RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 TCP10L2B9ZVM9 353 aa13.97□□□□□ -0.17
POLR2J3-211ENST00000506060 DEXIO95424 95 aa13.97□□□□□ -0.17
POLR2J3-211ENST00000506060 NCLP19338 710 aaKnown RBP13.97□□□□□ -0.17
POLR2J3-211ENST00000506060 RXRAP19793 462 aa13.97□□□□□ -0.17
POLR2J3-211ENST00000506060 CDC27P30260 824 aa13.97□□□□□ -0.17
POLR2J3-211ENST00000506060 GMPSP49915 693 aaPredicted RBP13.97□□□□□ -0.17
POLR2J3-211ENST00000506060 CACNB3P54284 484 aa13.97□□□□□ -0.17
POLR2J3-211ENST00000506060 TROAPQ12815 778 aa13.97□□□□□ -0.17
POLR2J3-211ENST00000506060 MCTP1Q6DN14 999 aa13.97□□□□□ -0.17
POLR2J3-211ENST00000506060 ZBED3Q96IU2 234 aaPredicted RBP13.97□□□□□ -0.17
POLR2J3-211ENST00000506060 CSRNP1Q96S65 589 aa13.97□□□□□ -0.17
POLR2J3-211ENST00000506060 SLC26A6Q9BXS9 759 aa13.97□□□□□ -0.17
POLR2J3-211ENST00000506060 RNF26Q9BY78 433 aaPredicted RBP13.97□□□□□ -0.17
POLR2J3-211ENST00000506060 VEZTQ9HBM0 779 aa13.97□□□□□ -0.17
POLR2J3-211ENST00000506060 PCDHAC2Q9Y5I4 1007 aa13.97□□□□□ -0.17
POLR2J3-211ENST00000506060 CLRN2A0PK11 232 aa13.96□□□□□ -0.17
POLR2J3-211ENST00000506060 DDTLA6NHG4 134 aaPredicted RBP13.96□□□□□ -0.17
POLR2J3-211ENST00000506060 MPHOSPH10O00566 681 aaKnown RBP13.96□□□□□ -0.17
POLR2J3-211ENST00000506060 NMT2O60551 498 aa13.96□□□□□ -0.17
POLR2J3-211ENST00000506060 TTLL1O95922 423 aa13.96□□□□□ -0.17
POLR2J3-211ENST00000506060 NTRK3Q16288 839 aa13.96□□□□□ -0.17
POLR2J3-211ENST00000506060 CERKLQ49MI3 558 aaPredicted RBP13.96□□□□□ -0.17
POLR2J3-211ENST00000506060 ATL3Q6DD88 541 aa13.96□□□□□ -0.17
POLR2J3-211ENST00000506060 RCSD1Q6JBY9 416 aa13.96□□□□□ -0.17
POLR2J3-211ENST00000506060 METTL16Q86W50 562 aaKnown RBP13.96□□□□□ -0.17
POLR2J3-211ENST00000506060 MICALL2Q8IY33 904 aa13.96□□□□□ -0.17
POLR2J3-211ENST00000506060 GPC2Q8N158 579 aa13.96□□□□□ -0.17
POLR2J3-211ENST00000506060 HOOK2Q96ED9 719 aa13.96□□□□□ -0.17
POLR2J3-211ENST00000506060 ALG1Q9BT22 464 aa13.96□□□□□ -0.17
POLR2J3-211ENST00000506060 CABP5Q9NP86 173 aa13.96□□□□□ -0.17
POLR2J3-211ENST00000506060 IL17RBQ9NRM6 502 aa13.96□□□□□ -0.17
POLR2J3-211ENST00000506060 FAM217BQ9NTX9 383 aaPredicted RBP13.96□□□□□ -0.17
POLR2J3-211ENST00000506060 CNOT7Q9UIV1 285 aaKnown RBP13.96□□□□□ -0.17
POLR2J3-211ENST00000506060 WNT10BO00744 389 aa13.95□□□□□ -0.18
POLR2J3-211ENST00000506060 SHMT1P34896 483 aa13.95□□□□□ -0.18
POLR2J3-211ENST00000506060 KRT85P78386 507 aa13.95□□□□□ -0.18
POLR2J3-211ENST00000506060 SAFBQ15424 915 aaKnown RBP eCLIP13.95□□□□□ -0.18
POLR2J3-211ENST00000506060 CDC37L1Q7L3B6 337 aa13.95□□□□□ -0.18
POLR2J3-211ENST00000506060 ZFPM1Q8IX07 1006 aa13.95□□□□□ -0.18
POLR2J3-211ENST00000506060 FBXO18Q8NFZ0 1043 aa13.95□□□□□ -0.18
POLR2J3-211ENST00000506060 TMEM47Q9BQJ4 181 aa13.95□□□□□ -0.18
POLR2J3-211ENST00000506060 KANSL2Q9H9L4 492 aa13.95□□□□□ -0.18
POLR2J3-211ENST00000506060 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.95□□□□□ -0.18
POLR2J3-211ENST00000506060 MTMR4Q9NYA4 1195 aa13.95□□□□□ -0.18
POLR2J3-211ENST00000506060 MYH6P13533 1939 aa13.94□□□□□ -0.18
POLR2J3-211ENST00000506060 PRPF3O43395 683 aaKnown RBP13.94□□□□□ -0.18
POLR2J3-211ENST00000506060 TBC1D12O60347 775 aa13.94□□□□□ -0.18
POLR2J3-211ENST00000506060 SBF1O95248 1867 aa13.94□□□□□ -0.18
POLR2J3-211ENST00000506060 FDPSP14324 419 aaKnown RBP13.94□□□□□ -0.18
POLR2J3-211ENST00000506060 AKR1B1P15121 316 aa13.94□□□□□ -0.18
POLR2J3-211ENST00000506060 NOVP48745 357 aa13.94□□□□□ -0.18
POLR2J3-211ENST00000506060 GNL2Q13823 731 aaKnown RBP13.94□□□□□ -0.18
POLR2J3-211ENST00000506060 GRM4Q14833 912 aa13.94□□□□□ -0.18
POLR2J3-211ENST00000506060 KIF4BQ2VIQ3 1234 aa13.94□□□□□ -0.18
POLR2J3-211ENST00000506060 RBM26Q5T8P6 1007 aaKnown RBP13.94□□□□□ -0.18
POLR2J3-211ENST00000506060 TATDN1Q6P1N9 297 aa13.94□□□□□ -0.18
POLR2J3-211ENST00000506060 TMEM179Q6ZVK1 233 aa13.94□□□□□ -0.18
POLR2J3-211ENST00000506060 TMTC3Q6ZXV5 915 aa13.94□□□□□ -0.18
POLR2J3-211ENST00000506060 BRAPQ7Z569 592 aa13.94□□□□□ -0.18
POLR2J3-211ENST00000506060 PHKBQ93100 1093 aa13.94□□□□□ -0.18
POLR2J3-211ENST00000506060 CEP95Q96GE4 821 aa13.94□□□□□ -0.18
POLR2J3-211ENST00000506060 ZNF396Q96N95 335 aaPredicted RBP13.94□□□□□ -0.18
POLR2J3-211ENST00000506060 CFAP45Q9UL16 551 aa13.94□□□□□ -0.18
POLR2J3-211ENST00000506060 IGKV6D-41A0A0C4DH26 115 aa13.93□□□□□ -0.18
POLR2J3-211ENST00000506060 PARP1P09874 1014 aaKnown RBP13.93□□□□□ -0.18
POLR2J3-211ENST00000506060 SMARCA1P28370 1054 aa13.93□□□□□ -0.18
POLR2J3-211ENST00000506060 LMOD1P29536 600 aaPredicted RBP13.93□□□□□ -0.18
POLR2J3-211ENST00000506060 ABCB5Q2M3G0 1257 aa13.93□□□□□ -0.18
POLR2J3-211ENST00000506060 SH3BP5LQ7L8J4 393 aa13.93□□□□□ -0.18
POLR2J3-211ENST00000506060 APOBEC3FQ8IUX4 373 aaKnown RBP13.93□□□□□ -0.18
POLR2J3-211ENST00000506060 FAM177A1Q8N128 213 aaPredicted RBP13.93□□□□□ -0.18
POLR2J3-211ENST00000506060 SCAND2PQ9GZW5 306 aaPredicted RBP13.93□□□□□ -0.18
POLR2J3-211ENST00000506060 RNF181Q9P0P0 153 aa13.93□□□□□ -0.18
POLR2J3-211ENST00000506060 ZNF541Q9H0D2 1346 aa13.92□□□□□ -0.18
POLR2J3-211ENST00000506060 GRIN3BO60391 1043 aa13.92□□□□□ -0.18
POLR2J3-211ENST00000506060 RESTQ13127 1097 aa13.92□□□□□ -0.18
POLR2J3-211ENST00000506060 NBPF9Q3BBW0 867 aa13.92□□□□□ -0.18
POLR2J3-211ENST00000506060 ASPRV1Q53RT3 343 aa13.92□□□□□ -0.18
POLR2J3-211ENST00000506060 FERMT3Q86UX7 667 aa13.92□□□□□ -0.18
POLR2J3-211ENST00000506060 BRMS1Q9HCU9 246 aa13.92□□□□□ -0.18
POLR2J3-211ENST00000506060 GPRC5DQ9NZD1 345 aa13.92□□□□□ -0.18
POLR2J3-211ENST00000506060 NYAP2Q9P242 653 aa13.92□□□□□ -0.18
POLR2J3-211ENST00000506060 CLIP2Q9UDT6 1046 aa13.92□□□□□ -0.18
POLR2J3-211ENST00000506060 SYNPO2Q9UMS6 1093 aa13.92□□□□□ -0.18
POLR2J3-211ENST00000506060 TRAK2O60296 914 aa13.91□□□□□ -0.18
POLR2J3-211ENST00000506060 MBD3O95983 291 aa13.91□□□□□ -0.18
POLR2J3-211ENST00000506060 PRELPP51888 382 aa13.91□□□□□ -0.18
POLR2J3-211ENST00000506060 FOSBP53539 338 aa13.91□□□□□ -0.18
POLR2J3-211ENST00000506060 GPR162Q16538 588 aa13.91□□□□□ -0.18
POLR2J3-211ENST00000506060 DPY19L2Q6NUT2 758 aa13.91□□□□□ -0.18
POLR2J3-211ENST00000506060 NBPF11Q86T75 865 aa13.91□□□□□ -0.18
POLR2J3-211ENST00000506060 CCDC82Q8N4S0 544 aa13.91□□□□□ -0.18
POLR2J3-211ENST00000506060 TMEM87AQ8NBN3 555 aa13.91□□□□□ -0.18
POLR2J3-211ENST00000506060 GINM1Q9NU53 330 aa13.91□□□□□ -0.18
POLR2J3-211ENST00000506060 SIPA1L1O43166 1804 aa13.91□□□□□ -0.18
POLR2J3-211ENST00000506060 CNTNAP1P78357 1384 aa13.91□□□□□ -0.18
POLR2J3-211ENST00000506060 ZC3H4Q9UPT8 1303 aaKnown RBP13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 GREB1LQ9C091 1923 aaPredicted RBP13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 PALM3A6NDB9 673 aaPredicted RBP13.9□□□□□ -0.18
POLR2J3-211ENST00000506060 DTNBO60941 627 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms