RNA–Protein interactions for RNA: ENST00000503450.1

SCFD2-203, Transcript of sec1 family domain containing 2, humanhuman

TSL 4

Gene SCFD2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-203ENST00000503450 VPS53Q5VIR6 699 aa6.28□□□□□ -1.4
SCFD2-203ENST00000503450 CCDC129Q6ZRS4 1044 aa6.28□□□□□ -1.4
SCFD2-203ENST00000503450 C16orf86Q6ZW13 317 aa6.28□□□□□ -1.4
SCFD2-203ENST00000503450 CRACR2BQ8N4Y2 399 aaPredicted RBP6.28□□□□□ -1.4
SCFD2-203ENST00000503450 NKX2-3Q8TAU0 364 aa6.28□□□□□ -1.4
SCFD2-203ENST00000503450 GCC1Q96CN9 775 aa6.28□□□□□ -1.4
SCFD2-203ENST00000503450 TBC1D2Q9BYX2 928 aa6.28□□□□□ -1.4
SCFD2-203ENST00000503450 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.28□□□□□ -1.4
SCFD2-203ENST00000503450 KIAA1683Q9H0B3 1180 aa6.28□□□□□ -1.4
SCFD2-203ENST00000503450 RWDD1Q9H446 243 aaPredicted RBP6.28□□□□□ -1.4
SCFD2-203ENST00000503450 ATP8A2Q9NTI2 1148 aa6.28□□□□□ -1.4
SCFD2-203ENST00000503450 GINM1Q9NU53 330 aa6.28□□□□□ -1.4
SCFD2-203ENST00000503450 MORF4L1Q9UBU8 362 aa6.28□□□□□ -1.4
SCFD2-203ENST00000503450 GABRQQ9UN88 632 aa6.28□□□□□ -1.4
SCFD2-203ENST00000503450 SLC4A4Q9Y6R1 1079 aa6.28□□□□□ -1.4
SCFD2-203ENST00000503450 A0A0G2JMZ2 1700 aa6.28□□□□□ -1.4
SCFD2-203ENST00000503450 IGKV6D-41A0A0C4DH26 115 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 A0A0D9SFI3 127 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 USP17L10C9JJH3 530 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 POLR3DP05423 398 aaPredicted RBP6.27□□□□□ -1.41
SCFD2-203ENST00000503450 VCAM1P19320 739 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 PSMC4P43686 418 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 CDK8P49336 464 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 NUCB1Q02818 461 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 FAM110CQ1W6H9 321 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 ABCB5Q2M3G0 1257 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 CERKLQ49MI3 558 aaPredicted RBP6.27□□□□□ -1.41
SCFD2-203ENST00000503450 POTEDQ86YR6 584 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 PLEKHM2Q8IWE5 1019 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 ANKRD13CQ8N6S4 541 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 SH3TC2Q8TF17 1288 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 SHISA4Q96DD7 197 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 GPATCH3Q96I76 525 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 FAM227BQ96M60 508 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 P2RX7Q99572 595 aaKnown RBP6.27□□□□□ -1.41
SCFD2-203ENST00000503450 IL25Q9H293 177 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 AS3MTQ9HBK9 375 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 RBPJLQ9UBG7 517 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 SRRDQ9UH36 339 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 MGAMO43451 1857 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 PARP14Q460N5 1801 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 MYH8P13535 1937 aa6.27□□□□□ -1.41
SCFD2-203ENST00000503450 SPDYE16A6NNV3 312 aaPredicted RBP6.26□□□□□ -1.41
SCFD2-203ENST00000503450 C19orf81C9J6K1 198 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 ERC2O15083 957 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 ZFYP08048 801 aaPredicted RBP6.26□□□□□ -1.41
SCFD2-203ENST00000503450 GSPT1P15170 499 aaKnown RBP6.26□□□□□ -1.41
SCFD2-203ENST00000503450 RASA1P20936 1047 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 HERVK_113P62684 666 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 RAB3GAP1Q15042 981 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 MTFR1Q15390 333 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 ZYXQ15942 572 aaKnown RBP6.26□□□□□ -1.41
SCFD2-203ENST00000503450 Q3C1V9 767 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 B4GALNT3Q6L9W6 998 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 ZSCAN25Q6NSZ9 544 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 GIMAP6Q6P9H5 292 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 USP17L2Q6R6M4 530 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 TMEM179Q6ZVK1 233 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 ZNF589Q86UQ0 364 aaPredicted RBP6.26□□□□□ -1.41
SCFD2-203ENST00000503450 CHD1LQ86WJ1 897 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 IFNL3Q8IZI9 196 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 FSD1Q9BTV5 496 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 NBPF3Q9H094 633 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 PORCNQ9H237 461 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 OSBPL3Q9H4L5 887 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 BTBD7Q9P203 1132 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 PCDH10Q9P2E7 1040 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 ARPP21Q9UBL0 812 aaPredicted RBP6.26□□□□□ -1.41
SCFD2-203ENST00000503450 ZBTB47Q9UFB7 747 aaPredicted RBP6.26□□□□□ -1.41
SCFD2-203ENST00000503450 SWAP70Q9UH65 585 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 GJD2Q9UKL4 321 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 TAOK2Q9UL54 1235 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.26□□□□□ -1.41
SCFD2-203ENST00000503450 TMX2Q9Y320 296 aa6.26□□□□□ -1.41
SCFD2-203ENST00000503450 RANBP2P49792 3224 aaKnown RBP6.26□□□□□ -1.41
SCFD2-203ENST00000503450 MYPNQ86TC9 1320 aa6.25□□□□□ -1.41
SCFD2-203ENST00000503450 FMNL1O95466 1100 aaPredicted RBP6.25□□□□□ -1.41
SCFD2-203ENST00000503450 IGHA2P01877 340 aa6.25□□□□□ -1.41
SCFD2-203ENST00000503450 NEFLP07196 543 aa6.25□□□□□ -1.41
SCFD2-203ENST00000503450 EN2P19622 333 aaPredicted RBP6.25□□□□□ -1.41
SCFD2-203ENST00000503450 FLT3LGP49771 235 aa6.25□□□□□ -1.41
SCFD2-203ENST00000503450 PRMT2P55345 433 aa6.25□□□□□ -1.41
SCFD2-203ENST00000503450 MKRN4PQ13434 485 aaPredicted RBP6.25□□□□□ -1.41
SCFD2-203ENST00000503450 IRF5Q13568 498 aa6.25□□□□□ -1.41
SCFD2-203ENST00000503450 LBX2Q6XYB7 198 aa6.25□□□□□ -1.41
SCFD2-203ENST00000503450 CATSPERGQ6ZRH7 1159 aa6.25□□□□□ -1.41
SCFD2-203ENST00000503450 STK11IPQ8N1F8 1099 aa6.25□□□□□ -1.41
SCFD2-203ENST00000503450 SMCR8Q8TEV9 937 aaPredicted RBP6.25□□□□□ -1.41
SCFD2-203ENST00000503450 USP6NLQ92738 828 aa6.25□□□□□ -1.41
SCFD2-203ENST00000503450 EVI5LQ96CN4 794 aa6.25□□□□□ -1.41
SCFD2-203ENST00000503450 FEZ1Q99689 392 aa6.25□□□□□ -1.41
SCFD2-203ENST00000503450 TRIM34Q9BYJ4 488 aa6.25□□□□□ -1.41
SCFD2-203ENST00000503450 INCENPQ9NQS7 918 aa6.25□□□□□ -1.41
SCFD2-203ENST00000503450 TMOD4Q9NZQ9 345 aa6.25□□□□□ -1.41
SCFD2-203ENST00000503450 PNMA3Q9UL41 463 aa6.25□□□□□ -1.41
SCFD2-203ENST00000503450 PLIN4Q96Q06 1357 aa6.25□□□□□ -1.41
SCFD2-203ENST00000503450 PATL2C9JE40 543 aaKnown RBP6.24□□□□□ -1.41
SCFD2-203ENST00000503450 MPHOSPH10O00566 681 aaKnown RBP6.24□□□□□ -1.41
SCFD2-203ENST00000503450 PRDM1O75626 825 aa6.24□□□□□ -1.41
SCFD2-203ENST00000503450 GNRH1P01148 92 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms