RNA–Protein interactions for RNA: ENST00000503972.5

YIPF3-212, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 933 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-212ENST00000503972 BECN1Q14457 450 aa18.15■□□□□ 0.5
YIPF3-212ENST00000503972 CHADLQ6NUI6 762 aa18.15■□□□□ 0.5
YIPF3-212ENST00000503972 NFXL1Q6ZNB6 911 aa18.15■□□□□ 0.5
YIPF3-212ENST00000503972 ZSCAN31Q96LW9 406 aaPredicted RBP18.15■□□□□ 0.5
YIPF3-212ENST00000503972 GINM1Q9NU53 330 aa18.15■□□□□ 0.5
YIPF3-212ENST00000503972 BRPF3Q9ULD4 1205 aa18.15■□□□□ 0.5
YIPF3-212ENST00000503972 ZBTB21Q9ULJ3 1066 aa18.15■□□□□ 0.5
YIPF3-212ENST00000503972 FZD1Q9UP38 647 aa18.15■□□□□ 0.5
YIPF3-212ENST00000503972 KLF18A0A0U1RQI7 1052 aa18.14■□□□□ 0.49
YIPF3-212ENST00000503972 CCDC69A6NI79 296 aa18.14■□□□□ 0.49
YIPF3-212ENST00000503972 TRAF5O00463 557 aa18.14■□□□□ 0.49
YIPF3-212ENST00000503972 PPP1R12BO60237 982 aaPredicted RBP18.14■□□□□ 0.49
YIPF3-212ENST00000503972 INPP5BP32019 993 aa18.14■□□□□ 0.49
YIPF3-212ENST00000503972 PRKG1Q13976 671 aa18.14■□□□□ 0.49
YIPF3-212ENST00000503972 SEPT2Q15019 361 aa18.14■□□□□ 0.49
YIPF3-212ENST00000503972 PPP4R3BQ5MIZ7 849 aa18.14■□□□□ 0.49
YIPF3-212ENST00000503972 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.14■□□□□ 0.49
YIPF3-212ENST00000503972 WRNIP1Q96S55 665 aa18.14■□□□□ 0.49
YIPF3-212ENST00000503972 KANSL2Q9H9L4 492 aa18.14■□□□□ 0.49
YIPF3-212ENST00000503972 STX8Q9UNK0 236 aa18.14■□□□□ 0.49
YIPF3-212ENST00000503972 KIF3CO14782 793 aa18.13■□□□□ 0.49
YIPF3-212ENST00000503972 TTLL1O95922 423 aa18.13■□□□□ 0.49
YIPF3-212ENST00000503972 ASNSP08243 561 aa18.13■□□□□ 0.49
YIPF3-212ENST00000503972 RAB3GAP1Q15042 981 aa18.13■□□□□ 0.49
YIPF3-212ENST00000503972 ME3Q16798 604 aa18.13■□□□□ 0.49
YIPF3-212ENST00000503972 CLEC10AQ8IUN9 316 aa18.13■□□□□ 0.49
YIPF3-212ENST00000503972 ZNF274Q96GC6 653 aaPredicted RBP18.13■□□□□ 0.49
YIPF3-212ENST00000503972 TMX3Q96JJ7 454 aa18.13■□□□□ 0.49
YIPF3-212ENST00000503972 TMEM47Q9BQJ4 181 aa18.13■□□□□ 0.49
YIPF3-212ENST00000503972 NYAP2Q9P242 653 aa18.13■□□□□ 0.49
YIPF3-212ENST00000503972 SLC12A7Q9Y666 1083 aa18.13■□□□□ 0.49
YIPF3-212ENST00000503972 LARGE1O95461 756 aa18.12■□□□□ 0.49
YIPF3-212ENST00000503972 PDIA3P30101 505 aaKnown RBP18.12■□□□□ 0.49
YIPF3-212ENST00000503972 ICA1Q05084 483 aa18.12■□□□□ 0.49
YIPF3-212ENST00000503972 NOL9Q5SY16 702 aaKnown RBP18.12■□□□□ 0.49
YIPF3-212ENST00000503972 APOA5Q6Q788 366 aa18.12■□□□□ 0.49
YIPF3-212ENST00000503972 SCYL3Q8IZE3 742 aa18.12■□□□□ 0.49
YIPF3-212ENST00000503972 KAT14Q9H8E8 782 aa18.12■□□□□ 0.49
YIPF3-212ENST00000503972 SH2B1Q9NRF2 756 aaPredicted RBP18.12■□□□□ 0.49
YIPF3-212ENST00000503972 CLIP2Q9UDT6 1046 aa18.12■□□□□ 0.49
YIPF3-212ENST00000503972 ITGBL1O95965 494 aaPredicted RBP18.11■□□□□ 0.49
YIPF3-212ENST00000503972 TOP1P11387 765 aaKnown RBP18.11■□□□□ 0.49
YIPF3-212ENST00000503972 EEF2P13639 858 aaKnown RBP18.11■□□□□ 0.49
YIPF3-212ENST00000503972 IREB2P48200 963 aaKnown RBP18.11■□□□□ 0.49
YIPF3-212ENST00000503972 MAP3K9P80192 1104 aa18.11■□□□□ 0.49
YIPF3-212ENST00000503972 FMR1Q06787 632 aaKnown RBP eCLIP18.11■□□□□ 0.49
YIPF3-212ENST00000503972 MAP3K11Q16584 847 aa18.11■□□□□ 0.49
YIPF3-212ENST00000503972 SYNE3Q6ZMZ3 975 aa18.11■□□□□ 0.49
YIPF3-212ENST00000503972 CATIPQ7Z7H3 387 aa18.11■□□□□ 0.49
YIPF3-212ENST00000503972 SIAH1Q8IUQ4 282 aa18.11■□□□□ 0.49
YIPF3-212ENST00000503972 ZNF654Q8IZM8 581 aa18.11■□□□□ 0.49
YIPF3-212ENST00000503972 ZKSCAN4Q969J2 545 aaPredicted RBP18.11■□□□□ 0.49
YIPF3-212ENST00000503972 MKL1Q969V6 931 aa18.11■□□□□ 0.49
YIPF3-212ENST00000503972 NAP1L2Q9ULW6 460 aaPredicted RBP18.11■□□□□ 0.49
YIPF3-212ENST00000503972 GOLGA8BA8MQT2 603 aa18.1■□□□□ 0.49
YIPF3-212ENST00000503972 ZBTB43O43298 467 aa18.1■□□□□ 0.49
YIPF3-212ENST00000503972 PFKFB2O60825 505 aa18.1■□□□□ 0.49
YIPF3-212ENST00000503972 YY1P25490 414 aa18.1■□□□□ 0.49
YIPF3-212ENST00000503972 STK3Q13188 491 aa18.1■□□□□ 0.49
YIPF3-212ENST00000503972 ARMC9Q7Z3E5 817 aa18.1■□□□□ 0.49
YIPF3-212ENST00000503972 PNMA1Q8ND90 353 aa18.1■□□□□ 0.49
YIPF3-212ENST00000503972 MYL10Q9BUA6 226 aa18.1■□□□□ 0.49
YIPF3-212ENST00000503972 SLKQ9H2G2 1235 aaPredicted RBP18.1■□□□□ 0.49
YIPF3-212ENST00000503972 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.1■□□□□ 0.49
YIPF3-212ENST00000503972 HPS5Q9UPZ3 1129 aa18.1■□□□□ 0.49
YIPF3-212ENST00000503972 ATAD5Q96QE3 1844 aa18.09■□□□□ 0.49
YIPF3-212ENST00000503972 DDAH1O94760 285 aa18.09■□□□□ 0.49
YIPF3-212ENST00000503972 RCAN1P53805 252 aa18.09■□□□□ 0.49
YIPF3-212ENST00000503972 ATP2B2Q01814 1243 aa18.09■□□□□ 0.49
YIPF3-212ENST00000503972 TROAPQ12815 778 aa18.09■□□□□ 0.49
YIPF3-212ENST00000503972 CUL4AQ13619 759 aa18.09■□□□□ 0.49
YIPF3-212ENST00000503972 TTLL12Q14166 644 aaPredicted RBP18.09■□□□□ 0.49
YIPF3-212ENST00000503972 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.09■□□□□ 0.49
YIPF3-212ENST00000503972 MOB2Q70IA6 237 aa18.09■□□□□ 0.49
YIPF3-212ENST00000503972 RAB11FIP4Q86YS3 637 aa18.09■□□□□ 0.49
YIPF3-212ENST00000503972 ZNF408Q9H9D4 720 aa18.09■□□□□ 0.49
YIPF3-212ENST00000503972 ARHGEF10LQ9HCE6 1279 aa18.09■□□□□ 0.49
YIPF3-212ENST00000503972 PICK1Q9NRD5 415 aa18.09■□□□□ 0.49
YIPF3-212ENST00000503972 DOCK1Q14185 1865 aa18.09■□□□□ 0.49
YIPF3-212ENST00000503972 NID2Q14112 1375 aa18.08■□□□□ 0.49
YIPF3-212ENST00000503972 A0A1W2PRG0 241 aa18.08■□□□□ 0.48
YIPF3-212ENST00000503972 USP17L5A8MUK1 530 aa18.08■□□□□ 0.48
YIPF3-212ENST00000503972 CALM1P0DP23 149 aa18.08■□□□□ 0.48
YIPF3-212ENST00000503972 CALM2P0DP24 149 aa18.08■□□□□ 0.48
YIPF3-212ENST00000503972 CALM3P0DP25 149 aa18.08■□□□□ 0.48
YIPF3-212ENST00000503972 PTPRAP18433 802 aa18.08■□□□□ 0.48
YIPF3-212ENST00000503972 METAP2P50579 478 aaKnown RBP eCLIP18.08■□□□□ 0.48
YIPF3-212ENST00000503972 ST3GAL1Q11201 340 aa18.08■□□□□ 0.48
YIPF3-212ENST00000503972 SCRN1Q12765 414 aa18.08■□□□□ 0.48
YIPF3-212ENST00000503972 VGLL4Q14135 290 aa18.08■□□□□ 0.48
YIPF3-212ENST00000503972 MICU3Q86XE3 530 aa18.08■□□□□ 0.48
YIPF3-212ENST00000503972 ANKRD13AQ8IZ07 590 aa18.08■□□□□ 0.48
YIPF3-212ENST00000503972 LRRC47Q8N1G4 583 aaKnown RBP18.08■□□□□ 0.48
YIPF3-212ENST00000503972 NECAB1Q8N987 351 aa18.08■□□□□ 0.48
YIPF3-212ENST00000503972 NUP133Q8WUM0 1156 aa18.08■□□□□ 0.48
YIPF3-212ENST00000503972 GTF3C6Q969F1 213 aa18.08■□□□□ 0.48
YIPF3-212ENST00000503972 IPO9Q96P70 1041 aaKnown RBP18.08■□□□□ 0.48
YIPF3-212ENST00000503972 SYNPO2Q9UMS6 1093 aa18.08■□□□□ 0.48
YIPF3-212ENST00000503972 PAPPA2Q9BXP8 1791 aa18.08■□□□□ 0.48
YIPF3-212ENST00000503972 GOLGA8AA7E2F4 631 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms