RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 DCP1AQ9NPI6 582 aaPredicted RBP12.54□□□□□ -0.4
SEC31A-228ENST00000509142 ATP8A2Q9NTI2 1148 aa12.54□□□□□ -0.4
SEC31A-228ENST00000509142 USP21Q9UK80 565 aa12.54□□□□□ -0.4
SEC31A-228ENST00000509142 CBFA2T2O43439 604 aa12.53□□□□□ -0.4
SEC31A-228ENST00000509142 CCDC93Q567U6 631 aa12.53□□□□□ -0.4
SEC31A-228ENST00000509142 TRAPPC3LQ5T215 181 aa12.53□□□□□ -0.4
SEC31A-228ENST00000509142 AMOTL1Q8IY63 956 aa12.53□□□□□ -0.4
SEC31A-228ENST00000509142 SMARCE1Q969G3 411 aa12.53□□□□□ -0.4
SEC31A-228ENST00000509142 SERTAD1Q9UHV2 236 aa12.53□□□□□ -0.4
SEC31A-228ENST00000509142 PRPF3O43395 683 aaKnown RBP12.53□□□□□ -0.4
SEC31A-228ENST00000509142 POSTNQ15063 836 aa12.53□□□□□ -0.4
SEC31A-228ENST00000509142 CCDC150Q8NCX0 1101 aa12.53□□□□□ -0.4
SEC31A-228ENST00000509142 ZNF384Q8TF68 577 aa12.53□□□□□ -0.4
SEC31A-228ENST00000509142 FEZ1Q99689 392 aa12.53□□□□□ -0.4
SEC31A-228ENST00000509142 FBXO2Q9UK22 296 aaPredicted RBP12.53□□□□□ -0.4
SEC31A-228ENST00000509142 COL1A1P02452 1464 aaPredicted RBP12.53□□□□□ -0.4
SEC31A-228ENST00000509142 NID2Q14112 1375 aa12.52□□□□□ -0.4
SEC31A-228ENST00000509142 FAM237AA0A1B0GTK4 181 aa12.52□□□□□ -0.4
SEC31A-228ENST00000509142 NMT2O60551 498 aa12.52□□□□□ -0.4
SEC31A-228ENST00000509142 CYP2D6P10635 497 aa12.52□□□□□ -0.4
SEC31A-228ENST00000509142 NLRP5P59047 1200 aa12.52□□□□□ -0.4
SEC31A-228ENST00000509142 KANK3Q6NY19 840 aa12.52□□□□□ -0.4
SEC31A-228ENST00000509142 SYT10Q6XYQ8 523 aa12.52□□□□□ -0.4
SEC31A-228ENST00000509142 MED15Q96RN5 788 aa12.52□□□□□ -0.4
SEC31A-228ENST00000509142 L2HGDHQ9H9P8 463 aa12.52□□□□□ -0.4
SEC31A-228ENST00000509142 FAM53CQ9NYF3 392 aa12.52□□□□□ -0.4
SEC31A-228ENST00000509142 OGFRQ9NZT2 677 aa12.52□□□□□ -0.4
SEC31A-228ENST00000509142 ARPP21Q9UBL0 812 aaPredicted RBP12.52□□□□□ -0.4
SEC31A-228ENST00000509142 SRPRBQ9Y5M8 271 aaKnown RBP12.52□□□□□ -0.4
SEC31A-228ENST00000509142 CHD4Q14839 1912 aa12.52□□□□□ -0.4
SEC31A-228ENST00000509142 RGL2O15211 777 aa12.52□□□□□ -0.41
SEC31A-228ENST00000509142 DDAH1O94760 285 aa12.52□□□□□ -0.41
SEC31A-228ENST00000509142 LDHBP07195 334 aaKnown RBP12.52□□□□□ -0.41
SEC31A-228ENST00000509142 TXNRD3Q86VQ6 643 aa12.52□□□□□ -0.41
SEC31A-228ENST00000509142 SHISA4Q96DD7 197 aa12.52□□□□□ -0.41
SEC31A-228ENST00000509142 MKNK2Q9HBH9 465 aa12.52□□□□□ -0.41
SEC31A-228ENST00000509142 DACH1Q9UI36 760 aa12.52□□□□□ -0.41
SEC31A-228ENST00000509142 MTMR7Q9Y216 660 aa12.52□□□□□ -0.41
SEC31A-228ENST00000509142 DOCK2Q92608 1830 aa12.52□□□□□ -0.41
SEC31A-228ENST00000509142 MDM2Q00987 491 aaPredicted RBP12.52□□□□□ -0.41
SEC31A-228ENST00000509142 DHX8Q14562 1220 aaKnown RBP12.52□□□□□ -0.41
SEC31A-228ENST00000509142 HSP90AA4PQ58FG1 418 aa12.52□□□□□ -0.41
SEC31A-228ENST00000509142 CSRNP2Q9H175 543 aa12.52□□□□□ -0.41
SEC31A-228ENST00000509142 MORC2Q9Y6X9 1032 aaPredicted RBP12.52□□□□□ -0.41
SEC31A-228ENST00000509142 TAF1P21675 1872 aa12.52□□□□□ -0.41
SEC31A-228ENST00000509142 BCL9LQ86UU0 1499 aa12.51□□□□□ -0.41
SEC31A-228ENST00000509142 TROAPQ12815 778 aa12.51□□□□□ -0.41
SEC31A-228ENST00000509142 TRIM65Q6PJ69 517 aa12.51□□□□□ -0.41
SEC31A-228ENST00000509142 TMEM139Q8IV31 216 aa12.51□□□□□ -0.41
SEC31A-228ENST00000509142 DHX58Q96C10 678 aa12.51□□□□□ -0.41
SEC31A-228ENST00000509142 TMX1Q9H3N1 280 aa12.51□□□□□ -0.41
SEC31A-228ENST00000509142 KAT14Q9H8E8 782 aa12.51□□□□□ -0.41
SEC31A-228ENST00000509142 CGNQ9P2M7 1197 aaKnown RBP12.51□□□□□ -0.41
SEC31A-228ENST00000509142 NRAPQ86VF7 1730 aa12.51□□□□□ -0.41
SEC31A-228ENST00000509142 BAZ2BQ9UIF8 2168 aaKnown RBP12.51□□□□□ -0.41
SEC31A-228ENST00000509142 FAM205CA6NFA0 338 aa12.51□□□□□ -0.41
SEC31A-228ENST00000509142 ZNF174Q15697 407 aa12.51□□□□□ -0.41
SEC31A-228ENST00000509142 CNBD1Q8NA66 436 aa12.51□□□□□ -0.41
SEC31A-228ENST00000509142 ST7Q9NRC1 585 aa12.51□□□□□ -0.41
SEC31A-228ENST00000509142 ORC4O43929 436 aa12.51□□□□□ -0.41
SEC31A-228ENST00000509142 KIF5BP33176 963 aa12.51□□□□□ -0.41
SEC31A-228ENST00000509142 ERCC6LQ2NKX8 1250 aa12.51□□□□□ -0.41
SEC31A-228ENST00000509142 MEX3CQ5U5Q3 659 aaKnown RBP12.51□□□□□ -0.41
SEC31A-228ENST00000509142 TMTC3Q6ZXV5 915 aa12.51□□□□□ -0.41
SEC31A-228ENST00000509142 WDR66Q8TBY9 1149 aa12.51□□□□□ -0.41
SEC31A-228ENST00000509142 FANCLQ9NW38 375 aa12.51□□□□□ -0.41
SEC31A-228ENST00000509142 BMP15O95972 392 aa12.5□□□□□ -0.41
SEC31A-228ENST00000509142 EVX2Q03828 476 aa12.5□□□□□ -0.41
SEC31A-228ENST00000509142 PKN1Q16512 942 aa12.5□□□□□ -0.41
SEC31A-228ENST00000509142 ZNF579Q8NAF0 562 aaKnown RBP12.5□□□□□ -0.41
SEC31A-228ENST00000509142 COL4A1P02462 1669 aa12.5□□□□□ -0.41
SEC31A-228ENST00000509142 BAG3O95817 575 aa12.5□□□□□ -0.41
SEC31A-228ENST00000509142 USP17L8P0C7I0 530 aa12.5□□□□□ -0.41
SEC31A-228ENST00000509142 AFMP43652 599 aa12.5□□□□□ -0.41
SEC31A-228ENST00000509142 GRAMD1CQ8IYS0 662 aa12.5□□□□□ -0.41
SEC31A-228ENST00000509142 RPGRQ92834 1020 aaKnown RBP12.5□□□□□ -0.41
SEC31A-228ENST00000509142 PHF20Q9BVI0 1012 aa12.5□□□□□ -0.41
SEC31A-228ENST00000509142 MYH2Q9UKX2 1941 aa12.5□□□□□ -0.41
SEC31A-228ENST00000509142 PRR29P0C7W0 189 aa12.5□□□□□ -0.41
SEC31A-228ENST00000509142 TOP1P11387 765 aaKnown RBP12.5□□□□□ -0.41
SEC31A-228ENST00000509142 TFAP4Q01664 338 aa12.5□□□□□ -0.41
SEC31A-228ENST00000509142 FAM196AQ6ZSG2 479 aa12.5□□□□□ -0.41
SEC31A-228ENST00000509142 ERO1AQ96HE7 468 aa12.5□□□□□ -0.41
SEC31A-228ENST00000509142 MAN1B1Q9UKM7 699 aa12.5□□□□□ -0.41
SEC31A-228ENST00000509142 SLU7O95391 586 aaKnown RBP12.49□□□□□ -0.41
SEC31A-228ENST00000509142 ZNF827Q17R98 1081 aa12.49□□□□□ -0.41
SEC31A-228ENST00000509142 USP49Q70CQ1 688 aa12.49□□□□□ -0.41
SEC31A-228ENST00000509142 ZNF804AQ7Z570 1209 aa12.49□□□□□ -0.41
SEC31A-228ENST00000509142 REXO1L1PQ8IX06 675 aa12.49□□□□□ -0.41
SEC31A-228ENST00000509142 GTPBP4Q9BZE4 634 aaKnown RBP12.49□□□□□ -0.41
SEC31A-228ENST00000509142 TIAM2Q8IVF5 1701 aa12.49□□□□□ -0.41
SEC31A-228ENST00000509142 PSDA5PKW4 1024 aaPredicted RBP12.49□□□□□ -0.41
SEC31A-228ENST00000509142 GSTO1P78417 241 aa12.49□□□□□ -0.41
SEC31A-228ENST00000509142 FMR1Q06787 632 aaKnown RBP eCLIP12.49□□□□□ -0.416e-7■■□□□ 13.6
SEC31A-228ENST00000509142 TTC38Q5R3I4 469 aa12.49□□□□□ -0.41
SEC31A-228ENST00000509142 ZNF444Q8N0Y2 327 aaPredicted RBP12.49□□□□□ -0.41
SEC31A-228ENST00000509142 SRBD1Q8N5C6 995 aaKnown RBP12.49□□□□□ -0.41
SEC31A-228ENST00000509142 MLKLQ8NB16 471 aa12.49□□□□□ -0.41
SEC31A-228ENST00000509142 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.49□□□□□ -0.41
SEC31A-228ENST00000509142 BAZ2AQ9UIF9 1905 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms