RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 GADL1Q6ZQY3 521 aa16.28■□□□□ 0.2
CLDND1-224ENST00000511667 CRACR2BQ8N4Y2 399 aaPredicted RBP16.28■□□□□ 0.2
CLDND1-224ENST00000511667 KBTBD3Q8NAB2 608 aa16.28■□□□□ 0.2
CLDND1-224ENST00000511667 SLAIN1Q8ND83 568 aa16.28■□□□□ 0.2
CLDND1-224ENST00000511667 C12orf42Q96LP6 360 aa16.28■□□□□ 0.2
CLDND1-224ENST00000511667 UNC93B1Q9H1C4 597 aa16.28■□□□□ 0.2
CLDND1-224ENST00000511667 ARMT1Q9H993 441 aa16.28■□□□□ 0.2
CLDND1-224ENST00000511667 ATP8A2Q9NTI2 1148 aa16.28■□□□□ 0.2
CLDND1-224ENST00000511667 DOCK3Q8IZD9 2030 aa16.28■□□□□ 0.2
CLDND1-224ENST00000511667 PRKAB2O43741 272 aa16.27■□□□□ 0.2
CLDND1-224ENST00000511667 MBD4O95243 580 aa16.27■□□□□ 0.2
CLDND1-224ENST00000511667 TFRCP02786 760 aaKnown RBP16.27■□□□□ 0.2
CLDND1-224ENST00000511667 FAM110CQ1W6H9 321 aa16.27■□□□□ 0.2
CLDND1-224ENST00000511667 SDR42E1Q8WUS8 393 aa16.27■□□□□ 0.2
CLDND1-224ENST00000511667 PUS7LQ9H0K6 701 aaKnown RBP16.27■□□□□ 0.2
CLDND1-224ENST00000511667 BAZ2AQ9UIF9 1905 aaKnown RBP16.26■□□□□ 0.19
CLDND1-224ENST00000511667 USP17L10C9JJH3 530 aa16.26■□□□□ 0.19
CLDND1-224ENST00000511667 GH2P01242 217 aa16.26■□□□□ 0.19
CLDND1-224ENST00000511667 MTMR2Q13614 643 aa16.26■□□□□ 0.19
CLDND1-224ENST00000511667 ZSCAN25Q6NSZ9 544 aa16.26■□□□□ 0.19
CLDND1-224ENST00000511667 POTEEQ6S8J3 1075 aa16.26■□□□□ 0.19
CLDND1-224ENST00000511667 OTUD7AQ8TE49 926 aaPredicted RBP16.26■□□□□ 0.19
CLDND1-224ENST00000511667 ASCC2Q9H1I8 757 aaPredicted RBP16.26■□□□□ 0.19
CLDND1-224ENST00000511667 EMILIN3Q9NT22 766 aa16.26■□□□□ 0.19
CLDND1-224ENST00000511667 MORF4L1Q9UBU8 362 aa16.26■□□□□ 0.19
CLDND1-224ENST00000511667 PNMA3Q9UL41 463 aa16.26■□□□□ 0.19
CLDND1-224ENST00000511667 ALPK3Q96L96 1907 aa16.25■□□□□ 0.19
CLDND1-224ENST00000511667 COL9A1P20849 921 aa16.25■□□□□ 0.19
CLDND1-224ENST00000511667 GCLCP48506 637 aaPredicted RBP16.25■□□□□ 0.19
CLDND1-224ENST00000511667 PABPC4Q13310 644 aaKnown RBP eCLIP16.25■□□□□ 0.19
CLDND1-224ENST00000511667 CERKLQ49MI3 558 aaPredicted RBP16.25■□□□□ 0.19
CLDND1-224ENST00000511667 C12orf60Q5U649 245 aa16.25■□□□□ 0.19
CLDND1-224ENST00000511667 TSHZ3Q63HK5 1081 aa16.25■□□□□ 0.19
CLDND1-224ENST00000511667 NECAB2Q7Z6G3 386 aa16.25■□□□□ 0.19
CLDND1-224ENST00000511667 C7orf61Q8IZ16 206 aa16.25■□□□□ 0.19
CLDND1-224ENST00000511667 STRBPQ96SI9 672 aaKnown RBP16.25■□□□□ 0.19
CLDND1-224ENST00000511667 KIAA1683Q9H0B3 1180 aa16.25■□□□□ 0.19
CLDND1-224ENST00000511667 MCM9Q9NXL9 1143 aa16.25■□□□□ 0.19
CLDND1-224ENST00000511667 ZMYND8Q9ULU4 1186 aaPredicted RBP16.25■□□□□ 0.19
CLDND1-224ENST00000511667 CYP2D6P10635 497 aa16.24■□□□□ 0.19
CLDND1-224ENST00000511667 PRKCZQ05513 592 aa16.24■□□□□ 0.19
CLDND1-224ENST00000511667 OSBP2Q969R2 916 aa16.24■□□□□ 0.19
CLDND1-224ENST00000511667 GPATCH3Q96I76 525 aa16.24■□□□□ 0.19
CLDND1-224ENST00000511667 PAWRQ96IZ0 340 aaKnown RBP16.24■□□□□ 0.19
CLDND1-224ENST00000511667 YTHDC1Q96MU7 727 aaKnown RBP16.24■□□□□ 0.19
CLDND1-224ENST00000511667 TRIM34Q9BYJ4 488 aa16.24■□□□□ 0.19
CLDND1-224ENST00000511667 SPTBN5Q9NRC6 3674 aaKnown RBP16.24■□□□□ 0.19
CLDND1-224ENST00000511667 SMIM22K7EJ46 135 aa16.23■□□□□ 0.19
CLDND1-224ENST00000511667 POLR3DP05423 398 aaPredicted RBP16.23■□□□□ 0.19
CLDND1-224ENST00000511667 FCGRTP55899 365 aa16.23■□□□□ 0.19
CLDND1-224ENST00000511667 IRF5Q13568 498 aa16.23■□□□□ 0.19
CLDND1-224ENST00000511667 ABCB5Q2M3G0 1257 aa16.23■□□□□ 0.19
CLDND1-224ENST00000511667 GIMAP6Q6P9H5 292 aa16.23■□□□□ 0.19
CLDND1-224ENST00000511667 USP17L2Q6R6M4 530 aa16.23■□□□□ 0.19
CLDND1-224ENST00000511667 SIAH1Q8IUQ4 282 aa16.23■□□□□ 0.19
CLDND1-224ENST00000511667 SMC5Q8IY18 1101 aa16.23■□□□□ 0.19
CLDND1-224ENST00000511667 APPBP2Q92624 585 aa16.23■□□□□ 0.19
CLDND1-224ENST00000511667 SWAP70Q9UH65 585 aa16.23■□□□□ 0.19
CLDND1-224ENST00000511667 GREB1LQ9C091 1923 aaPredicted RBP16.23■□□□□ 0.19
CLDND1-224ENST00000511667 RLFQ13129 1914 aa16.22■□□□□ 0.19
CLDND1-224ENST00000511667 GSG1L2A8MUP6 293 aa16.22■□□□□ 0.19
CLDND1-224ENST00000511667 RNF113AO15541 343 aaKnown RBP16.22■□□□□ 0.19
CLDND1-224ENST00000511667 GLRX3O76003 335 aaKnown RBP16.22■□□□□ 0.19
CLDND1-224ENST00000511667 ZFYP08048 801 aaPredicted RBP16.22■□□□□ 0.19
CLDND1-224ENST00000511667 MAGEA10P43363 369 aaPredicted RBP16.22■□□□□ 0.19
CLDND1-224ENST00000511667 SBK1Q52WX2 424 aa16.22■□□□□ 0.19
CLDND1-224ENST00000511667 FAM109BQ6ICB4 259 aaPredicted RBP16.22■□□□□ 0.19
CLDND1-224ENST00000511667 CTR9Q6PD62 1173 aa16.22■□□□□ 0.19
CLDND1-224ENST00000511667 LBX2Q6XYB7 198 aa16.22■□□□□ 0.19
CLDND1-224ENST00000511667 C16orf86Q6ZW13 317 aa16.22■□□□□ 0.19
CLDND1-224ENST00000511667 SLC44A5Q8NCS7 719 aa16.22■□□□□ 0.19
CLDND1-224ENST00000511667 ACER1Q8TDN7 264 aa16.22■□□□□ 0.19
CLDND1-224ENST00000511667 SMCR8Q8TEV9 937 aaPredicted RBP16.22■□□□□ 0.19
CLDND1-224ENST00000511667 GUCD1Q96NT3 240 aa16.22■□□□□ 0.19
CLDND1-224ENST00000511667 DEFB118Q96PH6 123 aa16.22■□□□□ 0.19
CLDND1-224ENST00000511667 P2RX7Q99572 595 aaKnown RBP16.22■□□□□ 0.19
CLDND1-224ENST00000511667 UBE2OQ9C0C9 1292 aaKnown RBP16.22■□□□□ 0.19
CLDND1-224ENST00000511667 ROBO3Q96MS0 1386 aa16.22■□□□□ 0.19
CLDND1-224ENST00000511667 PLXNB2O15031 1838 aa16.22■□□□□ 0.19
CLDND1-224ENST00000511667 A0A1W2PRG0 241 aa16.21■□□□□ 0.19
CLDND1-224ENST00000511667 USP17L12C9JPN9 530 aa16.21■□□□□ 0.19
CLDND1-224ENST00000511667 USP17L21D6R901 530 aa16.21■□□□□ 0.19
CLDND1-224ENST00000511667 MX1P20591 662 aa16.21■□□□□ 0.19
CLDND1-224ENST00000511667 HERVK_113P62684 666 aa16.21■□□□□ 0.19
CLDND1-224ENST00000511667 ANKRD13CQ8N6S4 541 aa16.21■□□□□ 0.19
CLDND1-224ENST00000511667 DYNLL2Q96FJ2 89 aa16.21■□□□□ 0.19
CLDND1-224ENST00000511667 TMOD4Q9NZQ9 345 aa16.21■□□□□ 0.19
CLDND1-224ENST00000511667 RBPJLQ9UBG7 517 aa16.21■□□□□ 0.19
CLDND1-224ENST00000511667 GJD2Q9UKL4 321 aa16.21■□□□□ 0.19
CLDND1-224ENST00000511667 GABRQQ9UN88 632 aa16.21■□□□□ 0.19
CLDND1-224ENST00000511667 CYP2D7A0A087X1C5 515 aa16.2■□□□□ 0.18
CLDND1-224ENST00000511667 ERC2O15083 957 aa16.2■□□□□ 0.18
CLDND1-224ENST00000511667 ADCY3O60266 1144 aa16.2■□□□□ 0.18
CLDND1-224ENST00000511667 INHAP05111 366 aa16.2■□□□□ 0.18
CLDND1-224ENST00000511667 USP14P54578 494 aa16.2■□□□□ 0.18
CLDND1-224ENST00000511667 SEPT2Q15019 361 aa16.2■□□□□ 0.18
CLDND1-224ENST00000511667 TICAM2Q86XR7 235 aa16.2■□□□□ 0.18
CLDND1-224ENST00000511667 PXYLP1Q8TE99 480 aa16.2■□□□□ 0.18
CLDND1-224ENST00000511667 SYMPKQ92797 1274 aaKnown RBP16.2■□□□□ 0.18
CLDND1-224ENST00000511667 CCDC17Q96LX7 622 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms