RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 CTU1Q7Z7A3 348 aaKnown RBP19.88■□□□□ 0.77
SNCA-209ENST00000506244 SMCR8Q8TEV9 937 aaPredicted RBP19.88■□□□□ 0.77
SNCA-209ENST00000506244 RAD50Q92878 1312 aa19.87■□□□□ 0.77
SNCA-209ENST00000506244 AKR1B1P15121 316 aa19.87■□□□□ 0.77
SNCA-209ENST00000506244 ICA1Q05084 483 aa19.87■□□□□ 0.77
SNCA-209ENST00000506244 PPARAQ07869 468 aa19.87■□□□□ 0.77
SNCA-209ENST00000506244 SEPT2Q15019 361 aa19.87■□□□□ 0.77
SNCA-209ENST00000506244 ARHGEF6Q15052 776 aa19.87■□□□□ 0.77
SNCA-209ENST00000506244 ALX1Q15699 326 aa19.87■□□□□ 0.77
SNCA-209ENST00000506244 CWC27Q6UX04 472 aaKnown RBP19.87■□□□□ 0.77
SNCA-209ENST00000506244 KIAA1683Q9H0B3 1180 aa19.87■□□□□ 0.77
SNCA-209ENST00000506244 ARHGEF10LQ9HCE6 1279 aa19.87■□□□□ 0.77
SNCA-209ENST00000506244 ADGRA2Q96PE1 1338 aa19.86■□□□□ 0.77
SNCA-209ENST00000506244 OSBPP22059 807 aa19.86■□□□□ 0.77
SNCA-209ENST00000506244 TREML2Q5T2D2 321 aa19.86■□□□□ 0.77
SNCA-209ENST00000506244 ZNF589Q86UQ0 364 aaPredicted RBP19.86■□□□□ 0.77
SNCA-209ENST00000506244 RUFY2Q8WXA3 655 aa19.86■□□□□ 0.77
SNCA-209ENST00000506244 C12orf42Q96LP6 360 aa19.86■□□□□ 0.77
SNCA-209ENST00000506244 FOXP2O15409 715 aa19.85■□□□□ 0.77
SNCA-209ENST00000506244 HSPD1P10809 573 aaKnown RBP19.85■□□□□ 0.77
SNCA-209ENST00000506244 GUCY1A2P33402 732 aa19.85■□□□□ 0.77
SNCA-209ENST00000506244 IRX3P78415 501 aaPredicted RBP19.85■□□□□ 0.77
SNCA-209ENST00000506244 DGKZQ13574 1117 aa19.85■□□□□ 0.77
SNCA-209ENST00000506244 KIF22Q14807 665 aa19.85■□□□□ 0.77
SNCA-209ENST00000506244 PKN2Q16513 984 aaKnown RBP19.85■□□□□ 0.77
SNCA-209ENST00000506244 VPS53Q5VIR6 699 aa19.85■□□□□ 0.77
SNCA-209ENST00000506244 KANSL2Q9H9L4 492 aa19.85■□□□□ 0.77
SNCA-209ENST00000506244 SMIM22K7EJ46 135 aa19.84■□□□□ 0.77
SNCA-209ENST00000506244 CYP2C8P10632 490 aa19.84■□□□□ 0.77
SNCA-209ENST00000506244 RASA1P20936 1047 aa19.84■□□□□ 0.77
SNCA-209ENST00000506244 C17orf99Q6UX52 265 aa19.84■□□□□ 0.77
SNCA-209ENST00000506244 ZNF444Q8N0Y2 327 aaPredicted RBP19.84■□□□□ 0.77
SNCA-209ENST00000506244 ANAPC4Q9UJX5 808 aa19.84■□□□□ 0.77
SNCA-209ENST00000506244 GREB1LQ9C091 1923 aaPredicted RBP19.84■□□□□ 0.77
SNCA-209ENST00000506244 HOXA7P31268 230 aaPredicted RBP19.83■□□□□ 0.77
SNCA-209ENST00000506244 GCLCP48506 637 aaPredicted RBP19.83■□□□□ 0.77
SNCA-209ENST00000506244 ZYXQ15942 572 aaKnown RBP19.83■□□□□ 0.77
SNCA-209ENST00000506244 STK11IPQ8N1F8 1099 aa19.83■□□□□ 0.77
SNCA-209ENST00000506244 GTF3C2Q8WUA4 911 aaPredicted RBP19.83■□□□□ 0.77
SNCA-209ENST00000506244 CPA4Q9UI42 421 aa19.83■□□□□ 0.77
SNCA-209ENST00000506244 PLIN4Q96Q06 1357 aa19.83■□□□□ 0.76
SNCA-209ENST00000506244 PPP4R3BQ5MIZ7 849 aa19.82■□□□□ 0.76
SNCA-209ENST00000506244 CD99L2Q8TCZ2 262 aa19.82■□□□□ 0.76
SNCA-209ENST00000506244 ACER1Q8TDN7 264 aa19.82■□□□□ 0.76
SNCA-209ENST00000506244 LPAR1Q92633 364 aa19.82■□□□□ 0.76
SNCA-209ENST00000506244 MCOLN1Q9GZU1 580 aa19.82■□□□□ 0.76
SNCA-209ENST00000506244 ASCC2Q9H1I8 757 aaPredicted RBP19.82■□□□□ 0.76
SNCA-209ENST00000506244 EMILIN3Q9NT22 766 aa19.82■□□□□ 0.76
SNCA-209ENST00000506244 FGAP02671 866 aa19.81■□□□□ 0.76
SNCA-209ENST00000506244 TSPY3P0CV98 308 aa19.81■□□□□ 0.76
SNCA-209ENST00000506244 TSPY8P0CW00 308 aa19.81■□□□□ 0.76
SNCA-209ENST00000506244 PCP11498 1178 aaKnown RBP19.81■□□□□ 0.76
SNCA-209ENST00000506244 VCAM1P19320 739 aa19.81■□□□□ 0.76
SNCA-209ENST00000506244 LACTBP83111 547 aaPredicted RBP19.81■□□□□ 0.76
SNCA-209ENST00000506244 DSCC1Q9BVC3 393 aa19.81■□□□□ 0.76
SNCA-209ENST00000506244 EFCC1Q9HA90 598 aa19.81■□□□□ 0.76
SNCA-209ENST00000506244 LAMA4Q16363 1823 aa19.81■□□□□ 0.76
SNCA-209ENST00000506244 USP17L15C9J2P7 530 aa19.8■□□□□ 0.76
SNCA-209ENST00000506244 USP17L13C9JLJ4 530 aa19.8■□□□□ 0.76
SNCA-209ENST00000506244 USP17L11C9JVI0 530 aa19.8■□□□□ 0.76
SNCA-209ENST00000506244 USP17L18D6R9N7 530 aa19.8■□□□□ 0.76
SNCA-209ENST00000506244 USP17L22D6RA61 530 aa19.8■□□□□ 0.76
SNCA-209ENST00000506244 USP17L17D6RBQ6 530 aa19.8■□□□□ 0.76
SNCA-209ENST00000506244 USP17L19D6RCP7 530 aa19.8■□□□□ 0.76
SNCA-209ENST00000506244 USP17L20D6RJB6 530 aa19.8■□□□□ 0.76
SNCA-209ENST00000506244 PRDM1O75626 825 aa19.8■□□□□ 0.76
SNCA-209ENST00000506244 GNRH1P01148 92 aa19.8■□□□□ 0.76
SNCA-209ENST00000506244 BCRP11274 1271 aa19.8■□□□□ 0.76
SNCA-209ENST00000506244 CHMLP26374 656 aa19.8■□□□□ 0.76
SNCA-209ENST00000506244 ATP2B2Q01814 1243 aa19.8■□□□□ 0.76
SNCA-209ENST00000506244 USP17L24Q0WX57 530 aa19.8■□□□□ 0.76
SNCA-209ENST00000506244 FAM110CQ1W6H9 321 aa19.8■□□□□ 0.76
SNCA-209ENST00000506244 BMP2KLQ5H9B9 411 aa19.8■□□□□ 0.76
SNCA-209ENST00000506244 GOPCQ9HD26 462 aa19.8■□□□□ 0.76
SNCA-209ENST00000506244 TMX2Q9Y320 296 aa19.8■□□□□ 0.76
SNCA-209ENST00000506244 TRIM17Q9Y577 477 aa19.8■□□□□ 0.76
SNCA-209ENST00000506244 ORC4O43929 436 aa19.79■□□□□ 0.76
SNCA-209ENST00000506244 EEF2P13639 858 aaKnown RBP19.79■□□□□ 0.76
SNCA-209ENST00000506244 NT5C2P49902 561 aa19.79■□□□□ 0.76
SNCA-209ENST00000506244 CTDSPL2Q05D32 466 aa19.79■□□□□ 0.76
SNCA-209ENST00000506244 OTOP1Q7RTM1 612 aa19.79■□□□□ 0.76
SNCA-209ENST00000506244 CLEC10AQ8IUN9 316 aa19.79■□□□□ 0.76
SNCA-209ENST00000506244 RNF41Q9H4P4 317 aaPredicted RBP19.79■□□□□ 0.76
SNCA-209ENST00000506244 VCPKMTQ9H867 229 aa19.79■□□□□ 0.76
SNCA-209ENST00000506244 PPP4R2Q9NY27 417 aa19.79■□□□□ 0.76
SNCA-209ENST00000506244 CTNNA3Q9UI47 895 aa19.79■□□□□ 0.76
SNCA-209ENST00000506244 SYNPO2Q9UMS6 1093 aa19.79■□□□□ 0.76
SNCA-209ENST00000506244 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.79■□□□□ 0.76
SNCA-209ENST00000506244 A0A1W2PRG0 241 aa19.78■□□□□ 0.76
SNCA-209ENST00000506244 FBXO46Q6PJ61 603 aaPredicted RBP19.78■□□□□ 0.76
SNCA-209ENST00000506244 NYAP2Q9P242 653 aa19.78■□□□□ 0.76
SNCA-209ENST00000506244 TSPY2A6NKD2 308 aa19.77■□□□□ 0.76
SNCA-209ENST00000506244 FCGRTP55899 365 aa19.77■□□□□ 0.76
SNCA-209ENST00000506244 HERVK_113P62684 666 aa19.77■□□□□ 0.76
SNCA-209ENST00000506244 IMMTQ16891 758 aaKnown RBP19.77■□□□□ 0.76
SNCA-209ENST00000506244 ANKRD13CQ8N6S4 541 aa19.77■□□□□ 0.76
SNCA-209ENST00000506244 NEDD1Q8NHV4 660 aa19.77■□□□□ 0.76
SNCA-209ENST00000506244 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.77■□□□□ 0.76
SNCA-209ENST00000506244 RPAP3Q9H6T3 665 aaPredicted RBP19.77■□□□□ 0.76
SNCA-209ENST00000506244 TOMM22Q9NS69 142 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms