RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 PCDHB10Q9UN67 800 aa8.93□□□□□ -0.98
HERC4-213ENST00000506515 CDK11AQ9UQ88 783 aaPredicted RBP8.93□□□□□ -0.98
HERC4-213ENST00000506515 B2RBV5 119 aa8.92□□□□□ -0.98
HERC4-213ENST00000506515 CDK5R2Q13319 367 aa8.92□□□□□ -0.98
HERC4-213ENST00000506515 NFE2L2Q16236 605 aa8.92□□□□□ -0.98
HERC4-213ENST00000506515 C6orf15Q6UXA7 325 aaPredicted RBP8.92□□□□□ -0.98
HERC4-213ENST00000506515 MIPEPQ99797 713 aa8.92□□□□□ -0.98
HERC4-213ENST00000506515 MAPK8IP1Q9UQF2 711 aa8.92□□□□□ -0.98
HERC4-213ENST00000506515 UBOX5O94941 541 aa8.91□□□□□ -0.98
HERC4-213ENST00000506515 GJB6O95452 261 aa8.91□□□□□ -0.98
HERC4-213ENST00000506515 GATA4P43694 442 aa8.91□□□□□ -0.98
HERC4-213ENST00000506515 CHMP4BP1P59074 171 aa8.91□□□□□ -0.98
HERC4-213ENST00000506515 PAOXQ6QHF9 649 aa8.91□□□□□ -0.98
HERC4-213ENST00000506515 VHLLQ6RSH7 139 aa8.91□□□□□ -0.98
HERC4-213ENST00000506515 TMEM192Q8IY95 271 aa8.91□□□□□ -0.98
HERC4-213ENST00000506515 TP53INP1Q96A56 240 aa8.91□□□□□ -0.98
HERC4-213ENST00000506515 MRFAP1L1Q96HT8 127 aa8.91□□□□□ -0.98
HERC4-213ENST00000506515 SLC6A18Q96N87 628 aa8.91□□□□□ -0.98
HERC4-213ENST00000506515 SSBP4Q9BWG4 385 aaPredicted RBP8.91□□□□□ -0.98
HERC4-213ENST00000506515 CCNFP41002 786 aa8.9□□□□□ -0.98
HERC4-213ENST00000506515 LETMD1Q6P1Q0 360 aa8.9□□□□□ -0.98
HERC4-213ENST00000506515 GIMAP6Q6P9H5 292 aa8.9□□□□□ -0.98
HERC4-213ENST00000506515 SEZ6L2Q6UXD5 910 aa8.9□□□□□ -0.98
HERC4-213ENST00000506515 NOP9Q86U38 636 aaKnown RBP8.9□□□□□ -0.98
HERC4-213ENST00000506515 CDH24Q86UP0 819 aa8.9□□□□□ -0.98
HERC4-213ENST00000506515 FAM178BQ8IXR5 827 aa8.9□□□□□ -0.98
HERC4-213ENST00000506515 RIN3Q8TB24 985 aa8.9□□□□□ -0.98
HERC4-213ENST00000506515 MKL1Q969V6 931 aa8.9□□□□□ -0.98
HERC4-213ENST00000506515 DEPDC7Q96QD5 511 aa8.9□□□□□ -0.98
HERC4-213ENST00000506515 PHAXQ9H814 394 aaKnown RBP8.9□□□□□ -0.98
HERC4-213ENST00000506515 PRDM10Q9NQV6 1147 aa8.9□□□□□ -0.98
HERC4-213ENST00000506515 C1GALT1Q9NS00 363 aa8.9□□□□□ -0.98
HERC4-213ENST00000506515 FAM86C1Q9NVL1 165 aa8.9□□□□□ -0.98
HERC4-213ENST00000506515 SNTG2Q9NY99 539 aa8.9□□□□□ -0.98
HERC4-213ENST00000506515 SLITRK5O94991 958 aa8.89□□□□□ -0.99
HERC4-213ENST00000506515 RASSF7Q02833 373 aa8.89□□□□□ -0.99
HERC4-213ENST00000506515 GNPTABQ3T906 1256 aa8.89□□□□□ -0.99
HERC4-213ENST00000506515 CLEC10AQ8IUN9 316 aa8.89□□□□□ -0.99
HERC4-213ENST00000506515 TOP6BLQ8N6T0 577 aa8.89□□□□□ -0.99
HERC4-213ENST00000506515 PPP1R13LQ8WUF5 828 aa8.89□□□□□ -0.99
HERC4-213ENST00000506515 ZNF512BQ96KM6 892 aaPredicted RBP8.89□□□□□ -0.99
HERC4-213ENST00000506515 DHRS1Q96LJ7 313 aa8.89□□□□□ -0.99
HERC4-213ENST00000506515 PSMG3-AS1Q96PY0 264 aa8.89□□□□□ -0.99
HERC4-213ENST00000506515 CEP131Q9UPN4 1083 aa8.89□□□□□ -0.99
HERC4-213ENST00000506515 FAM221BA6H8Z2 402 aa8.88□□□□□ -0.99
HERC4-213ENST00000506515 SMARCA5O60264 1052 aaPredicted RBP8.88□□□□□ -0.99
HERC4-213ENST00000506515 CLEC3AO75596 197 aa8.88□□□□□ -0.99
HERC4-213ENST00000506515 SLC7A5Q01650 507 aa8.88□□□□□ -0.99
HERC4-213ENST00000506515 RASA3Q14644 834 aa8.88□□□□□ -0.99
HERC4-213ENST00000506515 TDRD10Q5VZ19 366 aaKnown RBP8.88□□□□□ -0.99
HERC4-213ENST00000506515 KIAA1211LQ6NV74 962 aa8.88□□□□□ -0.99
HERC4-213ENST00000506515 FAM83CQ9BQN1 747 aa8.88□□□□□ -0.99
HERC4-213ENST00000506515 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.88□□□□□ -0.99
HERC4-213ENST00000506515 SUCOQ9UBS9 1254 aaKnown RBP8.88□□□□□ -0.99
HERC4-213ENST00000506515 ZNF214Q9UL59 606 aaPredicted RBP8.88□□□□□ -0.99
HERC4-213ENST00000506515 MSRB2Q9Y3D2 182 aa8.88□□□□□ -0.99
HERC4-213ENST00000506515 HMX2A2RU54 273 aa8.87□□□□□ -0.99
HERC4-213ENST00000506515 TP53P04637 393 aaPredicted RBP8.87□□□□□ -0.99
HERC4-213ENST00000506515 KCNMA1Q12791 1236 aa8.87□□□□□ -0.99
HERC4-213ENST00000506515 DNAJB8Q8NHS0 232 aa8.87□□□□□ -0.99
HERC4-213ENST00000506515 CCDC113Q9H0I3 377 aa8.87□□□□□ -0.99
HERC4-213ENST00000506515 STOML1Q9UBI4 398 aa8.87□□□□□ -0.99
HERC4-213ENST00000506515 RAXQ9Y2V3 346 aa8.87□□□□□ -0.99
HERC4-213ENST00000506515 PDPK1O15530 556 aa8.86□□□□□ -0.99
HERC4-213ENST00000506515 LEFTY1O75610 366 aa8.86□□□□□ -0.99
HERC4-213ENST00000506515 PMS1P54277 932 aaKnown RBP8.86□□□□□ -0.99
HERC4-213ENST00000506515 PPFIBP1Q86W92 1011 aa8.86□□□□□ -0.99
HERC4-213ENST00000506515 GIMAP7Q8NHV1 300 aa8.86□□□□□ -0.99
HERC4-213ENST00000506515 KLHL6Q8WZ60 621 aa8.86□□□□□ -0.99
HERC4-213ENST00000506515 TBC1D32Q96NH3 1257 aa8.86□□□□□ -0.99
HERC4-213ENST00000506515 C7orf69Q9H7B7 122 aa8.86□□□□□ -0.99
HERC4-213ENST00000506515 TPX2Q9ULW0 747 aaKnown RBP8.86□□□□□ -0.99
HERC4-213ENST00000506515 CCDC180Q9P1Z9 1646 aa8.85□□□□□ -0.99
HERC4-213ENST00000506515 C9IYK1 514 aa8.85□□□□□ -0.99
HERC4-213ENST00000506515 FAM87AP0C7U9 286 aa8.85□□□□□ -0.99
HERC4-213ENST00000506515 GSK3AP49840 483 aa8.85□□□□□ -0.99
HERC4-213ENST00000506515 NCAPHQ15003 741 aa8.85□□□□□ -0.99
HERC4-213ENST00000506515 BBS9Q3SYG4 887 aa8.85□□□□□ -0.99
HERC4-213ENST00000506515 MRM1Q6IN84 353 aaKnown RBP8.85□□□□□ -0.99
HERC4-213ENST00000506515 KREMEN1Q96MU8 473 aa8.85□□□□□ -0.99
HERC4-213ENST00000506515 DUSP23Q9BVJ7 150 aa8.85□□□□□ -0.99
HERC4-213ENST00000506515 MKRN2Q9H000 416 aaKnown RBP8.85□□□□□ -0.99
HERC4-213ENST00000506515 RBAK-RBAKDNI3L0D1 243 aa8.84□□□□□ -0.99
HERC4-213ENST00000506515 GDF11O95390 407 aa8.84□□□□□ -0.99
HERC4-213ENST00000506515 ADMP35318 185 aa8.84□□□□□ -0.99
HERC4-213ENST00000506515 ETV3P41162 512 aa8.84□□□□□ -0.99
HERC4-213ENST00000506515 IFRD2Q12894 506 aaPredicted RBP8.84□□□□□ -0.99
HERC4-213ENST00000506515 PLA2G4EQ3MJ16 856 aa8.84□□□□□ -0.99
HERC4-213ENST00000506515 ZNF746Q6NUN9 644 aaPredicted RBP8.84□□□□□ -0.99
HERC4-213ENST00000506515 PRR23CQ6ZRP0 262 aa8.84□□□□□ -0.99
HERC4-213ENST00000506515 LRP10Q7Z4F1 713 aa8.84□□□□□ -0.99
HERC4-213ENST00000506515 CCDC144CPQ8IYA2 1237 aa8.84□□□□□ -0.99
HERC4-213ENST00000506515 EOMESO95936 686 aa8.83□□□□□ -1
HERC4-213ENST00000506515 RASGRF1Q13972 1273 aa8.83□□□□□ -1
HERC4-213ENST00000506515 NBPF12Q5TAG4 269 aaPredicted RBP8.83□□□□□ -1
HERC4-213ENST00000506515 EEPD1Q7L9B9 569 aa8.83□□□□□ -1
HERC4-213ENST00000506515 FBXL6Q8N531 539 aa8.83□□□□□ -1
HERC4-213ENST00000506515 MFSD14AQ96MC6 490 aa8.83□□□□□ -1
HERC4-213ENST00000506515 DNAJC7Q99615 494 aa8.83□□□□□ -1
HERC4-213ENST00000506515 TPSG1Q9NRR2 321 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms