RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 RXRAP19793 462 aa20.44■□□□□ 0.86
RNF4-209ENST00000507784 EVCP57679 992 aa20.44■□□□□ 0.86
RNF4-209ENST00000507784 CUL4AQ13619 759 aa20.44■□□□□ 0.86
RNF4-209ENST00000507784 APOA5Q6Q788 366 aa20.44■□□□□ 0.86
RNF4-209ENST00000507784 DLK2Q6UY11 383 aa20.44■□□□□ 0.86
RNF4-209ENST00000507784 CCDC144CPQ8IYA2 1237 aa20.44■□□□□ 0.86
RNF4-209ENST00000507784 ZNF654Q8IZM8 581 aa20.44■□□□□ 0.86
RNF4-209ENST00000507784 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.44■□□□□ 0.86
RNF4-209ENST00000507784 ZNF341Q9BYN7 854 aa20.44■□□□□ 0.86
RNF4-209ENST00000507784 GOLGA8AA7E2F4 631 aa20.43■□□□□ 0.86
RNF4-209ENST00000507784 GH2P01242 217 aa20.43■□□□□ 0.86
RNF4-209ENST00000507784 METAP2P50579 478 aaKnown RBP eCLIP20.43■□□□□ 0.86
RNF4-209ENST00000507784 MAP3K10Q02779 954 aa20.43■□□□□ 0.86
RNF4-209ENST00000507784 SCRN1Q12765 414 aa20.43■□□□□ 0.86
RNF4-209ENST00000507784 PRKG1Q13976 671 aa20.43■□□□□ 0.86
RNF4-209ENST00000507784 SEPT2Q15019 361 aa20.43■□□□□ 0.86
RNF4-209ENST00000507784 RAB3GAP1Q15042 981 aa20.43■□□□□ 0.86
RNF4-209ENST00000507784 SHROOM1Q2M3G4 852 aaPredicted RBP20.43■□□□□ 0.86
RNF4-209ENST00000507784 RCSD1Q6JBY9 416 aa20.43■□□□□ 0.86
RNF4-209ENST00000507784 TMEM179Q6ZVK1 233 aa20.43■□□□□ 0.86
RNF4-209ENST00000507784 MICU3Q86XE3 530 aa20.43■□□□□ 0.86
RNF4-209ENST00000507784 ANKS1AQ92625 1134 aa20.43■□□□□ 0.86
RNF4-209ENST00000507784 GTF3C6Q969F1 213 aa20.43■□□□□ 0.86
RNF4-209ENST00000507784 CLIP2Q9UDT6 1046 aa20.43■□□□□ 0.86
RNF4-209ENST00000507784 MTMR7Q9Y216 660 aa20.43■□□□□ 0.86
RNF4-209ENST00000507784 PLIN4Q96Q06 1357 aa20.43■□□□□ 0.86
RNF4-209ENST00000507784 IGKV6D-41A0A0C4DH26 115 aa20.42■□□□□ 0.86
RNF4-209ENST00000507784 PPP4R3BQ5MIZ7 849 aa20.42■□□□□ 0.86
RNF4-209ENST00000507784 CDC37L1Q7L3B6 337 aa20.42■□□□□ 0.86
RNF4-209ENST00000507784 CLEC10AQ8IUN9 316 aa20.42■□□□□ 0.86
RNF4-209ENST00000507784 TMEM47Q9BQJ4 181 aa20.42■□□□□ 0.86
RNF4-209ENST00000507784 GLIS2Q9BZE0 524 aaPredicted RBP20.42■□□□□ 0.86
RNF4-209ENST00000507784 NCOA5Q9HCD5 579 aaKnown RBP20.42■□□□□ 0.86
RNF4-209ENST00000507784 NMRK2Q9NPI5 230 aa20.42■□□□□ 0.86
RNF4-209ENST00000507784 MTMR4Q9NYA4 1195 aa20.42■□□□□ 0.86
RNF4-209ENST00000507784 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.42■□□□□ 0.86
RNF4-209ENST00000507784 MYH4Q9Y623 1939 aa20.41■□□□□ 0.86
RNF4-209ENST00000507784 POTEIP0CG38 1075 aa20.41■□□□□ 0.86
RNF4-209ENST00000507784 POTEJP0CG39 1038 aa20.41■□□□□ 0.86
RNF4-209ENST00000507784 TOP1P11387 765 aaKnown RBP20.41■□□□□ 0.86
RNF4-209ENST00000507784 CAP2P40123 477 aa20.41■□□□□ 0.86
RNF4-209ENST00000507784 JAG1P78504 1218 aa20.41■□□□□ 0.86
RNF4-209ENST00000507784 PNMA1Q8ND90 353 aa20.41■□□□□ 0.86
RNF4-209ENST00000507784 CHMP4CQ96CF2 233 aa20.41■□□□□ 0.86
RNF4-209ENST00000507784 KANSL2Q9H9L4 492 aa20.41■□□□□ 0.86
RNF4-209ENST00000507784 HPS5Q9UPZ3 1129 aa20.41■□□□□ 0.86
RNF4-209ENST00000507784 SMC3Q9UQE7 1217 aa20.41■□□□□ 0.86
RNF4-209ENST00000507784 ATAD5Q96QE3 1844 aa20.41■□□□□ 0.86
RNF4-209ENST00000507784 GREB1LQ9C091 1923 aaPredicted RBP20.41■□□□□ 0.86
RNF4-209ENST00000507784 DTNBO60941 627 aa20.4■□□□□ 0.86
RNF4-209ENST00000507784 TTLL1O95922 423 aa20.4■□□□□ 0.86
RNF4-209ENST00000507784 CALM1P0DP23 149 aa20.4■□□□□ 0.86
RNF4-209ENST00000507784 CALM2P0DP24 149 aa20.4■□□□□ 0.86
RNF4-209ENST00000507784 CALM3P0DP25 149 aa20.4■□□□□ 0.86
RNF4-209ENST00000507784 GUCY1A2P33402 732 aa20.4■□□□□ 0.86
RNF4-209ENST00000507784 NF2P35240 595 aa20.4■□□□□ 0.86
RNF4-209ENST00000507784 ST3GAL1Q11201 340 aa20.4■□□□□ 0.86
RNF4-209ENST00000507784 CDCA5Q96FF9 252 aa20.4■□□□□ 0.86
RNF4-209ENST00000507784 INTS4Q96HW7 963 aaKnown RBP20.4■□□□□ 0.86
RNF4-209ENST00000507784 ZBTB21Q9ULJ3 1066 aa20.4■□□□□ 0.86
RNF4-209ENST00000507784 FZD1Q9UP38 647 aa20.4■□□□□ 0.86
RNF4-209ENST00000507784 PHF20L1A8MW92 1017 aa20.39■□□□□ 0.85
RNF4-209ENST00000507784 CPLX1O14810 134 aa20.39■□□□□ 0.85
RNF4-209ENST00000507784 DHX16O60231 1041 aaKnown RBP20.39■□□□□ 0.85
RNF4-209ENST00000507784 DDAH1O94760 285 aa20.39■□□□□ 0.85
RNF4-209ENST00000507784 EEF2P13639 858 aaKnown RBP20.39■□□□□ 0.85
RNF4-209ENST00000507784 ICA1Q05084 483 aa20.39■□□□□ 0.85
RNF4-209ENST00000507784 RTN1Q16799 776 aa20.39■□□□□ 0.85
RNF4-209ENST00000507784 MAP1SQ66K74 1059 aaPredicted RBP20.39■□□□□ 0.85
RNF4-209ENST00000507784 LRRC47Q8N1G4 583 aaKnown RBP20.39■□□□□ 0.85
RNF4-209ENST00000507784 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.39■□□□□ 0.85
RNF4-209ENST00000507784 RAD21O60216 631 aa20.38■□□□□ 0.85
RNF4-209ENST00000507784 CTNND1O60716 968 aaKnown RBP20.38■□□□□ 0.85
RNF4-209ENST00000507784 TTLL12Q14166 644 aaPredicted RBP20.38■□□□□ 0.85
RNF4-209ENST00000507784 FANCBQ8NB91 859 aa20.38■□□□□ 0.85
RNF4-209ENST00000507784 CTCFLQ8NI51 663 aaPredicted RBP20.38■□□□□ 0.85
RNF4-209ENST00000507784 WRNIP1Q96S55 665 aa20.38■□□□□ 0.85
RNF4-209ENST00000507784 NYAP2Q9P242 653 aa20.38■□□□□ 0.85
RNF4-209ENST00000507784 SRCAPQ6ZRS2 3230 aa20.37■□□□□ 0.85
RNF4-209ENST00000507784 ASNSP08243 561 aa20.37■□□□□ 0.85
RNF4-209ENST00000507784 CDC27P30260 824 aa20.37■□□□□ 0.85
RNF4-209ENST00000507784 INPP5BP32019 993 aa20.37■□□□□ 0.85
RNF4-209ENST00000507784 ADD1P35611 737 aaKnown RBP20.37■□□□□ 0.85
RNF4-209ENST00000507784 NOVP48745 357 aa20.37■□□□□ 0.85
RNF4-209ENST00000507784 CPLX2Q6PUV4 134 aaKnown RBP20.37■□□□□ 0.85
RNF4-209ENST00000507784 LDHDQ86WU2 507 aa20.37■□□□□ 0.85
RNF4-209ENST00000507784 ARHGEF10LQ9HCE6 1279 aa20.37■□□□□ 0.85
RNF4-209ENST00000507784 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.37■□□□□ 0.85
RNF4-209ENST00000507784 CCDC196A0A1B0GTZ2 297 aa20.36■□□□□ 0.85
RNF4-209ENST00000507784 PPP1R12BO60237 982 aaPredicted RBP20.36■□□□□ 0.85
RNF4-209ENST00000507784 USP2O75604 605 aaPredicted RBP20.36■□□□□ 0.85
RNF4-209ENST00000507784 GJB2P29033 226 aa20.36■□□□□ 0.85
RNF4-209ENST00000507784 RCAN1P53805 252 aa20.36■□□□□ 0.85
RNF4-209ENST00000507784 DDX11Q96FC9 970 aa20.36■□□□□ 0.85
RNF4-209ENST00000507784 CWC22Q9HCG8 908 aaKnown RBP20.36■□□□□ 0.85
RNF4-209ENST00000507784 RBM28Q9NW13 759 aaKnown RBP20.36■□□□□ 0.85
RNF4-209ENST00000507784 ZNF112Q9UJU3 913 aa20.36■□□□□ 0.85
RNF4-209ENST00000507784 SSC5DA1L4H1 1573 aa20.36■□□□□ 0.85
RNF4-209ENST00000507784 PPFIA3O75145 1194 aa20.35■□□□□ 0.85
RNF4-209ENST00000507784 TROAPQ12815 778 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms