RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 MSX1P28360 303 aa5.69□□□□□ -1.5
CALCOCO2-213ENST00000509112 ZNF157P51786 506 aaPredicted RBP5.69□□□□□ -1.5
CALCOCO2-213ENST00000509112 PTSQ03393 145 aa5.69□□□□□ -1.5
CALCOCO2-213ENST00000509112 TCIRG1Q13488 830 aa5.69□□□□□ -1.5
CALCOCO2-213ENST00000509112 COX20Q5RI15 118 aa5.69□□□□□ -1.5
CALCOCO2-213ENST00000509112 FIGNL1Q6PIW4 674 aa5.69□□□□□ -1.5
CALCOCO2-213ENST00000509112 KRT26Q7Z3Y9 468 aa5.69□□□□□ -1.5
CALCOCO2-213ENST00000509112 USP48Q86UV5 1035 aa5.69□□□□□ -1.5
CALCOCO2-213ENST00000509112 NLRP10Q86W26 655 aa5.69□□□□□ -1.5
CALCOCO2-213ENST00000509112 PGBD3Q8N328 593 aa5.69□□□□□ -1.5
CALCOCO2-213ENST00000509112 RHPN1Q8TCX5 695 aa5.69□□□□□ -1.5
CALCOCO2-213ENST00000509112 DCPSQ96C86 337 aaKnown RBP5.69□□□□□ -1.5
CALCOCO2-213ENST00000509112 CSRNP1Q96S65 589 aa5.69□□□□□ -1.5
CALCOCO2-213ENST00000509112 PLEKHF1Q96S99 279 aa5.69□□□□□ -1.5
CALCOCO2-213ENST00000509112 ZIC5Q96T25 663 aa5.69□□□□□ -1.5
CALCOCO2-213ENST00000509112 EYA3Q99504 573 aa5.69□□□□□ -1.5
CALCOCO2-213ENST00000509112 FAM13BQ9NYF5 915 aa5.69□□□□□ -1.5
CALCOCO2-213ENST00000509112 PODXL2Q9NZ53 605 aa5.69□□□□□ -1.5
CALCOCO2-213ENST00000509112 STIM2Q9P246 746 aa5.69□□□□□ -1.5
CALCOCO2-213ENST00000509112 SCN9AQ15858 1988 aa5.69□□□□□ -1.5
CALCOCO2-213ENST00000509112 TRPA1O75762 1119 aa5.68□□□□□ -1.5
CALCOCO2-213ENST00000509112 MYL6BP14649 208 aa5.68□□□□□ -1.5
CALCOCO2-213ENST00000509112 TXLNAP40222 546 aa5.68□□□□□ -1.5
CALCOCO2-213ENST00000509112 TM4SF4P48230 202 aa5.68□□□□□ -1.5
CALCOCO2-213ENST00000509112 ZNF280AP59817 542 aaPredicted RBP5.68□□□□□ -1.5
CALCOCO2-213ENST00000509112 TRIM28Q13263 835 aaKnown RBP5.68□□□□□ -1.5
CALCOCO2-213ENST00000509112 NFE2L2Q16236 605 aa5.68□□□□□ -1.5
CALCOCO2-213ENST00000509112 EFHC2Q5JST6 749 aa5.68□□□□□ -1.5
CALCOCO2-213ENST00000509112 SH3PXD2AQ5TCZ1 1133 aa5.68□□□□□ -1.5
CALCOCO2-213ENST00000509112 RASAL3Q86YV0 1011 aa5.68□□□□□ -1.5
CALCOCO2-213ENST00000509112 AGBL3Q8NEM8 1001 aa5.68□□□□□ -1.5
CALCOCO2-213ENST00000509112 CITED4Q96RK1 184 aa5.68□□□□□ -1.5
CALCOCO2-213ENST00000509112 ZNF408Q9H9D4 720 aa5.68□□□□□ -1.5
CALCOCO2-213ENST00000509112 MIS18AQ9NYP9 233 aa5.68□□□□□ -1.5
CALCOCO2-213ENST00000509112 SEPT3Q9UH03 358 aa5.68□□□□□ -1.5
CALCOCO2-213ENST00000509112 ZNF646O15015 1829 aaPredicted RBP5.68□□□□□ -1.5
CALCOCO2-213ENST00000509112 RTL9Q8NET4 1388 aa5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 TNFRSF10BO14763 440 aa5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 TCERG1O14776 1098 aaKnown RBP5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 RPLP1P05386 114 aaKnown RBP5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 HOXB7P09629 217 aa5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 HSP90B1P14625 803 aaKnown RBP5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 ERCC3P19447 782 aa5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 PHKA2P46019 1235 aa5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 LAMC2Q13753 1193 aa5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 KIF4BQ2VIQ3 1234 aa5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 FBXO46Q6PJ61 603 aaPredicted RBP5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 SLC51AQ86UW1 340 aa5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 TRIM22Q8IYM9 498 aa5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 NGEFQ8N5V2 710 aa5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 CCDC155Q8N6L0 562 aa5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 NANOS1Q8WY41 292 aaKnown RBP5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 MKNK1Q9BUB5 465 aa5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 ISCA1Q9BUE6 129 aa5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 EFCC1Q9HA90 598 aa5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 TRMT112Q9UI30 125 aaKnown RBP5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 HCN4Q9Y3Q4 1203 aa5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 DNMT3AQ9Y6K1 912 aaPredicted RBP5.67□□□□□ -1.5
CALCOCO2-213ENST00000509112 A0A1W2PNR3 127 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 SHTN1A0MZ66 631 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 UNCXA6NJT0 531 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 ADM5C9JUS6 153 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 ECE2O60344 883 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 LGR5O75473 907 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 EGFRP00533 1210 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 FAM157BP0CG42 384 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 HCLS1P14317 486 aaPredicted RBP5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 RHOQP17081 205 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 ITGA6P23229 1130 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 SERPINB4P48594 390 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 SOX10P56693 466 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 LMOD3Q0VAK6 560 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 TBC1D10BQ4KMP7 808 aaPredicted RBP5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 INTS3Q68E01 1043 aaKnown RBP5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 CAPN12Q6ZSI9 719 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 COPS6Q7L5N1 327 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 GLYCTKQ8IVS8 523 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 PLBD2Q8NHP8 589 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 TBC1D16Q8TBP0 767 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 CDCA5Q96FF9 252 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 GMLQ99445 158 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 PCGF6Q9BYE7 350 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 NEUROD4Q9HD90 331 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 POLLQ9UGP5 575 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 TSPYL4Q9UJ04 414 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 LRFN2Q9ULH4 789 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 NSFL1CQ9UNZ2 370 aaKnown RBP5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 ECM29Q5VYK3 1845 aa5.66□□□□□ -1.5
CALCOCO2-213ENST00000509112 COL1A1P02452 1464 aaPredicted RBP5.65□□□□□ -1.5
CALCOCO2-213ENST00000509112 GPR25O00155 361 aa5.65□□□□□ -1.5
CALCOCO2-213ENST00000509112 SNRPBP14678 240 aaKnown RBP5.65□□□□□ -1.5
CALCOCO2-213ENST00000509112 USP5P45974 858 aa5.65□□□□□ -1.5
CALCOCO2-213ENST00000509112 INHBEP58166 350 aa5.65□□□□□ -1.5
CALCOCO2-213ENST00000509112 RPS8P62241 208 aaKnown RBP5.65□□□□□ -1.5
CALCOCO2-213ENST00000509112 GPSM2P81274 684 aa5.65□□□□□ -1.5
CALCOCO2-213ENST00000509112 SREBF2Q12772 1141 aa5.65□□□□□ -1.5
CALCOCO2-213ENST00000509112 ECM1Q16610 540 aa5.65□□□□□ -1.5
CALCOCO2-213ENST00000509112 PROSER3Q2NL68 480 aa5.65□□□□□ -1.5
CALCOCO2-213ENST00000509112 ARSJQ5FYB0 599 aaPredicted RBP5.65□□□□□ -1.5
CALCOCO2-213ENST00000509112 PODNQ7Z5L7 613 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms