RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 NKPD1Q17RQ9 610 aa6.98□□□□□ -1.29
NFKB1-208ENST00000509165 DIEXFQ68CQ4 756 aaKnown RBP6.98□□□□□ -1.29
NFKB1-208ENST00000509165 DNAJB8Q8NHS0 232 aa6.98□□□□□ -1.29
NFKB1-208ENST00000509165 XAGE3Q8WTP9 111 aa6.98□□□□□ -1.29
NFKB1-208ENST00000509165 PPP1R13LQ8WUF5 828 aa6.98□□□□□ -1.29
NFKB1-208ENST00000509165 MRRFQ96E11 262 aaKnown RBP6.98□□□□□ -1.29
NFKB1-208ENST00000509165 PRDM5Q9NQX1 630 aaPredicted RBP6.98□□□□□ -1.29
NFKB1-208ENST00000509165 REV1Q9UBZ9 1251 aa6.98□□□□□ -1.29
NFKB1-208ENST00000509165 PRR33A8MZF0 331 aa6.97□□□□□ -1.29
NFKB1-208ENST00000509165 ZNF865P0CJ78 1059 aaPredicted RBP6.97□□□□□ -1.29
NFKB1-208ENST00000509165 SPRED2Q7Z698 418 aa6.97□□□□□ -1.29
NFKB1-208ENST00000509165 METTL16Q86W50 562 aaKnown RBP6.97□□□□□ -1.29
NFKB1-208ENST00000509165 SLFN12Q8IYM2 578 aa6.97□□□□□ -1.29
NFKB1-208ENST00000509165 MISP3Q96FF7 219 aa6.97□□□□□ -1.29
NFKB1-208ENST00000509165 EAF1Q96JC9 268 aaPredicted RBP6.97□□□□□ -1.29
NFKB1-208ENST00000509165 BRMS1Q9HCU9 246 aa6.97□□□□□ -1.29
NFKB1-208ENST00000509165 UBP1Q9NZI7 540 aa6.97□□□□□ -1.29
NFKB1-208ENST00000509165 ANGEL1Q9UNK9 670 aaKnown RBP6.97□□□□□ -1.29
NFKB1-208ENST00000509165 TMEM265A0A087WTH1 108 aa6.96□□□□□ -1.3
NFKB1-208ENST00000509165 SCAMP3O14828 347 aaKnown RBP6.96□□□□□ -1.3
NFKB1-208ENST00000509165 ATE1O95260 518 aa6.96□□□□□ -1.3
NFKB1-208ENST00000509165 ITIH2P19823 946 aa6.96□□□□□ -1.3
NFKB1-208ENST00000509165 RACK1P63244 317 aaKnown RBP6.96□□□□□ -1.3
NFKB1-208ENST00000509165 PRKCQQ04759 706 aa6.96□□□□□ -1.3
NFKB1-208ENST00000509165 BNIP3Q12983 259 aa6.96□□□□□ -1.3
NFKB1-208ENST00000509165 ZNF394Q53GI3 561 aa6.96□□□□□ -1.3
NFKB1-208ENST00000509165 ZNF574Q6ZN55 896 aaPredicted RBP6.96□□□□□ -1.3
NFKB1-208ENST00000509165 CDH24Q86UP0 819 aa6.96□□□□□ -1.3
NFKB1-208ENST00000509165 STK11IPQ8N1F8 1099 aa6.96□□□□□ -1.3
NFKB1-208ENST00000509165 FBXL18Q96ME1 805 aa6.96□□□□□ -1.3
NFKB1-208ENST00000509165 NT5C1AQ9BXI3 368 aa6.96□□□□□ -1.3
NFKB1-208ENST00000509165 VAV3Q9UKW4 847 aa6.96□□□□□ -1.3
NFKB1-208ENST00000509165 SLC5A6Q9Y289 635 aa6.96□□□□□ -1.3
NFKB1-208ENST00000509165 CCDC9Q9Y3X0 531 aaKnown RBP6.96□□□□□ -1.3
NFKB1-208ENST00000509165 SNX11Q9Y5W9 270 aa6.96□□□□□ -1.3
NFKB1-208ENST00000509165 CHURC1-FNTBB4DL54 471 aa6.95□□□□□ -1.3
NFKB1-208ENST00000509165 CWF19L2Q2TBE0 894 aaKnown RBP6.95□□□□□ -1.3
NFKB1-208ENST00000509165 SFRP5Q5T4F7 317 aa6.95□□□□□ -1.3
NFKB1-208ENST00000509165 USP48Q86UV5 1035 aa6.95□□□□□ -1.3
NFKB1-208ENST00000509165 SLITRK4Q8IW52 837 aa6.95□□□□□ -1.3
NFKB1-208ENST00000509165 ABI1Q8IZP0 508 aa6.95□□□□□ -1.3
NFKB1-208ENST00000509165 FAM13CQ8NE31 585 aa6.95□□□□□ -1.3
NFKB1-208ENST00000509165 FLCNQ8NFG4 579 aa6.95□□□□□ -1.3
NFKB1-208ENST00000509165 RNF34Q969K3 372 aa6.95□□□□□ -1.3
NFKB1-208ENST00000509165 TPX2Q9ULW0 747 aaKnown RBP6.95□□□□□ -1.3
NFKB1-208ENST00000509165 PCDHGB7Q9Y5F8 929 aa6.95□□□□□ -1.3
NFKB1-208ENST00000509165 CD8BP10966 210 aa6.94□□□□□ -1.3
NFKB1-208ENST00000509165 CD96P40200 585 aa6.94□□□□□ -1.3
NFKB1-208ENST00000509165 CYB5RLQ6IPT4 315 aa6.94□□□□□ -1.3
NFKB1-208ENST00000509165 ZNF746Q6NUN9 644 aaPredicted RBP6.94□□□□□ -1.3
NFKB1-208ENST00000509165 ARHGAP27Q6ZUM4 889 aa6.94□□□□□ -1.3
NFKB1-208ENST00000509165 KIAA0825Q8IV33 1275 aa6.94□□□□□ -1.3
NFKB1-208ENST00000509165 CYB5D2Q8WUJ1 264 aa6.94□□□□□ -1.3
NFKB1-208ENST00000509165 HRASLS5Q96KN8 279 aa6.94□□□□□ -1.3
NFKB1-208ENST00000509165 SPON2Q9BUD6 331 aa6.94□□□□□ -1.3
NFKB1-208ENST00000509165 EHMT1Q9H9B1 1298 aa6.94□□□□□ -1.3
NFKB1-208ENST00000509165 ADGRE2Q9UHX3 823 aa6.94□□□□□ -1.3
NFKB1-208ENST00000509165 DDX41Q9UJV9 622 aaKnown RBP6.94□□□□□ -1.3
NFKB1-208ENST00000509165 CEP131Q9UPN4 1083 aa6.94□□□□□ -1.3
NFKB1-208ENST00000509165 PCDHB14Q9Y5E9 798 aa6.94□□□□□ -1.3
NFKB1-208ENST00000509165 CAPN6Q9Y6Q1 641 aa6.94□□□□□ -1.3
NFKB1-208ENST00000509165 SLC22A31A6NKX4 558 aa6.93□□□□□ -1.3
NFKB1-208ENST00000509165 GNAT3A8MTJ3 354 aa6.93□□□□□ -1.3
NFKB1-208ENST00000509165 CLCN7P51798 805 aa6.93□□□□□ -1.3
NFKB1-208ENST00000509165 YARSP54577 528 aaKnown RBP6.93□□□□□ -1.3
NFKB1-208ENST00000509165 APOBRQ0VD83 1088 aa6.93□□□□□ -1.3
NFKB1-208ENST00000509165 AOC3Q16853 763 aa6.93□□□□□ -1.3
NFKB1-208ENST00000509165 SEZ6Q53EL9 994 aa6.93□□□□□ -1.3
NFKB1-208ENST00000509165 CBLL1Q75N03 491 aa6.93□□□□□ -1.3
NFKB1-208ENST00000509165 REXO1Q8N1G1 1221 aaKnown RBP6.93□□□□□ -1.3
NFKB1-208ENST00000509165 MFSD4AQ8N468 514 aa6.93□□□□□ -1.3
NFKB1-208ENST00000509165 SEMA3GQ9NS98 782 aa6.93□□□□□ -1.3
NFKB1-208ENST00000509165 ST14Q9Y5Y6 855 aa6.93□□□□□ -1.3
NFKB1-208ENST00000509165 PITPNM2Q9BZ72 1349 aa6.93□□□□□ -1.3
NFKB1-208ENST00000509165 ATAD2BQ9ULI0 1458 aa6.92□□□□□ -1.3
NFKB1-208ENST00000509165 HDLBPQ00341 1268 aaKnown RBP6.92□□□□□ -1.3
NFKB1-208ENST00000509165 CLCQ05315 142 aa6.92□□□□□ -1.3
NFKB1-208ENST00000509165 OGFOD2Q6N063 350 aa6.92□□□□□ -1.3
NFKB1-208ENST00000509165 TP53INP2Q8IXH6 220 aa6.92□□□□□ -1.3
NFKB1-208ENST00000509165 NKD1Q969G9 470 aa6.92□□□□□ -1.3
NFKB1-208ENST00000509165 COX4I2Q96KJ9 171 aa6.92□□□□□ -1.3
NFKB1-208ENST00000509165 Q96M66 194 aa6.92□□□□□ -1.3
NFKB1-208ENST00000509165 KLHL3Q9UH77 587 aa6.92□□□□□ -1.3
NFKB1-208ENST00000509165 LAMC3Q9Y6N6 1575 aa6.91□□□□□ -1.3
NFKB1-208ENST00000509165 FUT4P22083 530 aa6.91□□□□□ -1.3
NFKB1-208ENST00000509165 ETV3P41162 512 aa6.91□□□□□ -1.3
NFKB1-208ENST00000509165 KIR3DL1P43629 444 aa6.91□□□□□ -1.3
NFKB1-208ENST00000509165 TNK2Q07912 1038 aa6.91□□□□□ -1.3
NFKB1-208ENST00000509165 AGBL5Q8NDL9 886 aa6.91□□□□□ -1.3
NFKB1-208ENST00000509165 BAHD1Q8TBE0 780 aaPredicted RBP6.91□□□□□ -1.3
NFKB1-208ENST00000509165 HSPA12BQ96MM6 686 aa6.91□□□□□ -1.3
NFKB1-208ENST00000509165 WDR62O43379 1518 aa6.91□□□□□ -1.3
NFKB1-208ENST00000509165 CBX7O95931 251 aa6.9□□□□□ -1.3
NFKB1-208ENST00000509165 C8AP07357 584 aa6.9□□□□□ -1.3
NFKB1-208ENST00000509165 CYP7A1P22680 504 aa6.9□□□□□ -1.3
NFKB1-208ENST00000509165 VWCEQ96DN2 955 aa6.9□□□□□ -1.3
NFKB1-208ENST00000509165 CCDC74BQ96LY2 380 aa6.9□□□□□ -1.3
NFKB1-208ENST00000509165 GMIPQ9P107 970 aa6.9□□□□□ -1.3
NFKB1-208ENST00000509165 ARAP1Q96P48 1450 aa6.9□□□□□ -1.31
NFKB1-208ENST00000509165 RGS13O14921 159 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms