RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 SHTN1A0MZ66 631 aa4.74□□□□□ -1.65
VCAN-209ENST00000513016 CLRN2A0PK11 232 aa4.74□□□□□ -1.65
VCAN-209ENST00000513016 PFDN6O15212 129 aa4.74□□□□□ -1.65
VCAN-209ENST00000513016 CIAO1O76071 339 aa4.74□□□□□ -1.65
VCAN-209ENST00000513016 ZNF165P49910 485 aa4.74□□□□□ -1.65
VCAN-209ENST00000513016 ASPRV1Q53RT3 343 aa4.74□□□□□ -1.65
VCAN-209ENST00000513016 MIS18BP1Q6P0N0 1132 aa4.74□□□□□ -1.65
VCAN-209ENST00000513016 TMX3Q96JJ7 454 aa4.74□□□□□ -1.65
VCAN-209ENST00000513016 PI4KBQ9UBF8 816 aa4.74□□□□□ -1.65
VCAN-209ENST00000513016 SLC8A2Q9UPR5 921 aa4.74□□□□□ -1.65
VCAN-209ENST00000513016 PHLPP2Q6ZVD8 1323 aa4.74□□□□□ -1.65
VCAN-209ENST00000513016 KDRP35968 1356 aa4.74□□□□□ -1.65
VCAN-209ENST00000513016 CCDC175P0C221 793 aa4.74□□□□□ -1.65
VCAN-209ENST00000513016 GJC1P36383 396 aa4.74□□□□□ -1.65
VCAN-209ENST00000513016 ZNF174Q15697 407 aa4.74□□□□□ -1.65
VCAN-209ENST00000513016 DCAF17Q5H9S7 520 aaPredicted RBP4.74□□□□□ -1.65
VCAN-209ENST00000513016 TTC38Q5R3I4 469 aa4.74□□□□□ -1.65
VCAN-209ENST00000513016 RC3H1Q5TC82 1133 aaKnown RBP4.74□□□□□ -1.65
VCAN-209ENST00000513016 TSHZ3Q63HK5 1081 aa4.74□□□□□ -1.65
VCAN-209ENST00000513016 BBS5Q8N3I7 341 aa4.74□□□□□ -1.65
VCAN-209ENST00000513016 ZHX1Q9UKY1 873 aaPredicted RBP4.74□□□□□ -1.65
VCAN-209ENST00000513016 NUB1Q9Y5A7 615 aa4.74□□□□□ -1.65
VCAN-209ENST00000513016 USP17L12C9JPN9 530 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 USP17L21D6R901 530 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 CCND2P30279 289 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 TMCO3Q6UWJ1 677 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 ZBTB33Q86T24 672 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 CCDC42Q96M95 316 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 AMNQ9BXJ7 453 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 CARD14Q9BXL6 1004 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 PSTPIP2Q9H939 334 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 GPBP1L1Q9HC44 474 aaPredicted RBP4.73□□□□□ -1.65
VCAN-209ENST00000513016 HESX1Q9UBX0 185 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 ASAP1Q9ULH1 1129 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 A0A1W2PRG0 241 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 CCDC66A2RUB6 948 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 N4BP1O75113 896 aaKnown RBP4.73□□□□□ -1.65
VCAN-209ENST00000513016 RAD17O75943 681 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 TUBB4AP04350 444 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 BCRP11274 1271 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 NFKBIAP25963 317 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 LIG4P49917 911 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 GABPAQ06546 454 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 KIF5AQ12840 1032 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 CCDC184Q52MB2 194 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 SEL1L2Q5TEA6 688 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 ZNF713Q8N859 430 aaPredicted RBP4.73□□□□□ -1.65
VCAN-209ENST00000513016 NAP1L3Q99457 506 aaPredicted RBP4.73□□□□□ -1.65
VCAN-209ENST00000513016 GRPEL1Q9HAV7 217 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 E7EVH7 732 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 CD19P15391 556 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 CUL4BQ13620 913 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 POSTNQ15063 836 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 TXNRD1Q16881 649 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 PIK3AP1Q6ZUJ8 805 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 FASTKD5Q7L8L6 764 aaKnown RBP4.73□□□□□ -1.65
VCAN-209ENST00000513016 PLA2G4DQ86XP0 818 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 TSPYL6Q8N831 410 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 TESK2Q96S53 571 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 BSDC1Q9NW68 430 aaPredicted RBP4.73□□□□□ -1.65
VCAN-209ENST00000513016 HOXC10Q9NYD6 342 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 PLEKHG2Q9H7P9 1386 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 F8W8V4 182 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 EXOC3O60645 756 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 ZBTB7AO95365 584 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 GNA14O95837 355 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 FDX1P10109 184 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 ALDH3A1P30838 453 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 GYG1P46976 350 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 TUBB4BP68371 445 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 RNASELQ05823 741 aaKnown RBP4.73□□□□□ -1.65
VCAN-209ENST00000513016 XKR9Q5GH70 373 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 MICALCLQ6ZW33 695 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 SRGAP1Q7Z6B7 1085 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 DAAM2Q86T65 1068 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 NARFQ9UHQ1 456 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 PBRM1Q86U86 1689 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 SYCE3A1L190 88 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 SMCO2A6NFE2 343 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 GOLGA8CPA6NN73 597 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 DDAH1O94760 285 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 ASNSP08243 561 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 CLUL1Q15846 466 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 ZNF569Q5MCW4 686 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 SPECC1LQ69YQ0 1117 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 LARP6Q9BRS8 491 aaKnown RBP4.73□□□□□ -1.65
VCAN-209ENST00000513016 INO80BQ9C086 356 aaPredicted RBP4.73□□□□□ -1.65
VCAN-209ENST00000513016 DBNDD1Q9H9R9 158 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 IFT122Q9HBG6 1241 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 JADE2Q9NQC1 790 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 ATG3Q9NT62 314 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 ZBTB1Q9Y2K1 713 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 UNC13AQ9UPW8 1703 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 TMEM110-MUSTN1A8MSY1 372 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 hCG_1984214I3L0E3 225 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 STK25O00506 426 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 GIPC1O14908 333 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 KRT86O43790 486 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 C21orf2O43822 256 aa4.73□□□□□ -1.65
VCAN-209ENST00000513016 XPAP23025 273 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms