RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 POLR3DP05423 398 aaPredicted RBP19.46■□□□□ 0.71
HOXC4-203ENST00000507650 PABPC4Q13310 644 aaKnown RBP eCLIP19.46■□□□□ 0.71
HOXC4-203ENST00000507650 RAB3GAP1Q15042 981 aa19.46■□□□□ 0.71
HOXC4-203ENST00000507650 UBE3CQ15386 1083 aa19.46■□□□□ 0.71
HOXC4-203ENST00000507650 Q3C1V9 767 aa19.46■□□□□ 0.71
HOXC4-203ENST00000507650 KIAA1755Q5JYT7 1200 aa19.46■□□□□ 0.71
HOXC4-203ENST00000507650 USP17L2Q6R6M4 530 aa19.46■□□□□ 0.71
HOXC4-203ENST00000507650 UBE2Q1Q7Z7E8 422 aa19.46■□□□□ 0.71
HOXC4-203ENST00000507650 CLEC10AQ8IUN9 316 aa19.46■□□□□ 0.71
HOXC4-203ENST00000507650 SLAIN1Q8ND83 568 aa19.46■□□□□ 0.71
HOXC4-203ENST00000507650 INHAP05111 366 aa19.45■□□□□ 0.7
HOXC4-203ENST00000507650 IRX3P78415 501 aaPredicted RBP19.45■□□□□ 0.7
HOXC4-203ENST00000507650 SIAH1Q8IUQ4 282 aa19.45■□□□□ 0.7
HOXC4-203ENST00000507650 CRBNQ96SW2 442 aa19.45■□□□□ 0.7
HOXC4-203ENST00000507650 KIAA1683Q9H0B3 1180 aa19.45■□□□□ 0.7
HOXC4-203ENST00000507650 VCAM1P19320 739 aa19.44■□□□□ 0.7
HOXC4-203ENST00000507650 TRIM32Q13049 653 aa19.44■□□□□ 0.7
HOXC4-203ENST00000507650 PXYLP1Q8TE99 480 aa19.44■□□□□ 0.7
HOXC4-203ENST00000507650 PORCNQ9H237 461 aa19.44■□□□□ 0.7
HOXC4-203ENST00000507650 MYH4Q9Y623 1939 aa19.44■□□□□ 0.7
HOXC4-203ENST00000507650 GJB1P08034 283 aa19.43■□□□□ 0.7
HOXC4-203ENST00000507650 AKR1B1P15121 316 aa19.43■□□□□ 0.7
HOXC4-203ENST00000507650 GJA8P48165 433 aa19.43■□□□□ 0.7
HOXC4-203ENST00000507650 C12orf60Q5U649 245 aa19.43■□□□□ 0.7
HOXC4-203ENST00000507650 PI4K2BQ8TCG2 481 aa19.43■□□□□ 0.7
HOXC4-203ENST00000507650 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.43■□□□□ 0.7
HOXC4-203ENST00000507650 RNF208Q9H0X6 261 aa19.43■□□□□ 0.7
HOXC4-203ENST00000507650 ATP8A2Q9NTI2 1148 aa19.43■□□□□ 0.7
HOXC4-203ENST00000507650 SALL3Q9BXA9 1300 aa19.43■□□□□ 0.7
HOXC4-203ENST00000507650 USP17L12C9JPN9 530 aa19.42■□□□□ 0.7
HOXC4-203ENST00000507650 USP17L21D6R901 530 aa19.42■□□□□ 0.7
HOXC4-203ENST00000507650 KBTBD3Q8NAB2 608 aa19.42■□□□□ 0.7
HOXC4-203ENST00000507650 OSBP2Q969R2 916 aa19.42■□□□□ 0.7
HOXC4-203ENST00000507650 COA7Q96BR5 231 aa19.42■□□□□ 0.7
HOXC4-203ENST00000507650 STRBPQ96SI9 672 aaKnown RBP19.42■□□□□ 0.7
HOXC4-203ENST00000507650 FEZ1Q99689 392 aa19.42■□□□□ 0.7
HOXC4-203ENST00000507650 ZNFX1Q9P2E3 1918 aaKnown RBP19.42■□□□□ 0.7
HOXC4-203ENST00000507650 SLC34A2O95436 690 aa19.41■□□□□ 0.7
HOXC4-203ENST00000507650 ERVK-9P63128 1117 aa19.41■□□□□ 0.7
HOXC4-203ENST00000507650 ERVK-24P63145 666 aa19.41■□□□□ 0.7
HOXC4-203ENST00000507650 CTR9Q6PD62 1173 aa19.41■□□□□ 0.7
HOXC4-203ENST00000507650 CATSPERGQ6ZRH7 1159 aa19.41■□□□□ 0.7
HOXC4-203ENST00000507650 TRIB2Q92519 343 aa19.41■□□□□ 0.7
HOXC4-203ENST00000507650 PAK6Q9NQU5 681 aaPredicted RBP19.41■□□□□ 0.7
HOXC4-203ENST00000507650 BIN2Q9UBW5 565 aaPredicted RBP19.41■□□□□ 0.7
HOXC4-203ENST00000507650 TAOK2Q9UL54 1235 aa19.41■□□□□ 0.7
HOXC4-203ENST00000507650 SLC4A4Q9Y6R1 1079 aa19.41■□□□□ 0.7
HOXC4-203ENST00000507650 ZNF236Q9UL36 1845 aa19.41■□□□□ 0.7
HOXC4-203ENST00000507650 CDK8P49336 464 aa19.4■□□□□ 0.7
HOXC4-203ENST00000507650 C16orf86Q6ZW13 317 aa19.4■□□□□ 0.7
HOXC4-203ENST00000507650 GPRC5AQ8NFJ5 357 aa19.4■□□□□ 0.7
HOXC4-203ENST00000507650 U2AF1L4Q8WU68 220 aaKnown RBP19.4■□□□□ 0.7
HOXC4-203ENST00000507650 USP6NLQ92738 828 aa19.4■□□□□ 0.7
HOXC4-203ENST00000507650 YTHDC1Q96MU7 727 aaKnown RBP19.4■□□□□ 0.7
HOXC4-203ENST00000507650 PAGR1Q9BTK6 254 aa19.4■□□□□ 0.7
HOXC4-203ENST00000507650 EPB41L4AQ9HCS5 686 aaPredicted RBP19.4■□□□□ 0.7
HOXC4-203ENST00000507650 CABP5Q9NP86 173 aa19.4■□□□□ 0.7
HOXC4-203ENST00000507650 BTBD7Q9P203 1132 aa19.4■□□□□ 0.7
HOXC4-203ENST00000507650 SPDYE16A6NNV3 312 aaPredicted RBP19.39■□□□□ 0.69
HOXC4-203ENST00000507650 GSG1L2A8MUP6 293 aa19.39■□□□□ 0.69
HOXC4-203ENST00000507650 USP17L15C9J2P7 530 aa19.39■□□□□ 0.69
HOXC4-203ENST00000507650 USP17L13C9JLJ4 530 aa19.39■□□□□ 0.69
HOXC4-203ENST00000507650 USP17L11C9JVI0 530 aa19.39■□□□□ 0.69
HOXC4-203ENST00000507650 USP17L18D6R9N7 530 aa19.39■□□□□ 0.69
HOXC4-203ENST00000507650 USP17L22D6RA61 530 aa19.39■□□□□ 0.69
HOXC4-203ENST00000507650 USP17L17D6RBQ6 530 aa19.39■□□□□ 0.69
HOXC4-203ENST00000507650 USP17L19D6RCP7 530 aa19.39■□□□□ 0.69
HOXC4-203ENST00000507650 USP17L20D6RJB6 530 aa19.39■□□□□ 0.69
HOXC4-203ENST00000507650 M0R2C6 588 aa19.39■□□□□ 0.69
HOXC4-203ENST00000507650 UBXN2AP68543 259 aa19.39■□□□□ 0.69
HOXC4-203ENST00000507650 USP17L24Q0WX57 530 aa19.39■□□□□ 0.69
HOXC4-203ENST00000507650 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.39■□□□□ 0.69
HOXC4-203ENST00000507650 RPAP3Q9H6T3 665 aaPredicted RBP19.39■□□□□ 0.69
HOXC4-203ENST00000507650 MPHOSPH10O00566 681 aaKnown RBP19.38■□□□□ 0.69
HOXC4-203ENST00000507650 RANBP2P49792 3224 aaKnown RBP19.38■□□□□ 0.69
HOXC4-203ENST00000507650 USP14P54578 494 aa19.38■□□□□ 0.69
HOXC4-203ENST00000507650 MORN1Q5T089 497 aa19.38■□□□□ 0.69
HOXC4-203ENST00000507650 TMEM179Q6ZVK1 233 aa19.38■□□□□ 0.69
HOXC4-203ENST00000507650 SWAP70Q9UH65 585 aa19.38■□□□□ 0.69
HOXC4-203ENST00000507650 ROBO3Q96MS0 1386 aa19.37■□□□□ 0.69
HOXC4-203ENST00000507650 TTC41PQ6P2S7 1318 aa19.37■□□□□ 0.69
HOXC4-203ENST00000507650 RNF113AO15541 343 aaKnown RBP19.37■□□□□ 0.69
HOXC4-203ENST00000507650 SGPL1O95470 568 aa19.37■□□□□ 0.69
HOXC4-203ENST00000507650 CYP2B6P20813 491 aa19.37■□□□□ 0.69
HOXC4-203ENST00000507650 LBX2Q6XYB7 198 aa19.37■□□□□ 0.69
HOXC4-203ENST00000507650 GPR142Q7Z601 462 aa19.37■□□□□ 0.69
HOXC4-203ENST00000507650 APPBP2Q92624 585 aa19.37■□□□□ 0.69
HOXC4-203ENST00000507650 DEFB118Q96PH6 123 aa19.37■□□□□ 0.69
HOXC4-203ENST00000507650 SEC62Q99442 399 aaKnown RBP19.37■□□□□ 0.69
HOXC4-203ENST00000507650 CRISPLD2Q9H0B8 497 aa19.37■□□□□ 0.69
HOXC4-203ENST00000507650 HMGCRP04035 888 aa19.36■□□□□ 0.69
HOXC4-203ENST00000507650 CCL14Q16627 93 aa19.36■□□□□ 0.69
HOXC4-203ENST00000507650 MAP3K21Q5TCX8 1036 aa19.36■□□□□ 0.69
HOXC4-203ENST00000507650 ZSCAN25Q6NSZ9 544 aa19.36■□□□□ 0.69
HOXC4-203ENST00000507650 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.36■□□□□ 0.69
HOXC4-203ENST00000507650 RABGAP1Q9Y3P9 1069 aa19.36■□□□□ 0.69
HOXC4-203ENST00000507650 PLXNA1Q9UIW2 1896 aa19.36■□□□□ 0.69
HOXC4-203ENST00000507650 FOXP2O15409 715 aa19.35■□□□□ 0.69
HOXC4-203ENST00000507650 GPAA1O43292 621 aa19.35■□□□□ 0.69
HOXC4-203ENST00000507650 MNX1P50219 401 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms