RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 MTMR10Q9NXD2 777 aa12.71□□□□□ -0.37
DDX41-211ENST00000510171 SERPINB13Q9UIV8 391 aa12.71□□□□□ -0.37
DDX41-211ENST00000510171 STXBP5LQ9Y2K9 1186 aa12.71□□□□□ -0.37
DDX41-211ENST00000510171 PHIPQ8WWQ0 1821 aa12.71□□□□□ -0.38
DDX41-211ENST00000510171 SZT2Q5T011 3432 aa12.71□□□□□ -0.38
DDX41-211ENST00000510171 SLC15A5A6NIM6 579 aa12.7□□□□□ -0.38
DDX41-211ENST00000510171 CNMDO75829 334 aa12.7□□□□□ -0.38
DDX41-211ENST00000510171 PTPREP23469 700 aa12.7□□□□□ -0.38
DDX41-211ENST00000510171 ATP2B2Q01814 1243 aa12.7□□□□□ -0.38
DDX41-211ENST00000510171 CERKLQ49MI3 558 aaPredicted RBP12.7□□□□□ -0.38
DDX41-211ENST00000510171 WDR78Q5VTH9 848 aa12.7□□□□□ -0.38
DDX41-211ENST00000510171 ZKSCAN2Q63HK3 967 aa12.7□□□□□ -0.38
DDX41-211ENST00000510171 TTC6Q86TZ1 520 aa12.7□□□□□ -0.38
DDX41-211ENST00000510171 KIAA1683Q9H0B3 1180 aa12.7□□□□□ -0.38
DDX41-211ENST00000510171 CCDC8Q9H0W5 538 aaPredicted RBP12.7□□□□□ -0.38
DDX41-211ENST00000510171 CABP5Q9NP86 173 aa12.7□□□□□ -0.38
DDX41-211ENST00000510171 DBNLQ9UJU6 430 aaKnown RBP12.7□□□□□ -0.38
DDX41-211ENST00000510171 NOP58Q9Y2X3 529 aaKnown RBP12.7□□□□□ -0.38
DDX41-211ENST00000510171 NDUFB9Q9Y6M9 179 aa12.7□□□□□ -0.38
DDX41-211ENST00000510171 MDM2Q00987 491 aaPredicted RBP12.69□□□□□ -0.38
DDX41-211ENST00000510171 MAP3K12Q12852 859 aa12.69□□□□□ -0.38
DDX41-211ENST00000510171 ABCB5Q2M3G0 1257 aa12.69□□□□□ -0.38
DDX41-211ENST00000510171 MAGEB6Q8N7X4 407 aa12.69□□□□□ -0.38
DDX41-211ENST00000510171 ACER1Q8TDN7 264 aa12.69□□□□□ -0.38
DDX41-211ENST00000510171 SENP6Q9GZR1 1112 aaPredicted RBP12.69□□□□□ -0.38
DDX41-211ENST00000510171 EHD4Q9H223 541 aa12.69□□□□□ -0.38
DDX41-211ENST00000510171 DDX20Q9UHI6 824 aaKnown RBP12.69□□□□□ -0.38
DDX41-211ENST00000510171 IVNS1ABPQ9Y6Y0 642 aa12.69□□□□□ -0.38
DDX41-211ENST00000510171 MSCO60682 206 aa12.68□□□□□ -0.38
DDX41-211ENST00000510171 VCAM1P19320 739 aa12.68□□□□□ -0.38
DDX41-211ENST00000510171 CNGA1P29973 690 aa12.68□□□□□ -0.38
DDX41-211ENST00000510171 TMED8Q6PL24 325 aaPredicted RBP12.68□□□□□ -0.38
DDX41-211ENST00000510171 EAF2Q96CJ1 260 aaPredicted RBP12.68□□□□□ -0.38
DDX41-211ENST00000510171 LBHD1Q9BQE6 289 aaPredicted RBP12.68□□□□□ -0.38
DDX41-211ENST00000510171 C1orf115Q9H7X2 142 aa12.68□□□□□ -0.38
DDX41-211ENST00000510171 TLR7Q9NYK1 1049 aaKnown RBP12.68□□□□□ -0.38
DDX41-211ENST00000510171 FLRT1Q9NZU1 646 aa12.68□□□□□ -0.38
DDX41-211ENST00000510171 BTBD7Q9P203 1132 aa12.68□□□□□ -0.38
DDX41-211ENST00000510171 LOC285556D6RIA3 1793 aa12.68□□□□□ -0.38
DDX41-211ENST00000510171 PTPRFP10586 1907 aa12.68□□□□□ -0.38
DDX41-211ENST00000510171 HOXC6P09630 235 aa12.67□□□□□ -0.38
DDX41-211ENST00000510171 PLCD1P51178 756 aa12.67□□□□□ -0.38
DDX41-211ENST00000510171 GRB14Q14449 540 aa12.67□□□□□ -0.38
DDX41-211ENST00000510171 LBX2Q6XYB7 198 aa12.67□□□□□ -0.38
DDX41-211ENST00000510171 NPLOC4Q8TAT6 608 aa12.67□□□□□ -0.38
DDX41-211ENST00000510171 LPAR1Q92633 364 aa12.67□□□□□ -0.38
DDX41-211ENST00000510171 RPAP3Q9H6T3 665 aaPredicted RBP12.67□□□□□ -0.38
DDX41-211ENST00000510171 ANTXR1Q9H6X2 564 aa12.67□□□□□ -0.38
DDX41-211ENST00000510171 DNM1LO00429 736 aa12.66□□□□□ -0.38
DDX41-211ENST00000510171 POLR3DP05423 398 aaPredicted RBP12.66□□□□□ -0.38
DDX41-211ENST00000510171 CYP2C19P33261 490 aa12.66□□□□□ -0.38
DDX41-211ENST00000510171 SHMT1P34896 483 aa12.66□□□□□ -0.38
DDX41-211ENST00000510171 ATN1P54259 1190 aaPredicted RBP12.66□□□□□ -0.38
DDX41-211ENST00000510171 COG2Q14746 738 aa12.66□□□□□ -0.38
DDX41-211ENST00000510171 DIEXFQ68CQ4 756 aaKnown RBP12.66□□□□□ -0.38
DDX41-211ENST00000510171 DPP9Q86TI2 863 aa12.66□□□□□ -0.38
DDX41-211ENST00000510171 FTSJ3Q8IY81 847 aaKnown RBP12.66□□□□□ -0.38
DDX41-211ENST00000510171 HOXC10Q9NYD6 342 aa12.66□□□□□ -0.38
DDX41-211ENST00000510171 PRKAG2Q9UGJ0 569 aa12.66□□□□□ -0.38
DDX41-211ENST00000510171 DOCK3Q8IZD9 2030 aa12.66□□□□□ -0.38
DDX41-211ENST00000510171 MAGEB6P1A0A0J9YX57 407 aa12.65□□□□□ -0.38
DDX41-211ENST00000510171 SPDYE16A6NNV3 312 aaPredicted RBP12.65□□□□□ -0.38
DDX41-211ENST00000510171 POTEB2H3BUK9 544 aa12.65□□□□□ -0.38
DDX41-211ENST00000510171 STRNO43815 780 aa12.65□□□□□ -0.38
DDX41-211ENST00000510171 GUCY1A2P33402 732 aa12.65□□□□□ -0.38
DDX41-211ENST00000510171 FAM109BQ6ICB4 259 aaPredicted RBP12.65□□□□□ -0.38
DDX41-211ENST00000510171 ITPRIPQ8IWB1 547 aa12.65□□□□□ -0.38
DDX41-211ENST00000510171 ARRDC4Q8NCT1 418 aa12.65□□□□□ -0.38
DDX41-211ENST00000510171 MPHOSPH10O00566 681 aaKnown RBP12.64□□□□□ -0.39
DDX41-211ENST00000510171 GABPAQ06546 454 aa12.64□□□□□ -0.39
DDX41-211ENST00000510171 SEPT2Q15019 361 aa12.64□□□□□ -0.39
DDX41-211ENST00000510171 TTF1Q15361 905 aaPredicted RBP12.64□□□□□ -0.39
DDX41-211ENST00000510171 AACSQ86V21 672 aa12.64□□□□□ -0.39
DDX41-211ENST00000510171 ERC1Q8IUD2 1116 aa12.64□□□□□ -0.39
DDX41-211ENST00000510171 MIER1Q8N108 512 aa12.64□□□□□ -0.39
DDX41-211ENST00000510171 TRPV1Q8NER1 839 aa12.64□□□□□ -0.39
DDX41-211ENST00000510171 RIOK1Q9BRS2 568 aaKnown RBP12.64□□□□□ -0.39
DDX41-211ENST00000510171 MOV10L1Q9BXT6 1211 aaKnown RBP12.64□□□□□ -0.39
DDX41-211ENST00000510171 A0A1W2PRG0 241 aa12.63□□□□□ -0.39
DDX41-211ENST00000510171 IGHA2P01877 340 aa12.63□□□□□ -0.39
DDX41-211ENST00000510171 CYBAP13498 195 aa12.63□□□□□ -0.39
DDX41-211ENST00000510171 ADORA2AP29274 412 aa12.63□□□□□ -0.39
DDX41-211ENST00000510171 RTP1P59025 263 aa12.63□□□□□ -0.39
DDX41-211ENST00000510171 HNRNPUQ00839 825 aaKnown RBP eCLIP12.63□□□□□ -0.39
DDX41-211ENST00000510171 GJC2Q5T442 439 aaPredicted RBP12.63□□□□□ -0.39
DDX41-211ENST00000510171 SLC9C2Q5TAH2 1124 aa12.63□□□□□ -0.39
DDX41-211ENST00000510171 OLFML2BQ68BL8 750 aa12.63□□□□□ -0.39
DDX41-211ENST00000510171 CRNKL1Q9BZJ0 848 aaKnown RBP12.63□□□□□ -0.39
DDX41-211ENST00000510171 TANGO6Q9C0B7 1094 aa12.63□□□□□ -0.39
DDX41-211ENST00000510171 SPATC1LQ9H0A9 340 aa12.63□□□□□ -0.39
DDX41-211ENST00000510171 MCM9Q9NXL9 1143 aa12.63□□□□□ -0.39
DDX41-211ENST00000510171 SLC5A4Q9NY91 659 aa12.63□□□□□ -0.39
DDX41-211ENST00000510171 DDX60LQ5H9U9 1706 aaKnown RBP12.62□□□□□ -0.39
DDX41-211ENST00000510171 KBTBD13C9JR72 458 aa12.62□□□□□ -0.39
DDX41-211ENST00000510171 COBLO75128 1261 aa12.62□□□□□ -0.39
DDX41-211ENST00000510171 ERCC3P19447 782 aa12.62□□□□□ -0.39
DDX41-211ENST00000510171 HSP90AB4PQ58FF6 505 aa12.62□□□□□ -0.39
DDX41-211ENST00000510171 CEP85Q6P2H3 762 aa12.62□□□□□ -0.39
DDX41-211ENST00000510171 SLC39A5Q6ZMH5 540 aa12.62□□□□□ -0.39
DDX41-211ENST00000510171 MB21D1Q8N884 522 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms