RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 RXRAP19793 462 aa13.9□□□□□ -0.18
POLR2J3-210ENST00000504677 CDC27P30260 824 aa13.9□□□□□ -0.18
POLR2J3-210ENST00000504677 ADD1P35611 737 aaKnown RBP13.9□□□□□ -0.18
POLR2J3-210ENST00000504677 GNAQP50148 359 aa13.9□□□□□ -0.18
POLR2J3-210ENST00000504677 SSRP1Q08945 709 aaKnown RBP13.9□□□□□ -0.18
POLR2J3-210ENST00000504677 NTRK3Q16288 839 aa13.9□□□□□ -0.18
POLR2J3-210ENST00000504677 RAB11FIP4Q86YS3 637 aa13.9□□□□□ -0.18
POLR2J3-210ENST00000504677 MICALL2Q8IY33 904 aa13.9□□□□□ -0.18
POLR2J3-210ENST00000504677 PNMA1Q8ND90 353 aa13.9□□□□□ -0.18
POLR2J3-210ENST00000504677 VEZTQ9HBM0 779 aa13.9□□□□□ -0.18
POLR2J3-210ENST00000504677 FAM217BQ9NTX9 383 aaPredicted RBP13.9□□□□□ -0.18
POLR2J3-210ENST00000504677 RBM27Q9P2N5 1060 aaKnown RBP13.9□□□□□ -0.18
POLR2J3-210ENST00000504677 CNTNAP1P78357 1384 aa13.89□□□□□ -0.19
POLR2J3-210ENST00000504677 IGKV6D-41A0A0C4DH26 115 aa13.89□□□□□ -0.19
POLR2J3-210ENST00000504677 TCP10L2B9ZVM9 353 aa13.89□□□□□ -0.19
POLR2J3-210ENST00000504677 H7C1D1 291 aa13.89□□□□□ -0.19
POLR2J3-210ENST00000504677 FDPSP14324 419 aaKnown RBP13.89□□□□□ -0.19
POLR2J3-210ENST00000504677 TATDN1Q6P1N9 297 aa13.89□□□□□ -0.19
POLR2J3-210ENST00000504677 SH3BP5LQ7L8J4 393 aa13.89□□□□□ -0.19
POLR2J3-210ENST00000504677 ZFPM1Q8IX07 1006 aa13.89□□□□□ -0.19
POLR2J3-210ENST00000504677 CCDC144CPQ8IYA2 1237 aa13.89□□□□□ -0.19
POLR2J3-210ENST00000504677 CSRNP1Q96S65 589 aa13.89□□□□□ -0.19
POLR2J3-210ENST00000504677 RNF26Q9BY78 433 aaPredicted RBP13.89□□□□□ -0.19
POLR2J3-210ENST00000504677 ZSCAN16Q9H4T2 348 aaPredicted RBP13.89□□□□□ -0.19
POLR2J3-210ENST00000504677 CNOT7Q9UIV1 285 aaKnown RBP13.89□□□□□ -0.19
POLR2J3-210ENST00000504677 STX8Q9UNK0 236 aa13.89□□□□□ -0.19
POLR2J3-210ENST00000504677 MYH6P13533 1939 aa13.88□□□□□ -0.19
POLR2J3-210ENST00000504677 TBC1D12O60347 775 aa13.88□□□□□ -0.19
POLR2J3-210ENST00000504677 DEXIO95424 95 aa13.88□□□□□ -0.19
POLR2J3-210ENST00000504677 AKAP17AQ02040 695 aaKnown RBP13.88□□□□□ -0.19
POLR2J3-210ENST00000504677 TRIM29Q14134 588 aa13.88□□□□□ -0.19
POLR2J3-210ENST00000504677 GRM4Q14833 912 aa13.88□□□□□ -0.19
POLR2J3-210ENST00000504677 CSPP1Q1MSJ5 1256 aa13.88□□□□□ -0.19
POLR2J3-210ENST00000504677 KIF4BQ2VIQ3 1234 aa13.88□□□□□ -0.19
POLR2J3-210ENST00000504677 TMTC3Q6ZXV5 915 aa13.88□□□□□ -0.19
POLR2J3-210ENST00000504677 CDC37L1Q7L3B6 337 aa13.88□□□□□ -0.19
POLR2J3-210ENST00000504677 CEP95Q96GE4 821 aa13.88□□□□□ -0.19
POLR2J3-210ENST00000504677 C8orf76Q96K31 380 aa13.88□□□□□ -0.19
POLR2J3-210ENST00000504677 TMEM47Q9BQJ4 181 aa13.88□□□□□ -0.19
POLR2J3-210ENST00000504677 LZTS2Q9BRK4 669 aa13.88□□□□□ -0.19
POLR2J3-210ENST00000504677 DNAJC18Q9H819 358 aa13.88□□□□□ -0.19
POLR2J3-210ENST00000504677 MTMR4Q9NYA4 1195 aa13.88□□□□□ -0.19
POLR2J3-210ENST00000504677 ZC3H4Q9UPT8 1303 aaKnown RBP13.88□□□□□ -0.19
POLR2J3-210ENST00000504677 TTLL1O95922 423 aa13.87□□□□□ -0.19
POLR2J3-210ENST00000504677 AKR1B1P15121 316 aa13.87□□□□□ -0.19
POLR2J3-210ENST00000504677 NBR1Q14596 966 aa13.87□□□□□ -0.19
POLR2J3-210ENST00000504677 CERKLQ49MI3 558 aaPredicted RBP13.87□□□□□ -0.19
POLR2J3-210ENST00000504677 FOXD4L5Q5VV16 416 aaPredicted RBP13.87□□□□□ -0.19
POLR2J3-210ENST00000504677 TMEM179Q6ZVK1 233 aa13.87□□□□□ -0.19
POLR2J3-210ENST00000504677 FOXD4L4Q8WXT5 416 aaPredicted RBP13.87□□□□□ -0.19
POLR2J3-210ENST00000504677 ALG1Q9BT22 464 aa13.87□□□□□ -0.19
POLR2J3-210ENST00000504677 SLC26A6Q9BXS9 759 aa13.87□□□□□ -0.19
POLR2J3-210ENST00000504677 GPRC5DQ9NZD1 345 aa13.87□□□□□ -0.19
POLR2J3-210ENST00000504677 RNF181Q9P0P0 153 aa13.87□□□□□ -0.19
POLR2J3-210ENST00000504677 MYH15Q9Y2K3 1946 aa13.86□□□□□ -0.19
POLR2J3-210ENST00000504677 MPHOSPH10O00566 681 aaKnown RBP13.86□□□□□ -0.19
POLR2J3-210ENST00000504677 PRPF3O43395 683 aaKnown RBP13.86□□□□□ -0.19
POLR2J3-210ENST00000504677 YBX3P16989 372 aaKnown RBP eCLIP13.86□□□□□ -0.19
POLR2J3-210ENST00000504677 XBP1P17861 261 aa13.86□□□□□ -0.19
POLR2J3-210ENST00000504677 NBPF9Q3BBW0 867 aa13.86□□□□□ -0.19
POLR2J3-210ENST00000504677 NBPF11Q86T75 865 aa13.86□□□□□ -0.19
POLR2J3-210ENST00000504677 APOBEC3FQ8IUX4 373 aaKnown RBP13.86□□□□□ -0.19
POLR2J3-210ENST00000504677 FBXO18Q8NFZ0 1043 aa13.86□□□□□ -0.19
POLR2J3-210ENST00000504677 PHKBQ93100 1093 aa13.86□□□□□ -0.19
POLR2J3-210ENST00000504677 ANP32EQ9BTT0 268 aa13.86□□□□□ -0.19
POLR2J3-210ENST00000504677 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.86□□□□□ -0.19
POLR2J3-210ENST00000504677 KANSL2Q9H9L4 492 aa13.86□□□□□ -0.19
POLR2J3-210ENST00000504677 CABP5Q9NP86 173 aa13.86□□□□□ -0.19
POLR2J3-210ENST00000504677 SYNPO2Q9UMS6 1093 aa13.86□□□□□ -0.19
POLR2J3-210ENST00000504677 MYH4Q9Y623 1939 aa13.86□□□□□ -0.19
POLR2J3-210ENST00000504677 GRIN3BO60391 1043 aa13.85□□□□□ -0.19
POLR2J3-210ENST00000504677 SMARCA1P28370 1054 aa13.85□□□□□ -0.19
POLR2J3-210ENST00000504677 LMOD1P29536 600 aaPredicted RBP13.85□□□□□ -0.19
POLR2J3-210ENST00000504677 RESTQ13127 1097 aa13.85□□□□□ -0.19
POLR2J3-210ENST00000504677 ABCB5Q2M3G0 1257 aa13.85□□□□□ -0.19
POLR2J3-210ENST00000504677 SKOR2Q2VWA4 1001 aaPredicted RBP13.85□□□□□ -0.19
POLR2J3-210ENST00000504677 RBM26Q5T8P6 1007 aaKnown RBP13.85□□□□□ -0.19
POLR2J3-210ENST00000504677 ATL3Q6DD88 541 aa13.85□□□□□ -0.19
POLR2J3-210ENST00000504677 MCTP1Q6DN14 999 aa13.85□□□□□ -0.19
POLR2J3-210ENST00000504677 HOOK2Q96ED9 719 aa13.85□□□□□ -0.19
POLR2J3-210ENST00000504677 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.85□□□□□ -0.19
POLR2J3-210ENST00000504677 NYAP2Q9P242 653 aa13.85□□□□□ -0.19
POLR2J3-210ENST00000504677 CNTNAP5Q8WYK1 1306 aa13.85□□□□□ -0.19
POLR2J3-210ENST00000504677 SHTN1A0MZ66 631 aa13.84□□□□□ -0.19
POLR2J3-210ENST00000504677 PARP1P09874 1014 aaKnown RBP13.84□□□□□ -0.19
POLR2J3-210ENST00000504677 KRT85P78386 507 aa13.84□□□□□ -0.19
POLR2J3-210ENST00000504677 FUT2Q10981 343 aa13.84□□□□□ -0.19
POLR2J3-210ENST00000504677 TBC1D10BQ4KMP7 808 aaPredicted RBP13.84□□□□□ -0.19
POLR2J3-210ENST00000504677 ASPRV1Q53RT3 343 aa13.84□□□□□ -0.19
POLR2J3-210ENST00000504677 BRAPQ7Z569 592 aa13.84□□□□□ -0.19
POLR2J3-210ENST00000504677 FAM177A1Q8N128 213 aaPredicted RBP13.84□□□□□ -0.19
POLR2J3-210ENST00000504677 TMEM87AQ8NBN3 555 aa13.84□□□□□ -0.19
POLR2J3-210ENST00000504677 GINM1Q9NU53 330 aa13.84□□□□□ -0.19
POLR2J3-210ENST00000504677 PPP2R3BQ9Y5P8 575 aa13.84□□□□□ -0.19
POLR2J3-210ENST00000504677 PALM3A6NDB9 673 aaPredicted RBP13.83□□□□□ -0.2
POLR2J3-210ENST00000504677 DTNBO60941 627 aa13.83□□□□□ -0.2
POLR2J3-210ENST00000504677 PLEKHA8P1O95397 391 aa13.83□□□□□ -0.2
POLR2J3-210ENST00000504677 MAP3K10Q02779 954 aa13.83□□□□□ -0.2
POLR2J3-210ENST00000504677 ICA1Q05084 483 aa13.83□□□□□ -0.2
POLR2J3-210ENST00000504677 RASA3Q14644 834 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms