RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 FEZ1Q99689 392 aa20.66■□□□□ 0.9
DDR1-270ENST00000513043 TBC1D2Q9BYX2 928 aa20.66■□□□□ 0.9
DDR1-270ENST00000513043 ANO2Q9NQ90 1003 aa20.66■□□□□ 0.9
DDR1-270ENST00000513043 CTNNA3Q9UI47 895 aa20.66■□□□□ 0.9
DDR1-270ENST00000513043 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.66■□□□□ 0.9
DDR1-270ENST00000513043 ATP2B2Q01814 1243 aa20.65■□□□□ 0.9
DDR1-270ENST00000513043 MOGSQ13724 837 aa20.65■□□□□ 0.9
DDR1-270ENST00000513043 IMMTQ16891 758 aaKnown RBP20.65■□□□□ 0.9
DDR1-270ENST00000513043 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.65■□□□□ 0.9
DDR1-270ENST00000513043 USP17L10C9JJH3 530 aa20.64■□□□□ 0.89
DDR1-270ENST00000513043 RANBP6O60518 1105 aaKnown RBP20.64■□□□□ 0.89
DDR1-270ENST00000513043 TBC1D8O95759 1140 aa20.64■□□□□ 0.89
DDR1-270ENST00000513043 BACE1P56817 501 aa20.64■□□□□ 0.89
DDR1-270ENST00000513043 TFAP4Q01664 338 aa20.64■□□□□ 0.89
DDR1-270ENST00000513043 ICA1Q05084 483 aa20.64■□□□□ 0.89
DDR1-270ENST00000513043 OTUD7BQ6GQQ9 843 aa20.64■□□□□ 0.89
DDR1-270ENST00000513043 LSG1Q9H089 658 aaKnown RBP20.64■□□□□ 0.89
DDR1-270ENST00000513043 U3KPZ7 1027 aaPredicted RBP20.64■□□□□ 0.89
DDR1-270ENST00000513043 TSPY3P0CV98 308 aa20.63■□□□□ 0.89
DDR1-270ENST00000513043 TSPY8P0CW00 308 aa20.63■□□□□ 0.89
DDR1-270ENST00000513043 AKNAD1Q5T1N1 836 aa20.63■□□□□ 0.89
DDR1-270ENST00000513043 GPAT2Q6NUI2 795 aa20.63■□□□□ 0.89
DDR1-270ENST00000513043 MFSD6Q6ZSS7 791 aa20.63■□□□□ 0.89
DDR1-270ENST00000513043 FASTKD5Q7L8L6 764 aaKnown RBP20.63■□□□□ 0.89
DDR1-270ENST00000513043 TNS4Q8IZW8 715 aa20.63■□□□□ 0.89
DDR1-270ENST00000513043 RBM8AQ9Y5S9 174 aaKnown RBP20.63■□□□□ 0.89
DDR1-270ENST00000513043 NEDD4P46934 1319 aa20.62■□□□□ 0.89
DDR1-270ENST00000513043 A0A1W2PRG0 241 aa20.62■□□□□ 0.89
DDR1-270ENST00000513043 TSPY2A6NKD2 308 aa20.62■□□□□ 0.89
DDR1-270ENST00000513043 ORC4O43929 436 aa20.62■□□□□ 0.89
DDR1-270ENST00000513043 EEF2P13639 858 aaKnown RBP20.62■□□□□ 0.89
DDR1-270ENST00000513043 TREML2Q5T2D2 321 aa20.62■□□□□ 0.89
DDR1-270ENST00000513043 STAG1Q8WVM7 1258 aa20.62■□□□□ 0.89
DDR1-270ENST00000513043 MAP4K1Q92918 833 aa20.62■□□□□ 0.89
DDR1-270ENST00000513043 R3HDMLQ9H3Y0 253 aa20.62■□□□□ 0.89
DDR1-270ENST00000513043 KANSL2Q9H9L4 492 aa20.62■□□□□ 0.89
DDR1-270ENST00000513043 TMOD4Q9NZQ9 345 aa20.62■□□□□ 0.89
DDR1-270ENST00000513043 PTPRFP10586 1907 aa20.62■□□□□ 0.89
DDR1-270ENST00000513043 C19orf81C9J6K1 198 aa20.61■□□□□ 0.89
DDR1-270ENST00000513043 PDHXO00330 501 aa20.61■□□□□ 0.89
DDR1-270ENST00000513043 CA12O43570 354 aa20.61■□□□□ 0.89
DDR1-270ENST00000513043 ALDH1A1P00352 501 aa20.61■□□□□ 0.89
DDR1-270ENST00000513043 FGRP09769 529 aa20.61■□□□□ 0.89
DDR1-270ENST00000513043 CTCFP49711 727 aaPredicted RBP20.61■□□□□ 0.89
DDR1-270ENST00000513043 TAF1CQ15572 869 aaPredicted RBP20.61■□□□□ 0.89
DDR1-270ENST00000513043 SH3D19Q5HYK7 790 aa20.61■□□□□ 0.89
DDR1-270ENST00000513043 ANKRD23Q86SG2 305 aa20.61■□□□□ 0.89
DDR1-270ENST00000513043 SIAH1Q8IUQ4 282 aa20.61■□□□□ 0.89
DDR1-270ENST00000513043 NKX2-3Q8TAU0 364 aa20.61■□□□□ 0.89
DDR1-270ENST00000513043 RNF41Q9H4P4 317 aaPredicted RBP20.61■□□□□ 0.89
DDR1-270ENST00000513043 ARHGEF10LQ9HCE6 1279 aa20.61■□□□□ 0.89
DDR1-270ENST00000513043 EMILIN3Q9NT22 766 aa20.61■□□□□ 0.89
DDR1-270ENST00000513043 SAGE1Q9NXZ1 904 aa20.61■□□□□ 0.89
DDR1-270ENST00000513043 LAMA4Q16363 1823 aa20.61■□□□□ 0.89
DDR1-270ENST00000513043 CRHR2Q13324 411 aa20.6■□□□□ 0.89
DDR1-270ENST00000513043 USP17L2Q6R6M4 530 aa20.6■□□□□ 0.89
DDR1-270ENST00000513043 PROCA1Q8NCQ7 364 aaPredicted RBP20.6■□□□□ 0.89
DDR1-270ENST00000513043 NEDD1Q8NHV4 660 aa20.6■□□□□ 0.89
DDR1-270ENST00000513043 CEP95Q96GE4 821 aa20.6■□□□□ 0.89
DDR1-270ENST00000513043 KIAA1683Q9H0B3 1180 aa20.6■□□□□ 0.89
DDR1-270ENST00000513043 AGTPBP1Q9UPW5 1226 aa20.6■□□□□ 0.89
DDR1-270ENST00000513043 TAF6LQ9Y6J9 622 aa20.6■□□□□ 0.89
DDR1-270ENST00000513043 IGKV6D-41A0A0C4DH26 115 aa20.59■□□□□ 0.89
DDR1-270ENST00000513043 NMT2O60551 498 aa20.59■□□□□ 0.89
DDR1-270ENST00000513043 CYP21A2P08686 494 aa20.59■□□□□ 0.89
DDR1-270ENST00000513043 HSPA8P11142 646 aaKnown RBP20.59■□□□□ 0.89
DDR1-270ENST00000513043 LBX1P52954 281 aa20.59■□□□□ 0.89
DDR1-270ENST00000513043 GREB1LQ9C091 1923 aaPredicted RBP20.59■□□□□ 0.89
DDR1-270ENST00000513043 B4E1Z4 1266 aa20.58■□□□□ 0.89
DDR1-270ENST00000513043 RAD21O60216 631 aa20.58■□□□□ 0.89
DDR1-270ENST00000513043 CYP2C8P10632 490 aa20.58■□□□□ 0.89
DDR1-270ENST00000513043 USP14P54578 494 aa20.58■□□□□ 0.89
DDR1-270ENST00000513043 PRDM10Q9NQV6 1147 aa20.58■□□□□ 0.89
DDR1-270ENST00000513043 MTMR4Q9NYA4 1195 aa20.58■□□□□ 0.89
DDR1-270ENST00000513043 CLIP2Q9UDT6 1046 aa20.58■□□□□ 0.89
DDR1-270ENST00000513043 PLIN4Q96Q06 1357 aa20.58■□□□□ 0.88
DDR1-270ENST00000513043 LOC285556D6RIA3 1793 aa20.57■□□□□ 0.88
DDR1-270ENST00000513043 KDM4AO75164 1064 aa20.57■□□□□ 0.88
DDR1-270ENST00000513043 PCP11498 1178 aaKnown RBP20.57■□□□□ 0.88
DDR1-270ENST00000513043 KIAA1755Q5JYT7 1200 aa20.57■□□□□ 0.88
DDR1-270ENST00000513043 SPICE1Q8N0Z3 855 aa20.57■□□□□ 0.88
DDR1-270ENST00000513043 ESR2Q92731 530 aa20.57■□□□□ 0.88
DDR1-270ENST00000513043 SH2D4AQ9H788 454 aa20.57■□□□□ 0.88
DDR1-270ENST00000513043 ZFYVE28Q9HCC9 887 aa20.57■□□□□ 0.88
DDR1-270ENST00000513043 IL17RBQ9NRM6 502 aa20.57■□□□□ 0.88
DDR1-270ENST00000513043 NYAP2Q9P242 653 aa20.57■□□□□ 0.88
DDR1-270ENST00000513043 TMX2Q9Y320 296 aa20.57■□□□□ 0.88
DDR1-270ENST00000513043 VCAM1P19320 739 aa20.56■□□□□ 0.88
DDR1-270ENST00000513043 LRRC47Q8N1G4 583 aaKnown RBP20.56■□□□□ 0.88
DDR1-270ENST00000513043 C12orf42Q96LP6 360 aa20.56■□□□□ 0.88
DDR1-270ENST00000513043 ZKSCAN3Q9BRR0 538 aa20.56■□□□□ 0.88
DDR1-270ENST00000513043 VCPKMTQ9H867 229 aa20.56■□□□□ 0.88
DDR1-270ENST00000513043 ZCCHC17Q9NP64 241 aaKnown RBP20.56■□□□□ 0.88
DDR1-270ENST00000513043 STX8Q9UNK0 236 aa20.56■□□□□ 0.88
DDR1-270ENST00000513043 SLC27A2O14975 620 aa20.55■□□□□ 0.88
DDR1-270ENST00000513043 TTLL1O95922 423 aa20.55■□□□□ 0.88
DDR1-270ENST00000513043 CREB3L3Q68CJ9 461 aa20.55■□□□□ 0.88
DDR1-270ENST00000513043 STOX1Q6ZVD7 989 aa20.55■□□□□ 0.88
DDR1-270ENST00000513043 CHMP4CQ96CF2 233 aa20.55■□□□□ 0.88
DDR1-270ENST00000513043 PARK7Q99497 189 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms