RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 ABCB5Q2M3G0 1257 aa18.04■□□□□ 0.48
SMAD5-206ENST00000509962 HSP90AB4PQ58FF6 505 aa18.04■□□□□ 0.48
SMAD5-206ENST00000509962 MAP3K21Q5TCX8 1036 aa18.04■□□□□ 0.48
SMAD5-206ENST00000509962 C7orf61Q8IZ16 206 aa18.04■□□□□ 0.48
SMAD5-206ENST00000509962 PORCNQ9H237 461 aa18.04■□□□□ 0.48
SMAD5-206ENST00000509962 RABGAP1Q9Y3P9 1069 aa18.04■□□□□ 0.48
SMAD5-206ENST00000509962 PLXNB2O15031 1838 aa18.04■□□□□ 0.48
SMAD5-206ENST00000509962 POLR3DP05423 398 aaPredicted RBP18.03■□□□□ 0.48
SMAD5-206ENST00000509962 CACNB2Q08289 660 aaPredicted RBP18.03■□□□□ 0.48
SMAD5-206ENST00000509962 MORN1Q5T089 497 aa18.03■□□□□ 0.48
SMAD5-206ENST00000509962 CATSPERGQ6ZRH7 1159 aa18.03■□□□□ 0.48
SMAD5-206ENST00000509962 USP6NLQ92738 828 aa18.03■□□□□ 0.48
SMAD5-206ENST00000509962 C12orf42Q96LP6 360 aa18.03■□□□□ 0.48
SMAD5-206ENST00000509962 MAGEB6P1A0A0J9YX57 407 aa18.02■□□□□ 0.48
SMAD5-206ENST00000509962 MNX1P50219 401 aaPredicted RBP18.02■□□□□ 0.48
SMAD5-206ENST00000509962 PLCD1P51178 756 aa18.02■□□□□ 0.48
SMAD5-206ENST00000509962 EDC3Q96F86 508 aaKnown RBP18.02■□□□□ 0.48
SMAD5-206ENST00000509962 KIAA1683Q9H0B3 1180 aa18.02■□□□□ 0.48
SMAD5-206ENST00000509962 ZMYND8Q9ULU4 1186 aaPredicted RBP18.02■□□□□ 0.48
SMAD5-206ENST00000509962 BMP8BP34820 402 aa18.01■□□□□ 0.47
SMAD5-206ENST00000509962 CCL14Q16627 93 aa18.01■□□□□ 0.47
SMAD5-206ENST00000509962 SLC9C2Q5TAH2 1124 aa18.01■□□□□ 0.47
SMAD5-206ENST00000509962 WDR78Q5VTH9 848 aa18.01■□□□□ 0.47
SMAD5-206ENST00000509962 POTEEQ6S8J3 1075 aa18.01■□□□□ 0.47
SMAD5-206ENST00000509962 RHPN1Q8TCX5 695 aa18.01■□□□□ 0.47
SMAD5-206ENST00000509962 PANK1Q8TE04 598 aa18.01■□□□□ 0.47
SMAD5-206ENST00000509962 IL1RAPL2Q9NP60 686 aa18.01■□□□□ 0.47
SMAD5-206ENST00000509962 MS4A1P11836 297 aa18■□□□□ 0.47
SMAD5-206ENST00000509962 MAP2K5Q13163 448 aa18■□□□□ 0.47
SMAD5-206ENST00000509962 CLASRPQ8N2M8 674 aaKnown RBP18■□□□□ 0.47
SMAD5-206ENST00000509962 ACER1Q8TDN7 264 aa18■□□□□ 0.47
SMAD5-206ENST00000509962 APBA2Q99767 749 aa18■□□□□ 0.47
SMAD5-206ENST00000509962 GDF15Q99988 308 aa18■□□□□ 0.47
SMAD5-206ENST00000509962 RIOK1Q9BRS2 568 aaKnown RBP18■□□□□ 0.47
SMAD5-206ENST00000509962 CRNKL1Q9BZJ0 848 aaKnown RBP18■□□□□ 0.47
SMAD5-206ENST00000509962 IVNS1ABPQ9Y6Y0 642 aa18■□□□□ 0.47
SMAD5-206ENST00000509962 ALPK3Q96L96 1907 aa18■□□□□ 0.47
SMAD5-206ENST00000509962 APBB1O00213 710 aa17.99■□□□□ 0.47
SMAD5-206ENST00000509962 SYN1P17600 705 aa17.99■□□□□ 0.47
SMAD5-206ENST00000509962 VCAM1P19320 739 aa17.99■□□□□ 0.47
SMAD5-206ENST00000509962 CCND3P30281 292 aaPredicted RBP17.99■□□□□ 0.47
SMAD5-206ENST00000509962 SHMT1P34896 483 aa17.99■□□□□ 0.47
SMAD5-206ENST00000509962 MFSD14CQ5VZR4 134 aa17.99■□□□□ 0.47
SMAD5-206ENST00000509962 MIER1Q8N108 512 aa17.99■□□□□ 0.47
SMAD5-206ENST00000509962 BCL11AQ9H165 835 aa17.99■□□□□ 0.47
SMAD5-206ENST00000509962 MCM9Q9NXL9 1143 aa17.99■□□□□ 0.47
SMAD5-206ENST00000509962 DDX60LQ5H9U9 1706 aaKnown RBP17.98■□□□□ 0.47
SMAD5-206ENST00000509962 SLC15A5A6NIM6 579 aa17.98■□□□□ 0.47
SMAD5-206ENST00000509962 MPHOSPH10O00566 681 aaKnown RBP17.98■□□□□ 0.47
SMAD5-206ENST00000509962 CNMDO75829 334 aa17.98■□□□□ 0.47
SMAD5-206ENST00000509962 IFIT2P09913 472 aaKnown RBP17.98■□□□□ 0.47
SMAD5-206ENST00000509962 PTPREP23469 700 aa17.98■□□□□ 0.47
SMAD5-206ENST00000509962 ATP2B2Q01814 1243 aa17.98■□□□□ 0.47
SMAD5-206ENST00000509962 LHX8Q68G74 356 aa17.98■□□□□ 0.47
SMAD5-206ENST00000509962 RPAP2Q8IXW5 612 aaPredicted RBP17.98■□□□□ 0.47
SMAD5-206ENST00000509962 RPAP3Q9H6T3 665 aaPredicted RBP17.98■□□□□ 0.47
SMAD5-206ENST00000509962 HOXC10Q9NYD6 342 aa17.98■□□□□ 0.47
SMAD5-206ENST00000509962 SOX1O00570 391 aaPredicted RBP17.97■□□□□ 0.47
SMAD5-206ENST00000509962 PDE6AP16499 860 aa17.97■□□□□ 0.47
SMAD5-206ENST00000509962 COG2Q14746 738 aa17.97■□□□□ 0.47
SMAD5-206ENST00000509962 SEPT2Q15019 361 aa17.97■□□□□ 0.47
SMAD5-206ENST00000509962 LBX2Q6XYB7 198 aa17.97■□□□□ 0.47
SMAD5-206ENST00000509962 KIF1BPQ96EK5 621 aa17.97■□□□□ 0.47
SMAD5-206ENST00000509962 LRCH3Q96II8 777 aa17.97■□□□□ 0.47
SMAD5-206ENST00000509962 DNAJC2Q99543 621 aaKnown RBP17.97■□□□□ 0.47
SMAD5-206ENST00000509962 BTBD7Q9P203 1132 aa17.97■□□□□ 0.47
SMAD5-206ENST00000509962 ZNF532Q9HCE3 1301 aa17.97■□□□□ 0.47
SMAD5-206ENST00000509962 GOLIM4O00461 696 aa17.96■□□□□ 0.47
SMAD5-206ENST00000509962 HMMRO75330 724 aa17.96■□□□□ 0.47
SMAD5-206ENST00000509962 CNGA1P29973 690 aa17.96■□□□□ 0.47
SMAD5-206ENST00000509962 GUCY1A2P33402 732 aa17.96■□□□□ 0.47
SMAD5-206ENST00000509962 GABPAQ06546 454 aa17.96■□□□□ 0.47
SMAD5-206ENST00000509962 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.96■□□□□ 0.47
SMAD5-206ENST00000509962 PFASO15067 1338 aa17.96■□□□□ 0.46
SMAD5-206ENST00000509962 SPDYE16A6NNV3 312 aaPredicted RBP17.95■□□□□ 0.46
SMAD5-206ENST00000509962 COL6A1P12109 1028 aa17.95■□□□□ 0.46
SMAD5-206ENST00000509962 MAGEA10P43363 369 aaPredicted RBP17.95■□□□□ 0.46
SMAD5-206ENST00000509962 DPP9Q86TI2 863 aa17.95■□□□□ 0.46
SMAD5-206ENST00000509962 SDR42E1Q8WUS8 393 aa17.95■□□□□ 0.46
SMAD5-206ENST00000509962 UBE2OQ9C0C9 1292 aaKnown RBP17.95■□□□□ 0.46
SMAD5-206ENST00000509962 STRNO43815 780 aa17.94■□□□□ 0.46
SMAD5-206ENST00000509962 RAB11FIP3O75154 756 aa17.94■□□□□ 0.46
SMAD5-206ENST00000509962 SLC17A8Q8NDX2 589 aa17.94■□□□□ 0.46
SMAD5-206ENST00000509962 TANGO6Q9C0B7 1094 aa17.94■□□□□ 0.46
SMAD5-206ENST00000509962 DCP1AQ9NPI6 582 aaPredicted RBP17.94■□□□□ 0.46
SMAD5-206ENST00000509962 FLRT1Q9NZU1 646 aa17.94■□□□□ 0.46
SMAD5-206ENST00000509962 RANBP2P49792 3224 aaKnown RBP17.94■□□□□ 0.46
SMAD5-206ENST00000509962 A0A1W2PRG0 241 aa17.93■□□□□ 0.46
SMAD5-206ENST00000509962 MSCO60682 206 aa17.93■□□□□ 0.46
SMAD5-206ENST00000509962 HOXC6P09630 235 aa17.93■□□□□ 0.46
SMAD5-206ENST00000509962 GRB14Q14449 540 aa17.93■□□□□ 0.46
SMAD5-206ENST00000509962 LRRC26Q2I0M4 334 aa17.93■□□□□ 0.46
SMAD5-206ENST00000509962 TDHQ8IZJ6 230 aa17.93■□□□□ 0.46
SMAD5-206ENST00000509962 LCORLQ8N3X6 602 aa17.93■□□□□ 0.46
SMAD5-206ENST00000509962 NPLOC4Q8TAT6 608 aa17.93■□□□□ 0.46
SMAD5-206ENST00000509962 SENP6Q9GZR1 1112 aaPredicted RBP17.93■□□□□ 0.46
SMAD5-206ENST00000509962 SWAP70Q9UH65 585 aa17.93■□□□□ 0.46
SMAD5-206ENST00000509962 DDX20Q9UHI6 824 aaKnown RBP17.93■□□□□ 0.46
SMAD5-206ENST00000509962 DDX19BQ9UMR2 479 aa17.93■□□□□ 0.46
SMAD5-206ENST00000509962 TCRBV5S4A2TA0A5A2 114 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms