RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 SHMT1P34896 483 aa14.95□□□□□ -0.02
PDGFRA-204ENST00000504461 AMOTL1Q8IY63 956 aa14.95□□□□□ -0.02
PDGFRA-204ENST00000504461 DDRGK1Q96HY6 314 aa14.95□□□□□ -0.02
PDGFRA-204ENST00000504461 DCP1AQ9NPI6 582 aaPredicted RBP14.95□□□□□ -0.02
PDGFRA-204ENST00000504461 ATP8A2Q9NTI2 1148 aa14.95□□□□□ -0.02
PDGFRA-204ENST00000504461 USP17L15C9J2P7 530 aa14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 USP17L13C9JLJ4 530 aa14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 USP17L11C9JVI0 530 aa14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 USP17L18D6R9N7 530 aa14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 USP17L22D6RA61 530 aa14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 USP17L17D6RBQ6 530 aa14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 USP17L19D6RCP7 530 aa14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 USP17L20D6RJB6 530 aa14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 MBD4O95243 580 aa14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 SGPL1O95470 568 aa14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 TFRCP02786 760 aaKnown RBP14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 USP17L24Q0WX57 530 aa14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 SLFNL1Q499Z3 407 aa14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 SMC5Q8IY18 1101 aa14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 U2AF1L4Q8WU68 220 aaKnown RBP14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 DPF3Q92784 378 aa14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 SHISA4Q96DD7 197 aa14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 GPATCH3Q96I76 525 aa14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 C12orf42Q96LP6 360 aa14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 PAGR1Q9BTK6 254 aa14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 KIAA1683Q9H0B3 1180 aa14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 CWC22Q9HCG8 908 aaKnown RBP14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 ECHDC1Q9NTX5 307 aa14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 RBPJLQ9UBG7 517 aa14.94□□□□□ -0.02
PDGFRA-204ENST00000504461 PEX10O60683 326 aa14.93□□□□□ -0.02
PDGFRA-204ENST00000504461 CAPN2P17655 700 aa14.93□□□□□ -0.02
PDGFRA-204ENST00000504461 MAPK4P31152 587 aa14.93□□□□□ -0.02
PDGFRA-204ENST00000504461 ERVK-9P63128 1117 aa14.93□□□□□ -0.02
PDGFRA-204ENST00000504461 ERVK-24P63145 666 aa14.93□□□□□ -0.02
PDGFRA-204ENST00000504461 GABPAQ06546 454 aa14.93□□□□□ -0.02
PDGFRA-204ENST00000504461 SEPT2Q15019 361 aa14.93□□□□□ -0.02
PDGFRA-204ENST00000504461 UBE3CQ15386 1083 aa14.93□□□□□ -0.02
PDGFRA-204ENST00000504461 ACER1Q8TDN7 264 aa14.93□□□□□ -0.02
PDGFRA-204ENST00000504461 NUDT12Q9BQG2 462 aa14.93□□□□□ -0.02
PDGFRA-204ENST00000504461 TXNRD2Q9NNW7 524 aa14.93□□□□□ -0.02
PDGFRA-204ENST00000504461 SWAP70Q9UH65 585 aa14.93□□□□□ -0.02
PDGFRA-204ENST00000504461 GJD2Q9UKL4 321 aa14.93□□□□□ -0.02
PDGFRA-204ENST00000504461 PRKAB2O43741 272 aa14.92□□□□□ -0.02
PDGFRA-204ENST00000504461 HMGCRP04035 888 aa14.92□□□□□ -0.02
PDGFRA-204ENST00000504461 CYP2D6P10635 497 aa14.92□□□□□ -0.02
PDGFRA-204ENST00000504461 CYP2B6P20813 491 aa14.92□□□□□ -0.02
PDGFRA-204ENST00000504461 Q3C1V9 767 aa14.92□□□□□ -0.02
PDGFRA-204ENST00000504461 ANKRD45Q5TZF3 282 aa14.92□□□□□ -0.02
PDGFRA-204ENST00000504461 CATSPERGQ6ZRH7 1159 aa14.92□□□□□ -0.02
PDGFRA-204ENST00000504461 DEFB118Q96PH6 123 aa14.92□□□□□ -0.02
PDGFRA-204ENST00000504461 HTATIP2Q9BUP3 242 aa14.92□□□□□ -0.02
PDGFRA-204ENST00000504461 SLC4A4Q9Y6R1 1079 aa14.92□□□□□ -0.02
PDGFRA-204ENST00000504461 IGHDP01880 384 aa14.91□□□□□ -0.02
PDGFRA-204ENST00000504461 VCAM1P19320 739 aa14.91□□□□□ -0.02
PDGFRA-204ENST00000504461 GUCY1A2P33402 732 aa14.91□□□□□ -0.02
PDGFRA-204ENST00000504461 CCNA1P78396 465 aa14.91□□□□□ -0.02
PDGFRA-204ENST00000504461 EVX2Q03828 476 aa14.91□□□□□ -0.02
PDGFRA-204ENST00000504461 TMEM179Q6ZVK1 233 aa14.91□□□□□ -0.02
PDGFRA-204ENST00000504461 SOCS4Q8WXH5 440 aa14.91□□□□□ -0.02
PDGFRA-204ENST00000504461 DYNLL2Q96FJ2 89 aa14.91□□□□□ -0.02
PDGFRA-204ENST00000504461 RPAP3Q9H6T3 665 aaPredicted RBP14.91□□□□□ -0.02
PDGFRA-204ENST00000504461 HMX1Q9NP08 348 aaPredicted RBP14.91□□□□□ -0.02
PDGFRA-204ENST00000504461 RABGAP1Q9Y3P9 1069 aa14.91□□□□□ -0.02
PDGFRA-204ENST00000504461 ZNFX1Q9P2E3 1918 aaKnown RBP14.9□□□□□ -0.02
PDGFRA-204ENST00000504461 USP17L12C9JPN9 530 aa14.9□□□□□ -0.02
PDGFRA-204ENST00000504461 USP17L21D6R901 530 aa14.9□□□□□ -0.02
PDGFRA-204ENST00000504461 GLRX3O76003 335 aaKnown RBP14.9□□□□□ -0.02
PDGFRA-204ENST00000504461 FARP2O94887 1054 aaPredicted RBP14.9□□□□□ -0.02
PDGFRA-204ENST00000504461 CHGBP05060 677 aa14.9□□□□□ -0.02
PDGFRA-204ENST00000504461 WDR78Q5VTH9 848 aa14.9□□□□□ -0.02
PDGFRA-204ENST00000504461 PLEKHH3Q7Z736 793 aa14.9□□□□□ -0.02
PDGFRA-204ENST00000504461 TRMT44Q8IYL2 757 aaKnown RBP14.9□□□□□ -0.02
PDGFRA-204ENST00000504461 SLC44A5Q8NCS7 719 aa14.9□□□□□ -0.02
PDGFRA-204ENST00000504461 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.9□□□□□ -0.02
PDGFRA-204ENST00000504461 ARHGEF10LQ9HCE6 1279 aa14.9□□□□□ -0.02
PDGFRA-204ENST00000504461 PAK6Q9NQU5 681 aaPredicted RBP14.9□□□□□ -0.02
PDGFRA-204ENST00000504461 RPTORQ8N122 1335 aa14.9□□□□□ -0.02
PDGFRA-204ENST00000504461 RGS2P41220 211 aa14.89□□□□□ -0.03
PDGFRA-204ENST00000504461 NUCB1Q02818 461 aa14.89□□□□□ -0.03
PDGFRA-204ENST00000504461 C12orf60Q5U649 245 aa14.89□□□□□ -0.03
PDGFRA-204ENST00000504461 GPR142Q7Z601 462 aa14.89□□□□□ -0.03
PDGFRA-204ENST00000504461 CCDC17Q96LX7 622 aa14.89□□□□□ -0.03
PDGFRA-204ENST00000504461 PUS7LQ9H0K6 701 aaKnown RBP14.89□□□□□ -0.03
PDGFRA-204ENST00000504461 PORCNQ9H237 461 aa14.89□□□□□ -0.03
PDGFRA-204ENST00000504461 COL11A1P12107 1806 aaPredicted RBP14.89□□□□□ -0.03
PDGFRA-204ENST00000504461 PARP14Q460N5 1801 aa14.89□□□□□ -0.03
PDGFRA-204ENST00000504461 RLFQ13129 1914 aa14.88□□□□□ -0.03
PDGFRA-204ENST00000504461 MYH4Q9Y623 1939 aa14.88□□□□□ -0.03
PDGFRA-204ENST00000504461 CYP2D7A0A087X1C5 515 aa14.88□□□□□ -0.03
PDGFRA-204ENST00000504461 A0A1W2PRG0 241 aa14.88□□□□□ -0.03
PDGFRA-204ENST00000504461 ERC2O15083 957 aa14.88□□□□□ -0.03
PDGFRA-204ENST00000504461 XRCC5P13010 732 aaKnown RBP14.88□□□□□ -0.03
PDGFRA-204ENST00000504461 AKR1B1P15121 316 aa14.88□□□□□ -0.03
PDGFRA-204ENST00000504461 ZKSCAN1P17029 563 aaPredicted RBP14.88□□□□□ -0.03
PDGFRA-204ENST00000504461 CDK8P49336 464 aa14.88□□□□□ -0.03
PDGFRA-204ENST00000504461 COG2Q14746 738 aa14.88□□□□□ -0.03
PDGFRA-204ENST00000504461 HABP4Q5JVS0 413 aaKnown RBP14.88□□□□□ -0.03
PDGFRA-204ENST00000504461 CENPQQ7L2Z9 268 aaPredicted RBP14.88□□□□□ -0.03
PDGFRA-204ENST00000504461 CHD1LQ86WJ1 897 aa14.88□□□□□ -0.03
PDGFRA-204ENST00000504461 KBTBD3Q8NAB2 608 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms