RNA–Protein interactions for RNA: ENST00000512374.1

SLC1A3-211, Transcript of solute carrier family 1 member 3, humanhuman

TSL 1 (best)

Gene SLC1A3, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-211ENST00000512374 BACE1P56817 501 aa11.85□□□□□ -0.51
SLC1A3-211ENST00000512374 G3BP1Q13283 466 aaKnown RBP eCLIP11.85□□□□□ -0.51
SLC1A3-211ENST00000512374 GORABQ5T7V8 394 aa11.85□□□□□ -0.51
SLC1A3-211ENST00000512374 GADL1Q6ZQY3 521 aa11.85□□□□□ -0.51
SLC1A3-211ENST00000512374 KCTD12Q96CX2 325 aaKnown RBP11.85□□□□□ -0.51
SLC1A3-211ENST00000512374 UNC93B1Q9H1C4 597 aa11.85□□□□□ -0.51
SLC1A3-211ENST00000512374 HMX1Q9NP08 348 aaPredicted RBP11.85□□□□□ -0.51
SLC1A3-211ENST00000512374 DDX4Q9NQI0 724 aaKnown RBP11.85□□□□□ -0.51
SLC1A3-211ENST00000512374 HMG20BQ9P0W2 317 aa11.85□□□□□ -0.51
SLC1A3-211ENST00000512374 RBM27Q9P2N5 1060 aaKnown RBP11.85□□□□□ -0.51
SLC1A3-211ENST00000512374 GJD2Q9UKL4 321 aa11.85□□□□□ -0.51
SLC1A3-211ENST00000512374 PHIPQ8WWQ0 1821 aa11.85□□□□□ -0.51
SLC1A3-211ENST00000512374 MAPK4P31152 587 aa11.84□□□□□ -0.51
SLC1A3-211ENST00000512374 SPP2Q13103 211 aa11.84□□□□□ -0.51
SLC1A3-211ENST00000512374 CCDC158Q5M9N0 1113 aa11.84□□□□□ -0.51
SLC1A3-211ENST00000512374 MAP3K21Q5TCX8 1036 aa11.84□□□□□ -0.51
SLC1A3-211ENST00000512374 MEIS3Q99687 375 aa11.84□□□□□ -0.51
SLC1A3-211ENST00000512374 NBPF3Q9H094 633 aa11.84□□□□□ -0.51
SLC1A3-211ENST00000512374 GABRQQ9UN88 632 aa11.84□□□□□ -0.51
SLC1A3-211ENST00000512374 LOC285556D6RIA3 1793 aa11.84□□□□□ -0.51
SLC1A3-211ENST00000512374 TRIM75PA6NK02 468 aa11.83□□□□□ -0.52
SLC1A3-211ENST00000512374 TFCP2Q12800 502 aa11.83□□□□□ -0.52
SLC1A3-211ENST00000512374 LRIT3Q3SXY7 679 aa11.83□□□□□ -0.52
SLC1A3-211ENST00000512374 LBX2Q6XYB7 198 aa11.83□□□□□ -0.52
SLC1A3-211ENST00000512374 ANKRD13CQ8N6S4 541 aa11.83□□□□□ -0.52
SLC1A3-211ENST00000512374 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.83□□□□□ -0.52
SLC1A3-211ENST00000512374 ASCC2Q9H1I8 757 aaPredicted RBP11.83□□□□□ -0.52
SLC1A3-211ENST00000512374 TMOD4Q9NZQ9 345 aa11.83□□□□□ -0.52
SLC1A3-211ENST00000512374 LRP2BPQ9P2M1 347 aa11.83□□□□□ -0.52
SLC1A3-211ENST00000512374 OGDHLQ9ULD0 1010 aa11.83□□□□□ -0.52
SLC1A3-211ENST00000512374 RANBP2P49792 3224 aaKnown RBP11.82□□□□□ -0.52
SLC1A3-211ENST00000512374 USP17L10C9JJH3 530 aa11.82□□□□□ -0.52
SLC1A3-211ENST00000512374 MSCO60682 206 aa11.82□□□□□ -0.52
SLC1A3-211ENST00000512374 GLRX3O76003 335 aaKnown RBP11.82□□□□□ -0.52
SLC1A3-211ENST00000512374 PTPREP23469 700 aa11.82□□□□□ -0.52
SLC1A3-211ENST00000512374 ADORA1P30542 326 aa11.82□□□□□ -0.52
SLC1A3-211ENST00000512374 GPRC5AQ8NFJ5 357 aa11.82□□□□□ -0.52
SLC1A3-211ENST00000512374 SSH3Q8TE77 659 aa11.82□□□□□ -0.52
SLC1A3-211ENST00000512374 ZNF384Q8TF68 577 aa11.82□□□□□ -0.52
SLC1A3-211ENST00000512374 C12orf42Q96LP6 360 aa11.82□□□□□ -0.52
SLC1A3-211ENST00000512374 DEFB118Q96PH6 123 aa11.82□□□□□ -0.52
SLC1A3-211ENST00000512374 GDF15Q99988 308 aa11.82□□□□□ -0.52
SLC1A3-211ENST00000512374 NUDT12Q9BQG2 462 aa11.82□□□□□ -0.52
SLC1A3-211ENST00000512374 EHD4Q9H223 541 aa11.82□□□□□ -0.52
SLC1A3-211ENST00000512374 PA2G4Q9UQ80 394 aaKnown RBP11.82□□□□□ -0.52
SLC1A3-211ENST00000512374 NOP58Q9Y2X3 529 aaKnown RBP11.82□□□□□ -0.52
SLC1A3-211ENST00000512374 DOCK3Q8IZD9 2030 aa11.81□□□□□ -0.52
SLC1A3-211ENST00000512374 USP14P54578 494 aa11.81□□□□□ -0.52
SLC1A3-211ENST00000512374 CCNA1P78396 465 aa11.81□□□□□ -0.52
SLC1A3-211ENST00000512374 IRX3P78415 501 aaPredicted RBP11.81□□□□□ -0.52
SLC1A3-211ENST00000512374 NAA16Q6N069 864 aaPredicted RBP11.81□□□□□ -0.52
SLC1A3-211ENST00000512374 TEX11Q8IYF3 940 aa11.81□□□□□ -0.52
SLC1A3-211ENST00000512374 NEUROD6Q96NK8 337 aa11.81□□□□□ -0.52
SLC1A3-211ENST00000512374 SLC4A5Q9BY07 1137 aa11.81□□□□□ -0.52
SLC1A3-211ENST00000512374 RABGAP1Q9Y3P9 1069 aa11.81□□□□□ -0.52
SLC1A3-211ENST00000512374 HLA-DOAP06340 250 aa11.8□□□□□ -0.52
SLC1A3-211ENST00000512374 HOXC6P09630 235 aa11.8□□□□□ -0.52
SLC1A3-211ENST00000512374 MCAMP43121 646 aa11.8□□□□□ -0.52
SLC1A3-211ENST00000512374 HMGCS2P54868 508 aa11.8□□□□□ -0.52
SLC1A3-211ENST00000512374 PICALMQ13492 652 aa11.8□□□□□ -0.52
SLC1A3-211ENST00000512374 PDE3AQ14432 1141 aa11.8□□□□□ -0.52
SLC1A3-211ENST00000512374 TREML2Q5T2D2 321 aa11.8□□□□□ -0.52
SLC1A3-211ENST00000512374 TATDN1Q6P1N9 297 aa11.8□□□□□ -0.52
SLC1A3-211ENST00000512374 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.8□□□□□ -0.52
SLC1A3-211ENST00000512374 USP6NLQ92738 828 aa11.8□□□□□ -0.52
SLC1A3-211ENST00000512374 CDCA7LQ96GN5 454 aa11.8□□□□□ -0.52
SLC1A3-211ENST00000512374 RAI14Q9P0K7 980 aa11.8□□□□□ -0.52
SLC1A3-211ENST00000512374 ZSWIM8A7E2V4 1837 aa11.8□□□□□ -0.52
SLC1A3-211ENST00000512374 TRIM27P14373 513 aa11.79□□□□□ -0.52
SLC1A3-211ENST00000512374 ELNP15502 786 aa11.79□□□□□ -0.52
SLC1A3-211ENST00000512374 HERVK_113P62684 666 aa11.79□□□□□ -0.52
SLC1A3-211ENST00000512374 ATP8B2P98198 1209 aa11.79□□□□□ -0.52
SLC1A3-211ENST00000512374 FAM109BQ6ICB4 259 aaPredicted RBP11.79□□□□□ -0.52
SLC1A3-211ENST00000512374 USP17L2Q6R6M4 530 aa11.79□□□□□ -0.52
SLC1A3-211ENST00000512374 TTC6Q86TZ1 520 aa11.79□□□□□ -0.52
SLC1A3-211ENST00000512374 ZDHHC16Q969W1 377 aa11.79□□□□□ -0.52
SLC1A3-211ENST00000512374 PAWRQ96IZ0 340 aaKnown RBP11.79□□□□□ -0.52
SLC1A3-211ENST00000512374 EMILIN3Q9NT22 766 aa11.79□□□□□ -0.52
SLC1A3-211ENST00000512374 STRNO43815 780 aa11.78□□□□□ -0.52
SLC1A3-211ENST00000512374 MYCP01106 439 aaPredicted RBP11.78□□□□□ -0.52
SLC1A3-211ENST00000512374 COL6A1P12109 1028 aa11.78□□□□□ -0.52
SLC1A3-211ENST00000512374 RGS2P41220 211 aa11.78□□□□□ -0.52
SLC1A3-211ENST00000512374 HSP90AB4PQ58FF6 505 aa11.78□□□□□ -0.52
SLC1A3-211ENST00000512374 TNNI3KQ59H18 835 aa11.78□□□□□ -0.52
SLC1A3-211ENST00000512374 DIEXFQ68CQ4 756 aaKnown RBP11.78□□□□□ -0.52
SLC1A3-211ENST00000512374 TRIM34Q9BYJ4 488 aa11.78□□□□□ -0.52
SLC1A3-211ENST00000512374 ADAM33Q9BZ11 813 aa11.78□□□□□ -0.52
SLC1A3-211ENST00000512374 KIAA1683Q9H0B3 1180 aa11.78□□□□□ -0.52
SLC1A3-211ENST00000512374 FPGT-TNNI3KV9GXZ4 949 aa11.78□□□□□ -0.52
SLC1A3-211ENST00000512374 USP17L15C9J2P7 530 aa11.77□□□□□ -0.53
SLC1A3-211ENST00000512374 USP17L13C9JLJ4 530 aa11.77□□□□□ -0.53
SLC1A3-211ENST00000512374 USP17L11C9JVI0 530 aa11.77□□□□□ -0.53
SLC1A3-211ENST00000512374 USP17L18D6R9N7 530 aa11.77□□□□□ -0.53
SLC1A3-211ENST00000512374 USP17L22D6RA61 530 aa11.77□□□□□ -0.53
SLC1A3-211ENST00000512374 USP17L17D6RBQ6 530 aa11.77□□□□□ -0.53
SLC1A3-211ENST00000512374 USP17L19D6RCP7 530 aa11.77□□□□□ -0.53
SLC1A3-211ENST00000512374 USP17L20D6RJB6 530 aa11.77□□□□□ -0.53
SLC1A3-211ENST00000512374 ERVK-9P63128 1117 aa11.77□□□□□ -0.53
SLC1A3-211ENST00000512374 ERVK-24P63145 666 aa11.77□□□□□ -0.53
SLC1A3-211ENST00000512374 USP17L24Q0WX57 530 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms