RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 MIER1Q8N108 512 aa19.43■□□□□ 0.7
RAB40C-202ENST00000509637 EDC3Q96F86 508 aaKnown RBP19.43■□□□□ 0.7
RAB40C-202ENST00000509637 C11orf49Q9H6J7 331 aa19.43■□□□□ 0.7
RAB40C-202ENST00000509637 CHGBP05060 677 aa19.42■□□□□ 0.7
RAB40C-202ENST00000509637 HLA-DOAP06340 250 aa19.42■□□□□ 0.7
RAB40C-202ENST00000509637 MAPK4P31152 587 aa19.42■□□□□ 0.7
RAB40C-202ENST00000509637 BMP8BP34820 402 aa19.42■□□□□ 0.7
RAB40C-202ENST00000509637 USP5P45974 858 aa19.42■□□□□ 0.7
RAB40C-202ENST00000509637 PLEKHH3Q7Z736 793 aa19.42■□□□□ 0.7
RAB40C-202ENST00000509637 AACSQ86V21 672 aa19.42■□□□□ 0.7
RAB40C-202ENST00000509637 SIRT2Q8IXJ6 389 aa19.42■□□□□ 0.7
RAB40C-202ENST00000509637 NPLOC4Q8TAT6 608 aa19.42■□□□□ 0.7
RAB40C-202ENST00000509637 EHD4Q9H223 541 aa19.42■□□□□ 0.7
RAB40C-202ENST00000509637 SERPINB13Q9UIV8 391 aa19.42■□□□□ 0.7
RAB40C-202ENST00000509637 A0A1W2PPC1 479 aa19.41■□□□□ 0.7
RAB40C-202ENST00000509637 CYP2D6P10635 497 aa19.41■□□□□ 0.7
RAB40C-202ENST00000509637 VCAM1P19320 739 aa19.41■□□□□ 0.7
RAB40C-202ENST00000509637 MAGEA10P43363 369 aaPredicted RBP19.41■□□□□ 0.7
RAB40C-202ENST00000509637 HNRNPUQ00839 825 aaKnown RBP eCLIP19.41■□□□□ 0.7
RAB40C-202ENST00000509637 SEPT2Q15019 361 aa19.41■□□□□ 0.7
RAB40C-202ENST00000509637 LRRC26Q2I0M4 334 aa19.41■□□□□ 0.7
RAB40C-202ENST00000509637 SIAH1Q8IUQ4 282 aa19.41■□□□□ 0.7
RAB40C-202ENST00000509637 TRPV1Q8NER1 839 aa19.41■□□□□ 0.7
RAB40C-202ENST00000509637 SOCS4Q8WXH5 440 aa19.41■□□□□ 0.7
RAB40C-202ENST00000509637 KIAA1683Q9H0B3 1180 aa19.41■□□□□ 0.7
RAB40C-202ENST00000509637 RABGAP1Q9Y3P9 1069 aa19.41■□□□□ 0.7
RAB40C-202ENST00000509637 RLFQ13129 1914 aa19.41■□□□□ 0.7
RAB40C-202ENST00000509637 TCRBV5S4A2TA0A5A2 114 aa19.4■□□□□ 0.7
RAB40C-202ENST00000509637 USP17L15C9J2P7 530 aa19.4■□□□□ 0.7
RAB40C-202ENST00000509637 USP17L13C9JLJ4 530 aa19.4■□□□□ 0.7
RAB40C-202ENST00000509637 USP17L11C9JVI0 530 aa19.4■□□□□ 0.7
RAB40C-202ENST00000509637 USP17L18D6R9N7 530 aa19.4■□□□□ 0.7
RAB40C-202ENST00000509637 USP17L22D6RA61 530 aa19.4■□□□□ 0.7
RAB40C-202ENST00000509637 USP17L17D6RBQ6 530 aa19.4■□□□□ 0.7
RAB40C-202ENST00000509637 USP17L19D6RCP7 530 aa19.4■□□□□ 0.7
RAB40C-202ENST00000509637 USP17L20D6RJB6 530 aa19.4■□□□□ 0.7
RAB40C-202ENST00000509637 IGSF3O75054 1194 aa19.4■□□□□ 0.7
RAB40C-202ENST00000509637 USP17L24Q0WX57 530 aa19.4■□□□□ 0.7
RAB40C-202ENST00000509637 MAP2K5Q13163 448 aa19.4■□□□□ 0.7
RAB40C-202ENST00000509637 RAB3GAP1Q15042 981 aa19.4■□□□□ 0.7
RAB40C-202ENST00000509637 ABCB5Q2M3G0 1257 aa19.4■□□□□ 0.7
RAB40C-202ENST00000509637 CERKLQ49MI3 558 aaPredicted RBP19.4■□□□□ 0.7
RAB40C-202ENST00000509637 SLC44A5Q8NCS7 719 aa19.4■□□□□ 0.7
RAB40C-202ENST00000509637 TRIM34Q9BYJ4 488 aa19.4■□□□□ 0.7
RAB40C-202ENST00000509637 SPDYE16A6NNV3 312 aaPredicted RBP19.39■□□□□ 0.69
RAB40C-202ENST00000509637 PDE6AP16499 860 aa19.39■□□□□ 0.69
RAB40C-202ENST00000509637 ZKSCAN1P17029 563 aaPredicted RBP19.39■□□□□ 0.69
RAB40C-202ENST00000509637 PTPREP23469 700 aa19.39■□□□□ 0.69
RAB40C-202ENST00000509637 FTSJ3Q8IY81 847 aaKnown RBP19.39■□□□□ 0.69
RAB40C-202ENST00000509637 RHPN1Q8TCX5 695 aa19.39■□□□□ 0.69
RAB40C-202ENST00000509637 RGS2P41220 211 aa19.38■□□□□ 0.69
RAB40C-202ENST00000509637 FRMPD3Q5JV73 1810 aa19.38■□□□□ 0.69
RAB40C-202ENST00000509637 LBX2Q6XYB7 198 aa19.38■□□□□ 0.69
RAB40C-202ENST00000509637 Q7L0L9 218 aa19.38■□□□□ 0.69
RAB40C-202ENST00000509637 CLEC10AQ8IUN9 316 aa19.38■□□□□ 0.69
RAB40C-202ENST00000509637 SDR42E1Q8WUS8 393 aa19.38■□□□□ 0.69
RAB40C-202ENST00000509637 APBA2Q99767 749 aa19.38■□□□□ 0.69
RAB40C-202ENST00000509637 RPAP3Q9H6T3 665 aaPredicted RBP19.38■□□□□ 0.69
RAB40C-202ENST00000509637 COL6A3P12111 3177 aa19.38■□□□□ 0.69
RAB40C-202ENST00000509637 PRKAB2O43741 272 aa19.37■□□□□ 0.69
RAB40C-202ENST00000509637 MAP3K12Q12852 859 aa19.37■□□□□ 0.69
RAB40C-202ENST00000509637 TTC6Q86TZ1 520 aa19.37■□□□□ 0.69
RAB40C-202ENST00000509637 LCORLQ8N3X6 602 aa19.37■□□□□ 0.69
RAB40C-202ENST00000509637 DYNLL2Q96FJ2 89 aa19.37■□□□□ 0.69
RAB40C-202ENST00000509637 ZNF532Q9HCE3 1301 aa19.36■□□□□ 0.69
RAB40C-202ENST00000509637 MAGEB6P1A0A0J9YX57 407 aa19.36■□□□□ 0.69
RAB40C-202ENST00000509637 PDE3AQ14432 1141 aa19.36■□□□□ 0.69
RAB40C-202ENST00000509637 FEZ1Q99689 392 aa19.36■□□□□ 0.69
RAB40C-202ENST00000509637 DCP1AQ9NPI6 582 aaPredicted RBP19.36■□□□□ 0.69
RAB40C-202ENST00000509637 SLC15A5A6NIM6 579 aa19.35■□□□□ 0.69
RAB40C-202ENST00000509637 APBB1O00213 710 aa19.35■□□□□ 0.69
RAB40C-202ENST00000509637 HOXC6P09630 235 aa19.35■□□□□ 0.69
RAB40C-202ENST00000509637 CYP2C19P33261 490 aa19.35■□□□□ 0.69
RAB40C-202ENST00000509637 GRB14Q14449 540 aa19.35■□□□□ 0.69
RAB40C-202ENST00000509637 SLC9C2Q5TAH2 1124 aa19.35■□□□□ 0.69
RAB40C-202ENST00000509637 GTF3C2Q8WUA4 911 aaPredicted RBP19.35■□□□□ 0.69
RAB40C-202ENST00000509637 NAV1Q8NEY1 1877 aa19.35■□□□□ 0.69
RAB40C-202ENST00000509637 CYP2D7A0A087X1C5 515 aa19.34■□□□□ 0.69
RAB40C-202ENST00000509637 GOLIM4O00461 696 aa19.34■□□□□ 0.69
RAB40C-202ENST00000509637 COBLO75128 1261 aa19.34■□□□□ 0.69
RAB40C-202ENST00000509637 POLR3DP05423 398 aaPredicted RBP19.34■□□□□ 0.69
RAB40C-202ENST00000509637 TRMT44Q8IYL2 757 aaKnown RBP19.34■□□□□ 0.69
RAB40C-202ENST00000509637 MOV10L1Q9BXT6 1211 aaKnown RBP19.34■□□□□ 0.69
RAB40C-202ENST00000509637 ARMT1Q9H993 441 aa19.34■□□□□ 0.69
RAB40C-202ENST00000509637 USP14P54578 494 aa19.33■□□□□ 0.68
RAB40C-202ENST00000509637 LRIT3Q3SXY7 679 aa19.33■□□□□ 0.68
RAB40C-202ENST00000509637 WDR78Q5VTH9 848 aa19.33■□□□□ 0.68
RAB40C-202ENST00000509637 MCM9Q9NXL9 1143 aa19.33■□□□□ 0.68
RAB40C-202ENST00000509637 AKR1B1P15121 316 aa19.32■□□□□ 0.68
RAB40C-202ENST00000509637 MDM2Q00987 491 aaPredicted RBP19.32■□□□□ 0.68
RAB40C-202ENST00000509637 ERC1Q8IUD2 1116 aa19.32■□□□□ 0.68
RAB40C-202ENST00000509637 CCAR1Q8IX12 1150 aaKnown RBP19.32■□□□□ 0.68
RAB40C-202ENST00000509637 DNAJC2Q99543 621 aaKnown RBP19.32■□□□□ 0.68
RAB40C-202ENST00000509637 CABP5Q9NP86 173 aa19.32■□□□□ 0.68
RAB40C-202ENST00000509637 ZBTB40Q9NUA8 1239 aa19.32■□□□□ 0.68
RAB40C-202ENST00000509637 BAZ2AQ9UIF9 1905 aaKnown RBP19.31■□□□□ 0.68
RAB40C-202ENST00000509637 CYBAP13498 195 aa19.31■□□□□ 0.68
RAB40C-202ENST00000509637 PRAMEF19Q5SWL8 479 aa19.31■□□□□ 0.68
RAB40C-202ENST00000509637 ANO1Q5XXA6 986 aa19.31■□□□□ 0.68
RAB40C-202ENST00000509637 CERS3Q8IU89 383 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms