RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 SPATA31A6Q5VVP1 1343 aa15.93■□□□□ 0.14
TCOF1-207ENST00000504761 NF2P35240 595 aa15.93■□□□□ 0.14
TCOF1-207ENST00000504761 CCT6AP40227 531 aaKnown RBP15.93■□□□□ 0.14
TCOF1-207ENST00000504761 ARHGAP27Q6ZUM4 889 aa15.93■□□□□ 0.14
TCOF1-207ENST00000504761 STOX1Q6ZVD7 989 aa15.93■□□□□ 0.14
TCOF1-207ENST00000504761 CYB5R4Q7L1T6 521 aa15.93■□□□□ 0.14
TCOF1-207ENST00000504761 CSRNP1Q96S65 589 aa15.93■□□□□ 0.14
TCOF1-207ENST00000504761 SH2D4AQ9H788 454 aa15.93■□□□□ 0.14
TCOF1-207ENST00000504761 ZKSCAN5Q9Y2L8 839 aa15.93■□□□□ 0.14
TCOF1-207ENST00000504761 NTSR2O95665 410 aa15.93■□□□□ 0.14
TCOF1-207ENST00000504761 ADRA2BP18089 450 aa15.93■□□□□ 0.14
TCOF1-207ENST00000504761 USP17L2Q6R6M4 530 aa15.93■□□□□ 0.14
TCOF1-207ENST00000504761 LRWD1Q9UFC0 647 aa15.93■□□□□ 0.14
TCOF1-207ENST00000504761 NEDD4P46934 1319 aa15.93■□□□□ 0.14
TCOF1-207ENST00000504761 NEMFO60524 1076 aa15.93■□□□□ 0.14
TCOF1-207ENST00000504761 TRMT44Q8IYL2 757 aaKnown RBP15.93■□□□□ 0.14
TCOF1-207ENST00000504761 KIF20BQ96Q89 1820 aa15.93■□□□□ 0.14
TCOF1-207ENST00000504761 NCOA3Q9Y6Q9 1424 aa15.93■□□□□ 0.14
TCOF1-207ENST00000504761 KIF5CO60282 957 aa15.92■□□□□ 0.14
TCOF1-207ENST00000504761 NMT2O60551 498 aa15.92■□□□□ 0.14
TCOF1-207ENST00000504761 SLC16A2P36021 539 aa15.92■□□□□ 0.14
TCOF1-207ENST00000504761 ZNF827Q17R98 1081 aa15.92■□□□□ 0.14
TCOF1-207ENST00000504761 MASTLQ96GX5 879 aa15.92■□□□□ 0.14
TCOF1-207ENST00000504761 TTC14Q96N46 770 aa15.92■□□□□ 0.14
TCOF1-207ENST00000504761 NDUFA8P51970 172 aa15.92■□□□□ 0.14
TCOF1-207ENST00000504761 NOLC1Q14978 699 aaKnown RBP eCLIP15.92■□□□□ 0.14
TCOF1-207ENST00000504761 PPP4R3AQ6IN85 833 aa15.92■□□□□ 0.14
TCOF1-207ENST00000504761 DYMQ7RTS9 669 aa15.92■□□□□ 0.14
TCOF1-207ENST00000504761 KRT25Q7Z3Z0 450 aa15.92■□□□□ 0.14
TCOF1-207ENST00000504761 UBXN4Q92575 508 aa15.92■□□□□ 0.14
TCOF1-207ENST00000504761 RUFY1Q96T51 708 aa15.92■□□□□ 0.14
TCOF1-207ENST00000504761 FAM196BA6NMK8 535 aa15.92■□□□□ 0.14
TCOF1-207ENST00000504761 DDX39AO00148 427 aaKnown RBP15.92■□□□□ 0.14
TCOF1-207ENST00000504761 GPSM2P81274 684 aa15.92■□□□□ 0.14
TCOF1-207ENST00000504761 PRR5LQ6MZQ0 368 aa15.92■□□□□ 0.14
TCOF1-207ENST00000504761 CPVLQ9H3G5 476 aa15.92■□□□□ 0.14
TCOF1-207ENST00000504761 ZSWIM4Q9H7M6 989 aa15.92■□□□□ 0.14
TCOF1-207ENST00000504761 UTYO14607 1347 aa15.92■□□□□ 0.14
TCOF1-207ENST00000504761 A0A0G2JLW4 131 aa15.92■□□□□ 0.14
TCOF1-207ENST00000504761 LZTS2Q9BRK4 669 aa15.92■□□□□ 0.14
TCOF1-207ENST00000504761 GSG1L2A8MUP6 293 aa15.91■□□□□ 0.14
TCOF1-207ENST00000504761 PDE4DQ08499 809 aa15.91■□□□□ 0.14
TCOF1-207ENST00000504761 KCTD1Q719H9 257 aa15.91■□□□□ 0.14
TCOF1-207ENST00000504761 FAM114A1Q8IWE2 563 aa15.91■□□□□ 0.14
TCOF1-207ENST00000504761 SNX29Q8TEQ0 813 aa15.91■□□□□ 0.14
TCOF1-207ENST00000504761 H7C1D1 291 aa15.91■□□□□ 0.14
TCOF1-207ENST00000504761 ARID5AQ03989 594 aa15.91■□□□□ 0.14
TCOF1-207ENST00000504761 HSP90B2PQ58FF3 399 aa15.91■□□□□ 0.14
TCOF1-207ENST00000504761 SV2BQ7L1I2 683 aa15.91■□□□□ 0.14
TCOF1-207ENST00000504761 TMC4Q7Z404 712 aa15.91■□□□□ 0.14
TCOF1-207ENST00000504761 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.91■□□□□ 0.14
TCOF1-207ENST00000504761 MYCLP12524 364 aaPredicted RBP15.91■□□□□ 0.14
TCOF1-207ENST00000504761 GNG11P61952 73 aa15.91■□□□□ 0.14
TCOF1-207ENST00000504761 SNW1Q13573 536 aaKnown RBP15.91■□□□□ 0.14
TCOF1-207ENST00000504761 SLFN13Q68D06 897 aa15.91■□□□□ 0.14
TCOF1-207ENST00000504761 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.91■□□□□ 0.14
TCOF1-207ENST00000504761 UBR1Q8IWV7 1749 aa15.91■□□□□ 0.14
TCOF1-207ENST00000504761 CHRNA5P30532 468 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 PLCD1P51178 756 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 SPAG1Q07617 926 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 PTGDRQ13258 359 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 POSTNQ15063 836 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 SLC27A3Q5K4L6 730 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 VPS16Q9H269 839 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 AKR1B10O60218 316 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 NCAPH2Q6IBW4 605 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 C17orf53Q8N3J3 647 aaPredicted RBP15.9■□□□□ 0.14
TCOF1-207ENST00000504761 CCDC150Q8NCX0 1101 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 CTNND2Q9UQB3 1225 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 DDAH1O94760 285 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 CALCRLQ16602 461 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 ABCB5Q2M3G0 1257 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 BICD1Q96G01 975 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 COA1Q9GZY4 146 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 DCP1AQ9NPI6 582 aaPredicted RBP15.9■□□□□ 0.14
TCOF1-207ENST00000504761 ZNF609O15014 1411 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 TMEM232C9JQI7 657 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 WDHD1O75717 1129 aaPredicted RBP15.9■□□□□ 0.14
TCOF1-207ENST00000504761 PLEKHA8P1O95397 391 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 IFNAR1P17181 557 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 SSR1P43307 286 aaKnown RBP15.9■□□□□ 0.14
TCOF1-207ENST00000504761 KIF23Q02241 960 aaPredicted RBP15.9■□□□□ 0.14
TCOF1-207ENST00000504761 MIGA2Q7L4E1 593 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 MAEAQ7L5Y9 396 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 TTLL6Q8N841 843 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 NFE2L3Q9Y4A8 694 aa15.9■□□□□ 0.14
TCOF1-207ENST00000504761 BACH1O14867 736 aa15.89■□□□□ 0.13
TCOF1-207ENST00000504761 CDC25AP30304 524 aa15.89■□□□□ 0.13
TCOF1-207ENST00000504761 LIFRP42702 1097 aa15.89■□□□□ 0.13
TCOF1-207ENST00000504761 UBXN1Q04323 297 aa15.89■□□□□ 0.13
TCOF1-207ENST00000504761 SF3B3Q15393 1217 aaKnown RBP15.89■□□□□ 0.13
TCOF1-207ENST00000504761 CNKSR2Q8WXI2 1034 aa15.89■□□□□ 0.13
TCOF1-207ENST00000504761 TBC1D7Q9P0N9 293 aa15.89■□□□□ 0.13
TCOF1-207ENST00000504761 GPIHBP1Q8IV16 184 aa15.89■□□□□ 0.13
TCOF1-207ENST00000504761 PGBD1Q96JS3 809 aa15.89■□□□□ 0.13
TCOF1-207ENST00000504761 SPAG5Q96R06 1193 aa15.89■□□□□ 0.13
TCOF1-207ENST00000504761 PSTPIP2Q9H939 334 aa15.89■□□□□ 0.13
TCOF1-207ENST00000504761 KIAA1468Q9P260 1216 aa15.89■□□□□ 0.13
TCOF1-207ENST00000504761 FAM13AO94988 1023 aa15.89■□□□□ 0.13
TCOF1-207ENST00000504761 TECP42680 631 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms