ 0.01
UBE2D3-231ENST00000513098 SLFNL1Q499Z3 407 aa15.13■□□□□ 0.01
UBE2D3-231ENST00000513098 GPR142Q7Z601 462 aa15.13■□□□□ 0.01
UBE2D3-231ENST00000513098 PLEKHH3Q7Z736 793 aa15.13■□□□□ 0.01
UBE2D3-231ENST00000513098 SIAH1Q8IUQ4 282 aa15.13■□□□□ 0.01
UBE2D3-231ENST00000513098 TRIB2Q92519 343 aa15.13■□□□□ 0.01
UBE2D3-231ENST00000513098 DPF3Q92784 378 aa15.13■□□□□ 0.01
UBE2D3-231ENST00000513098 HOXC10Q9NYD6 342 aa15.13■□□□□ 0.01
UBE2D3-231ENST00000513098 NAV1Q8NEY1 1877 aa15.12■□□□□ 0.01
UBE2D3-231ENST00000513098 SMARCA5O60264 1052 aaPredicted RBP15.12■□□□□ 0.01
UBE2D3-231ENST00000513098 CYP2D6P10635 497 aa15.12■□□□□ 0.01
UBE2D3-231ENST00000513098 RGS2P41220 211 aa15.12■□□□□ 0.01
UBE2D3-231ENST00000513098 COG2Q14746 738 aa15.12■□□□□ 0.01
UBE2D3-231ENST00000513098 COLQQ9Y215 455 aaPredicted RBP15.12■□□□□ 0.01
UBE2D3-231ENST00000513098 NR2E3Q9Y5X4 410 aa15.12■□□□□ 0.01
UBE2D3-231ENST00000513098 TRIOBPQ9H2D6 2365 aa15.12■□□□□ 0.01
UBE2D3-231ENST00000513098 SZT2Q5T011 3432 aa15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 SPDYE16A6NNV3 312 aaPredicted RBP15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 USP17L12C9JPN9 530 aa15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 USP17L21D6R901 530 aa15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 GLRX3O76003 335 aaKnown RBP15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 HOXC6P09630 235 aa15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 CYP2B6P20813 491 aa15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 CDK8P49336 464 aa15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 TRIM32Q13049 653 aa15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 ZYXQ15942 572 aaKnown RBP15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 GIMAP6Q6P9H5 292 aa15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 C16orf86Q6ZW13 317 aa15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 CCAR1Q8IX12 1150 aaKnown RBP15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 KBTBD3Q8NAB2 608 aa15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 LPAR1Q92633 364 aa15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 DYNLL2Q96FJ2 89 aa15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 DDRGK1Q96HY6 314 aa15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 PAGR1Q9BTK6 254 aa15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 PUS7LQ9H0K6 701 aaKnown RBP15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 RPAP3Q9H6T3 665 aaPredicted RBP15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 OGDHLQ9ULD0 1010 aa15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 TMX2Q9Y320 296 aa15.11■□□□□ 0.01
UBE2D3-231ENST00000513098 MYH7P12883 1935 aa15.1■□□□□ 0.01
UBE2D3-231ENST00000513098 SLC15A5A6NIM6 579 aa15.1■□□□□ 0.01
UBE2D3-231ENST00000513098 MPHOSPH10O00566 681 aaKnown RBP15.1■□□□□ 0.01
UBE2D3-231ENST00000513098 IGHA2P01877 340 aa15.1■□□□□ 0.01
UBE2D3-231ENST00000513098 CHGBP05060 677 aa15.1■□□□□ 0.01
UBE2D3-231ENST00000513098 PTPREP23469 700 aa15.1■□□□□ 0.01
UBE2D3-231ENST00000513098 MNX1P50219 401 aaPredicted RBP15.1■□□□□ 0.01
UBE2D3-231ENST00000513098 MAP2K5Q13163 448 aa15.1■□□□□ 0.01
UBE2D3-231ENST00000513098 SBK1Q52WX2 424 aa15.1■□□□□ 0.01
UBE2D3-231ENST00000513098 CTR9Q6PD62 1173 aa15.1■□□□□ 0.01
UBE2D3-231ENST00000513098 NECAB2Q7Z6G3 386 aa15.1■□□□□ 0.01
UBE2D3-231ENST00000513098 AMOTL1Q8IY63 956 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms