RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 FAM180BQ6P0A1 224 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 POTEAQ6S8J7 498 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 TPTE2Q6XPS3 522 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 DTHD1Q6ZMT9 781 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 C1orf122Q6ZSJ8 110 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 EPM2AIP1Q7L775 607 aaPredicted RBP3.95□□□□□ -1.78
PVT1-202ENST00000512617 OTOP3Q7RTS5 596 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 RPAINQ86UA6 219 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 PNMA8AQ86V59 439 aaPredicted RBP3.95□□□□□ -1.78
PVT1-202ENST00000512617 SNX32Q86XE0 403 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 LMNTD2Q8IXW0 634 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 NBPF15Q8N660 670 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 RBBP8NLQ8NC74 664 aaPredicted RBP3.95□□□□□ -1.78
PVT1-202ENST00000512617 IL17REQ8NFR9 667 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 FRS2Q8WU20 508 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 NUP133Q8WUM0 1156 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 FOXJ1Q92949 421 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 KISS1RQ969F8 398 aaPredicted RBP3.95□□□□□ -1.78
PVT1-202ENST00000512617 PLD4Q96BZ4 506 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 EXOC2Q96KP1 924 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 KCTD15Q96SI1 283 aaPredicted RBP3.95□□□□□ -1.78
PVT1-202ENST00000512617 KCNK17Q96T54 332 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 CENPOQ9BU64 300 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 MRPL4Q9BYD3 311 aaKnown RBP3.95□□□□□ -1.78
PVT1-202ENST00000512617 PHACTR1Q9C0D0 580 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 OSBPL5Q9H0X9 879 aaPredicted RBP3.95□□□□□ -1.78
PVT1-202ENST00000512617 EHD4Q9H223 541 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 IFT22Q9H7X7 185 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 TCF7L1Q9HCS4 588 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 DDX21Q9NR30 783 aaKnown RBP eCLIP3.95□□□□□ -1.78
PVT1-202ENST00000512617 SMC4Q9NTJ3 1288 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 RABGEF1Q9UJ41 708 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 ODF2LQ9ULJ1 636 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 SYNPO2Q9UMS6 1093 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 GIT1Q9Y2X7 761 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 SH3BP1Q9Y3L3 701 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 TTLL3Q9Y4R7 772 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 WDR97A6NE52 1622 aa3.95□□□□□ -1.78
PVT1-202ENST00000512617 FGD5Q6ZNL6 1462 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 RAD54L2Q9Y4B4 1467 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 A0A087WZG4 1122 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 hCG_1642624A0A1W2PR95 340 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 CDK2AP1O14519 115 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 DDX3YO15523 660 aaKnown RBP3.94□□□□□ -1.78
PVT1-202ENST00000512617 TMCC2O75069 709 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 MBD4O95243 580 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 MAP3K6O95382 1288 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 F13A1P00488 732 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 CELA3AP09093 270 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 PYGMP11217 842 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 ZKSCAN1P17029 563 aaPredicted RBP3.94□□□□□ -1.78
PVT1-202ENST00000512617 TFE3P19532 575 aaPredicted RBP3.94□□□□□ -1.78
PVT1-202ENST00000512617 LPOP22079 712 aaPredicted RBP3.94□□□□□ -1.78
PVT1-202ENST00000512617 TSPAN7P41732 249 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 CLCQ05315 142 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 PRKG2Q13237 762 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 GALEQ14376 348 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 NCAPHQ15003 741 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 PCBP1Q15365 356 aaKnown RBP eCLIP3.94□□□□□ -1.781e-8■■□□□ 13.7
PVT1-202ENST00000512617 TEAD4Q15561 434 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 SLC10A6Q3KNW5 377 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 C4orf48Q5BLP8 95 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 FOXB2Q5VYV0 432 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 DIEXFQ68CQ4 756 aaKnown RBP3.94□□□□□ -1.78
PVT1-202ENST00000512617 HEATR6Q6AI08 1181 aaKnown RBP3.94□□□□□ -1.78
PVT1-202ENST00000512617 FAAH2Q6GMR7 532 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 TTBK2Q6IQ55 1244 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 PDE12Q6L8Q7 609 aaKnown RBP3.94□□□□□ -1.78
PVT1-202ENST00000512617 IGF2-ASQ6U949 168 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 BNC2Q6ZN30 1099 aaPredicted RBP3.94□□□□□ -1.78
PVT1-202ENST00000512617 AGMOQ6ZNB7 445 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 TTC6Q86TZ1 520 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 LCA5Q86VQ0 697 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 NLRP8Q86W28 1048 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 SCUBE3Q8IX30 993 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 REXO1Q8N1G1 1221 aaKnown RBP3.94□□□□□ -1.78
PVT1-202ENST00000512617 CCDC24Q8N4L8 307 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 CPA6Q8N4T0 437 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 GLIS3Q8NEA6 775 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 GATAD2BQ8WXI9 593 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 NELL1Q92832 810 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 ATP6V1E2Q96A05 226 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 GCC1Q96CN9 775 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 CCDC34Q96HJ3 373 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 ZNF496Q96IT1 587 aaPredicted RBP3.94□□□□□ -1.78
PVT1-202ENST00000512617 CEP44Q9C0F1 390 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 PDGFDQ9GZP0 370 aaPredicted RBP3.94□□□□□ -1.78
PVT1-202ENST00000512617 EPN3Q9H201 632 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 CXorf56Q9H5V9 222 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 CD248Q9HCU0 757 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 BRMS1Q9HCU9 246 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 ANLNQ9NQW6 1124 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 TRMT13Q9NUP7 481 aaKnown RBP3.94□□□□□ -1.78
PVT1-202ENST00000512617 RRN3Q9NYV6 651 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 TSR3Q9UJK0 312 aaKnown RBP3.94□□□□□ -1.78
PVT1-202ENST00000512617 FBXO10Q9UK96 956 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 APOBEC2Q9Y235 224 aaKnown RBP3.94□□□□□ -1.78
PVT1-202ENST00000512617 PARP3Q9Y6F1 533 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 ITIH6Q6UXX5 1313 aa3.94□□□□□ -1.78
PVT1-202ENST00000512617 AQRO60306 1485 aaKnown RBP eCLIP3.93□□□□□ -1.781e-7■■■■■ 30.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms