RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 FOXP4Q8IVH2 680 aaPredicted RBP16.4■□□□□ 0.22
SERF1B-204ENST00000506542 PRDM10Q9NQV6 1147 aa16.4■□□□□ 0.22
SERF1B-204ENST00000506542 KCNH4Q9UQ05 1017 aa16.4■□□□□ 0.22
SERF1B-204ENST00000506542 CYP46A1Q9Y6A2 500 aa16.4■□□□□ 0.22
SERF1B-204ENST00000506542 FGAP02671 866 aa16.4■□□□□ 0.22
SERF1B-204ENST00000506542 CAP1Q01518 475 aa16.4■□□□□ 0.22
SERF1B-204ENST00000506542 CTR9Q6PD62 1173 aa16.4■□□□□ 0.22
SERF1B-204ENST00000506542 REM2Q8IYK8 340 aaPredicted RBP16.4■□□□□ 0.22
SERF1B-204ENST00000506542 ZMYM6O95789 1325 aa16.39■□□□□ 0.21
SERF1B-204ENST00000506542 GH2P01242 217 aa16.39■□□□□ 0.21
SERF1B-204ENST00000506542 CETPP11597 493 aa16.39■□□□□ 0.21
SERF1B-204ENST00000506542 CPA1P15085 419 aa16.39■□□□□ 0.21
SERF1B-204ENST00000506542 GNAT2P19087 354 aa16.39■□□□□ 0.21
SERF1B-204ENST00000506542 GABPAQ06546 454 aa16.39■□□□□ 0.21
SERF1B-204ENST00000506542 SPP2Q13103 211 aa16.39■□□□□ 0.21
SERF1B-204ENST00000506542 ALX1Q15699 326 aa16.39■□□□□ 0.21
SERF1B-204ENST00000506542 TTC6Q86TZ1 520 aa16.39■□□□□ 0.21
SERF1B-204ENST00000506542 CLEC10AQ8IUN9 316 aa16.39■□□□□ 0.21
SERF1B-204ENST00000506542 ZNF296Q8WUU4 475 aaPredicted RBP16.39■□□□□ 0.21
SERF1B-204ENST00000506542 PATL2C9JE40 543 aaKnown RBP16.38■□□□□ 0.21
SERF1B-204ENST00000506542 INHBEP58166 350 aa16.38■□□□□ 0.21
SERF1B-204ENST00000506542 IMMTQ16891 758 aaKnown RBP16.38■□□□□ 0.21
SERF1B-204ENST00000506542 GPAT2Q6NUI2 795 aa16.38■□□□□ 0.21
SERF1B-204ENST00000506542 TATDN1Q6P1N9 297 aa16.38■□□□□ 0.21
SERF1B-204ENST00000506542 BLOC1S2Q6QNY1 142 aa16.38■□□□□ 0.21
SERF1B-204ENST00000506542 GADL1Q6ZQY3 521 aa16.38■□□□□ 0.21
SERF1B-204ENST00000506542 EHD4Q9H223 541 aa16.38■□□□□ 0.21
SERF1B-204ENST00000506542 ATP8A2Q9NTI2 1148 aa16.38■□□□□ 0.21
SERF1B-204ENST00000506542 ZBTB21Q9ULJ3 1066 aa16.38■□□□□ 0.21
SERF1B-204ENST00000506542 GPR25O00155 361 aa16.37■□□□□ 0.21
SERF1B-204ENST00000506542 APPP05067 770 aa16.37■□□□□ 0.21
SERF1B-204ENST00000506542 TAF1CQ15572 869 aaPredicted RBP16.37■□□□□ 0.21
SERF1B-204ENST00000506542 TREML2Q5T2D2 321 aa16.37■□□□□ 0.21
SERF1B-204ENST00000506542 C12orf60Q5U649 245 aa16.37■□□□□ 0.21
SERF1B-204ENST00000506542 STOX1Q6ZVD7 989 aa16.37■□□□□ 0.21
SERF1B-204ENST00000506542 SPRYD3Q8NCJ5 442 aa16.37■□□□□ 0.21
SERF1B-204ENST00000506542 NEK1Q96PY6 1258 aa16.37■□□□□ 0.21
SERF1B-204ENST00000506542 SLKQ9H2G2 1235 aaPredicted RBP16.37■□□□□ 0.21
SERF1B-204ENST00000506542 PDRG1Q9NUG6 133 aa16.37■□□□□ 0.21
SERF1B-204ENST00000506542 A0A0G2JLL6 359 aaPredicted RBP16.37■□□□□ 0.21
SERF1B-204ENST00000506542 PDHXO00330 501 aa16.37■□□□□ 0.21
SERF1B-204ENST00000506542 CYP2C8P10632 490 aa16.37■□□□□ 0.21
SERF1B-204ENST00000506542 RPS6KB1P23443 525 aa16.37■□□□□ 0.21
SERF1B-204ENST00000506542 AK2P54819 239 aa16.37■□□□□ 0.21
SERF1B-204ENST00000506542 HMGCS2P54868 508 aa16.37■□□□□ 0.21
SERF1B-204ENST00000506542 MTMR2Q13614 643 aa16.37■□□□□ 0.21
SERF1B-204ENST00000506542 CERKLQ49MI3 558 aaPredicted RBP16.37■□□□□ 0.21
SERF1B-204ENST00000506542 PRRT2Q7Z6L0 340 aaPredicted RBP16.37■□□□□ 0.21
SERF1B-204ENST00000506542 TNS4Q8IZW8 715 aa16.37■□□□□ 0.21
SERF1B-204ENST00000506542 LOC285556D6RIA3 1793 aa16.36■□□□□ 0.21
SERF1B-204ENST00000506542 BRCA2P51587 3418 aa16.36■□□□□ 0.21
SERF1B-204ENST00000506542 USP17L5A8MUK1 530 aa16.36■□□□□ 0.21
SERF1B-204ENST00000506542 MINDY4BA8MYZ0 360 aa16.36■□□□□ 0.21
SERF1B-204ENST00000506542 E7EWF7 191 aa16.36■□□□□ 0.21
SERF1B-204ENST00000506542 HSP90AA1P07900 732 aaKnown RBP16.36■□□□□ 0.21
SERF1B-204ENST00000506542 GUCY1A2P33402 732 aa16.36■□□□□ 0.21
SERF1B-204ENST00000506542 PLCB2Q00722 1185 aa16.36■□□□□ 0.21
SERF1B-204ENST00000506542 COL9A3Q14050 684 aaPredicted RBP16.36■□□□□ 0.21
SERF1B-204ENST00000506542 RAB3GAP1Q15042 981 aa16.36■□□□□ 0.21
SERF1B-204ENST00000506542 ZYXQ15942 572 aaKnown RBP16.36■□□□□ 0.21
SERF1B-204ENST00000506542 IFNL3Q8IZI9 196 aa16.36■□□□□ 0.21
SERF1B-204ENST00000506542 TMX3Q96JJ7 454 aa16.36■□□□□ 0.21
SERF1B-204ENST00000506542 ALDH8A1Q9H2A2 487 aaPredicted RBP16.36■□□□□ 0.21
SERF1B-204ENST00000506542 MPHOSPH10O00566 681 aaKnown RBP16.35■□□□□ 0.21
SERF1B-204ENST00000506542 CXCL11O14625 94 aa16.35■□□□□ 0.21
SERF1B-204ENST00000506542 ZNF213O14771 459 aa16.35■□□□□ 0.21
SERF1B-204ENST00000506542 HMGB1P09429 215 aaKnown RBP16.35■□□□□ 0.21
SERF1B-204ENST00000506542 HAND2P61296 217 aa16.35■□□□□ 0.21
SERF1B-204ENST00000506542 SEPT2Q15019 361 aa16.35■□□□□ 0.21
SERF1B-204ENST00000506542 ABCB5Q2M3G0 1257 aa16.35■□□□□ 0.21
SERF1B-204ENST00000506542 ZNF280CQ8ND82 737 aa16.35■□□□□ 0.21
SERF1B-204ENST00000506542 ACER1Q8TDN7 264 aa16.35■□□□□ 0.21
SERF1B-204ENST00000506542 NACAP1Q9BZK3 213 aa16.35■□□□□ 0.21
SERF1B-204ENST00000506542 ALDH1A1P00352 501 aa16.34■□□□□ 0.21
SERF1B-204ENST00000506542 ASNSP08243 561 aa16.34■□□□□ 0.21
SERF1B-204ENST00000506542 AKR1B1P15121 316 aa16.34■□□□□ 0.21
SERF1B-204ENST00000506542 TDO2P48775 406 aa16.34■□□□□ 0.21
SERF1B-204ENST00000506542 CDK8P49336 464 aa16.34■□□□□ 0.21
SERF1B-204ENST00000506542 OTUD7BQ6GQQ9 843 aa16.34■□□□□ 0.21
SERF1B-204ENST00000506542 NOL8Q76FK4 1167 aaKnown RBP16.34■□□□□ 0.21
SERF1B-204ENST00000506542 NAPBQ9H115 298 aa16.34■□□□□ 0.21
SERF1B-204ENST00000506542 INCENPQ9NQS7 918 aa16.34■□□□□ 0.21
SERF1B-204ENST00000506542 CPA4Q9UI42 421 aa16.34■□□□□ 0.21
SERF1B-204ENST00000506542 LIMCH1Q9UPQ0 1083 aa16.34■□□□□ 0.21
SERF1B-204ENST00000506542 PEX10O60683 326 aa16.34■□□□□ 0.21
SERF1B-204ENST00000506542 PRDM1O75626 825 aa16.34■□□□□ 0.21
SERF1B-204ENST00000506542 DDIT3P35638 169 aa16.34■□□□□ 0.21
SERF1B-204ENST00000506542 CFHR5Q9BXR6 569 aa16.34■□□□□ 0.21
SERF1B-204ENST00000506542 NBPF3Q9H094 633 aa16.34■□□□□ 0.21
SERF1B-204ENST00000506542 CUL4AQ13619 759 aa16.33■□□□□ 0.2
SERF1B-204ENST00000506542 DHX32Q7L7V1 743 aaKnown RBP16.33■□□□□ 0.2
SERF1B-204ENST00000506542 ANKRD23Q86SG2 305 aa16.33■□□□□ 0.2
SERF1B-204ENST00000506542 CD99L2Q8TCZ2 262 aa16.33■□□□□ 0.2
SERF1B-204ENST00000506542 ARHGAP39Q9C0H5 1083 aa16.33■□□□□ 0.2
SERF1B-204ENST00000506542 TACC3Q9Y6A5 838 aa16.33■□□□□ 0.2
SERF1B-204ENST00000506542 CAPN15O75808 1086 aa16.32■□□□□ 0.2
SERF1B-204ENST00000506542 ANKRD1Q15327 319 aa16.32■□□□□ 0.2
SERF1B-204ENST00000506542 C16orf86Q6ZW13 317 aa16.32■□□□□ 0.2
SERF1B-204ENST00000506542 TCEANC2Q96MN5 208 aa16.32■□□□□ 0.2
SERF1B-204ENST00000506542 ARPP21Q9UBL0 812 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms