RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 TMTC3Q6ZXV5 915 aa17.17■□□□□ 0.34
PHF3-209ENST00000509330 DEFB132Q7Z7B7 95 aa17.17■□□□□ 0.34
PHF3-209ENST00000509330 KIAA0825Q8IV33 1275 aa17.17■□□□□ 0.34
PHF3-209ENST00000509330 GPKOWQ92917 476 aaPredicted RBP eCLIP17.17■□□□□ 0.34
PHF3-209ENST00000509330 ZNF165P49910 485 aa17.17■□□□□ 0.34
PHF3-209ENST00000509330 PPP4CP60510 307 aa17.17■□□□□ 0.34
PHF3-209ENST00000509330 FUT2Q10981 343 aa17.17■□□□□ 0.34
PHF3-209ENST00000509330 MAP3K14Q99558 947 aa17.17■□□□□ 0.34
PHF3-209ENST00000509330 RNF26Q9BY78 433 aaPredicted RBP17.17■□□□□ 0.34
PHF3-209ENST00000509330 PTPAQ15257 358 aa17.16■□□□□ 0.34
PHF3-209ENST00000509330 MTA3Q9BTC8 594 aa17.16■□□□□ 0.34
PHF3-209ENST00000509330 COA1Q9GZY4 146 aa17.16■□□□□ 0.34
PHF3-209ENST00000509330 CDK8P49336 464 aa17.16■□□□□ 0.34
PHF3-209ENST00000509330 SHC4Q6S5L8 630 aa17.16■□□□□ 0.34
PHF3-209ENST00000509330 TBC1D22AQ8WUA7 517 aa17.16■□□□□ 0.34
PHF3-209ENST00000509330 CNTNAP5Q8WYK1 1306 aa17.16■□□□□ 0.34
PHF3-209ENST00000509330 WNT7AO00755 349 aa17.16■□□□□ 0.34
PHF3-209ENST00000509330 ZNF202O95125 648 aa17.16■□□□□ 0.34
PHF3-209ENST00000509330 PCP11498 1178 aaKnown RBP17.16■□□□□ 0.34
PHF3-209ENST00000509330 RASA1P20936 1047 aa17.16■□□□□ 0.34
PHF3-209ENST00000509330 EYA3Q99504 573 aa17.16■□□□□ 0.34
PHF3-209ENST00000509330 NID2Q14112 1375 aa17.15■□□□□ 0.34
PHF3-209ENST00000509330 H0YIN7 160 aa17.15■□□□□ 0.34
PHF3-209ENST00000509330 DDAH1O94760 285 aa17.15■□□□□ 0.34
PHF3-209ENST00000509330 RBM5P52756 815 aaKnown RBP eCLIP17.15■□□□□ 0.34
PHF3-209ENST00000509330 FLAD1Q8NFF5 587 aa17.15■□□□□ 0.34
PHF3-209ENST00000509330 DDX4Q9NQI0 724 aaKnown RBP17.15■□□□□ 0.34
PHF3-209ENST00000509330 SLC15A2Q16348 729 aa17.15■□□□□ 0.34
PHF3-209ENST00000509330 RBM28Q9NW13 759 aaKnown RBP17.15■□□□□ 0.34
PHF3-209ENST00000509330 MAST2Q6P0Q8 1798 aa17.15■□□□□ 0.34
PHF3-209ENST00000509330 KIAA1551Q9HCM1 1747 aa17.14■□□□□ 0.33
PHF3-209ENST00000509330 MSNP26038 577 aaKnown RBP17.14■□□□□ 0.33
PHF3-209ENST00000509330 RBM43Q6ZSC3 357 aaKnown RBP17.14■□□□□ 0.33
PHF3-209ENST00000509330 PDILTQ8N807 584 aa17.14■□□□□ 0.33
PHF3-209ENST00000509330 CALM1P0DP23 149 aa17.14■□□□□ 0.33
PHF3-209ENST00000509330 CALM2P0DP24 149 aa17.14■□□□□ 0.33
PHF3-209ENST00000509330 CALM3P0DP25 149 aa17.14■□□□□ 0.33
PHF3-209ENST00000509330 TCP10Q12799 353 aa17.14■□□□□ 0.33
PHF3-209ENST00000509330 RASGRP4Q8TDF6 673 aa17.14■□□□□ 0.33
PHF3-209ENST00000509330 A0A1W2PQ27 194 aa17.13■□□□□ 0.33
PHF3-209ENST00000509330 A0A1W2PQ64 194 aa17.13■□□□□ 0.33
PHF3-209ENST00000509330 A0A1W2PQD8 194 aa17.13■□□□□ 0.33
PHF3-209ENST00000509330 FAM196BA6NMK8 535 aa17.13■□□□□ 0.33
PHF3-209ENST00000509330 PRPF3O43395 683 aaKnown RBP17.13■□□□□ 0.33
PHF3-209ENST00000509330 XBP1P17861 261 aa17.13■□□□□ 0.33
PHF3-209ENST00000509330 HOMER1Q86YM7 354 aa17.13■□□□□ 0.33
PHF3-209ENST00000509330 TMEM47Q9BQJ4 181 aa17.13■□□□□ 0.33
PHF3-209ENST00000509330 USP40Q9NVE5 1235 aa17.13■□□□□ 0.33
PHF3-209ENST00000509330 SYKP43405 635 aa17.13■□□□□ 0.33
PHF3-209ENST00000509330 NLRP5P59047 1200 aa17.13■□□□□ 0.33
PHF3-209ENST00000509330 AOC3Q16853 763 aa17.13■□□□□ 0.33
PHF3-209ENST00000509330 UVSSAQ2YD98 709 aa17.13■□□□□ 0.33
PHF3-209ENST00000509330 VAT1LQ9HCJ6 419 aa17.13■□□□□ 0.33
PHF3-209ENST00000509330 KRT2P35908 639 aa17.13■□□□□ 0.33
PHF3-209ENST00000509330 NFIAQ12857 509 aa17.13■□□□□ 0.33
PHF3-209ENST00000509330 ZSCAN30Q86W11 494 aa17.13■□□□□ 0.33
PHF3-209ENST00000509330 TTC12Q9H892 705 aaPredicted RBP17.13■□□□□ 0.33
PHF3-209ENST00000509330 STK32BQ9NY57 414 aa17.13■□□□□ 0.33
PHF3-209ENST00000509330 FAM205AQ6ZU69 1335 aa17.12■□□□□ 0.33
PHF3-209ENST00000509330 RCAN1P53805 252 aa17.12■□□□□ 0.33
PHF3-209ENST00000509330 TMC4Q7Z404 712 aa17.12■□□□□ 0.33
PHF3-209ENST00000509330 CEP95Q96GE4 821 aa17.12■□□□□ 0.33
PHF3-209ENST00000509330 FOXP1Q9H334 677 aaPredicted RBP17.12■□□□□ 0.33
PHF3-209ENST00000509330 COL11A2P13942 1736 aaPredicted RBP17.12■□□□□ 0.33
PHF3-209ENST00000509330 RAD21O60216 631 aa17.12■□□□□ 0.33
PHF3-209ENST00000509330 ATP2B2Q01814 1243 aa17.12■□□□□ 0.33
PHF3-209ENST00000509330 ZNF174Q15697 407 aa17.12■□□□□ 0.33
PHF3-209ENST00000509330 USP17L2Q6R6M4 530 aa17.12■□□□□ 0.33
PHF3-209ENST00000509330 USP49Q70CQ1 688 aa17.12■□□□□ 0.33
PHF3-209ENST00000509330 SLF2Q8IX21 1173 aa17.12■□□□□ 0.33
PHF3-209ENST00000509330 PHF20Q9BVI0 1012 aa17.12■□□□□ 0.33
PHF3-209ENST00000509330 GAKO14976 1311 aa17.11■□□□□ 0.33
PHF3-209ENST00000509330 LAMB1P07942 1786 aa17.11■□□□□ 0.33
PHF3-209ENST00000509330 FOXN1O15353 648 aa17.11■□□□□ 0.33
PHF3-209ENST00000509330 C21orf2O43822 256 aa17.11■□□□□ 0.33
PHF3-209ENST00000509330 CMA1P23946 247 aa17.11■□□□□ 0.33
PHF3-209ENST00000509330 PIK3AP1Q6ZUJ8 805 aa17.11■□□□□ 0.33
PHF3-209ENST00000509330 JMYQ8N9B5 988 aa17.11■□□□□ 0.33
PHF3-209ENST00000509330 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.11■□□□□ 0.33
PHF3-209ENST00000509330 SCG2P13521 617 aa17.11■□□□□ 0.33
PHF3-209ENST00000509330 PLCG2P16885 1265 aa17.11■□□□□ 0.33
PHF3-209ENST00000509330 PNOCQ13519 176 aa17.11■□□□□ 0.33
PHF3-209ENST00000509330 ZRSR1Q15695 479 aaKnown RBP17.11■□□□□ 0.33
PHF3-209ENST00000509330 DPCR1Q3MIW9 517 aa17.11■□□□□ 0.33
PHF3-209ENST00000509330 ZFPM1Q8IX07 1006 aa17.11■□□□□ 0.33
PHF3-209ENST00000509330 LRRC47Q8N1G4 583 aaKnown RBP17.11■□□□□ 0.33
PHF3-209ENST00000509330 STX1AQ16623 288 aa17.1■□□□□ 0.33
PHF3-209ENST00000509330 SLC35G1Q2M3R5 365 aa17.1■□□□□ 0.33
PHF3-209ENST00000509330 C16orf86Q6ZW13 317 aa17.1■□□□□ 0.33
PHF3-209ENST00000509330 KIF5BP33176 963 aa17.1■□□□□ 0.33
PHF3-209ENST00000509330 RILPL1Q5EBL4 403 aa17.1■□□□□ 0.33
PHF3-209ENST00000509330 HEATR3Q7Z4Q2 680 aa17.1■□□□□ 0.33
PHF3-209ENST00000509330 DGKHQ86XP1 1220 aa17.1■□□□□ 0.33
PHF3-209ENST00000509330 KRI1Q8N9T8 703 aaKnown RBP17.1■□□□□ 0.33
PHF3-209ENST00000509330 CAMKK2Q96RR4 588 aa17.1■□□□□ 0.33
PHF3-209ENST00000509330 TRIM5Q9C035 493 aa17.1■□□□□ 0.33
PHF3-209ENST00000509330 MAD2L2Q9UI95 211 aa17.1■□□□□ 0.33
PHF3-209ENST00000509330 FRMPD2Q68DX3 1309 aaPredicted RBP17.1■□□□□ 0.33
PHF3-209ENST00000509330 BECN2A8MW95 431 aa17.1■□□□□ 0.33
PHF3-209ENST00000509330 MPHOSPH10O00566 681 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms