RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 DNAJB8Q8NHS0 232 aa9.29□□□□□ -0.92
NIPBL-203ENST00000503274 PPP1R13LQ8WUF5 828 aa9.29□□□□□ -0.92
NIPBL-203ENST00000503274 MAPK8IP1Q9UQF2 711 aa9.29□□□□□ -0.92
NIPBL-203ENST00000503274 RGS13O14921 159 aa9.28□□□□□ -0.92
NIPBL-203ENST00000503274 CYP7A1P22680 504 aa9.28□□□□□ -0.92
NIPBL-203ENST00000503274 ETV3P41162 512 aa9.28□□□□□ -0.92
NIPBL-203ENST00000503274 CCDC81Q6ZN84 652 aa9.28□□□□□ -0.92
NIPBL-203ENST00000503274 ARHGAP27Q6ZUM4 889 aa9.28□□□□□ -0.92
NIPBL-203ENST00000503274 NLRC3Q7RTR2 1065 aa9.28□□□□□ -0.92
NIPBL-203ENST00000503274 FAM181AQ8N9Y4 354 aa9.28□□□□□ -0.92
NIPBL-203ENST00000503274 RBBP8NLQ8NC74 664 aaPredicted RBP9.28□□□□□ -0.92
NIPBL-203ENST00000503274 BAHD1Q8TBE0 780 aaPredicted RBP9.28□□□□□ -0.92
NIPBL-203ENST00000503274 CRBNQ96SW2 442 aa9.28□□□□□ -0.92
NIPBL-203ENST00000503274 KIF2CQ99661 725 aa9.28□□□□□ -0.92
NIPBL-203ENST00000503274 SRRTQ9BXP5 876 aaKnown RBP9.28□□□□□ -0.92
NIPBL-203ENST00000503274 MKNK2Q9HBH9 465 aa9.28□□□□□ -0.92
NIPBL-203ENST00000503274 NME1P15531 152 aaKnown RBP9.27□□□□□ -0.93
NIPBL-203ENST00000503274 GBP1P32455 592 aa9.27□□□□□ -0.93
NIPBL-203ENST00000503274 OXCT1P55809 520 aa9.27□□□□□ -0.93
NIPBL-203ENST00000503274 SFRP5Q5T4F7 317 aa9.27□□□□□ -0.93
NIPBL-203ENST00000503274 SLC43A3Q8NBI5 491 aa9.27□□□□□ -0.93
NIPBL-203ENST00000503274 CPLX3Q8WVH0 158 aa9.27□□□□□ -0.93
NIPBL-203ENST00000503274 ZC3H7BQ9UGR2 993 aaKnown RBP9.27□□□□□ -0.93
NIPBL-203ENST00000503274 CNTNAP4Q9C0A0 1308 aa9.27□□□□□ -0.93
NIPBL-203ENST00000503274 SSTR4P31391 388 aa9.26□□□□□ -0.93
NIPBL-203ENST00000503274 EIF6P56537 245 aaKnown RBP9.26□□□□□ -0.93
NIPBL-203ENST00000503274 ARID5AQ03989 594 aa9.26□□□□□ -0.93
NIPBL-203ENST00000503274 ARTNQ5T4W7 220 aa9.26□□□□□ -0.93
NIPBL-203ENST00000503274 COX4I2Q96KJ9 171 aa9.26□□□□□ -0.93
NIPBL-203ENST00000503274 STRIP2Q9ULQ0 834 aa9.26□□□□□ -0.93
NIPBL-203ENST00000503274 U3KQE9 123 aa9.26□□□□□ -0.93
NIPBL-203ENST00000503274 GNAT3A8MTJ3 354 aa9.25□□□□□ -0.93
NIPBL-203ENST00000503274 TNFRSF10CO14798 259 aa9.25□□□□□ -0.93
NIPBL-203ENST00000503274 MED26O95402 600 aa9.25□□□□□ -0.93
NIPBL-203ENST00000503274 CD97P48960 835 aa9.25□□□□□ -0.93
NIPBL-203ENST00000503274 NAALADL2Q58DX5 795 aa9.25□□□□□ -0.93
NIPBL-203ENST00000503274 INTS3Q68E01 1043 aaKnown RBP9.25□□□□□ -0.93
NIPBL-203ENST00000503274 TM9SF2Q99805 663 aa9.25□□□□□ -0.93
NIPBL-203ENST00000503274 ZFP64Q9NPA5 681 aa9.25□□□□□ -0.93
NIPBL-203ENST00000503274 UBOX5O94941 541 aa9.24□□□□□ -0.93
NIPBL-203ENST00000503274 CEACAM5P06731 702 aa9.24□□□□□ -0.93
NIPBL-203ENST00000503274 CCNFP41002 786 aa9.24□□□□□ -0.93
NIPBL-203ENST00000503274 GIPRP48546 466 aa9.24□□□□□ -0.93
NIPBL-203ENST00000503274 MSMPQ1L6U9 139 aa9.24□□□□□ -0.93
NIPBL-203ENST00000503274 C22orf34Q6ZV56 151 aa9.24□□□□□ -0.93
NIPBL-203ENST00000503274 LSRQ86X29 649 aaPredicted RBP9.24□□□□□ -0.93
NIPBL-203ENST00000503274 NETO1Q8TDF5 533 aa9.24□□□□□ -0.93
NIPBL-203ENST00000503274 C8orf37Q96NL8 207 aa9.24□□□□□ -0.93
NIPBL-203ENST00000503274 KRTAP9-2Q9BYQ4 174 aa9.24□□□□□ -0.93
NIPBL-203ENST00000503274 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.23□□□□□ -0.93
NIPBL-203ENST00000503274 CBX7O95931 251 aa9.23□□□□□ -0.93
NIPBL-203ENST00000503274 ITIH2P19823 946 aa9.23□□□□□ -0.93
NIPBL-203ENST00000503274 POLR2BP30876 1174 aaKnown RBP9.23□□□□□ -0.93
NIPBL-203ENST00000503274 DNAJA1P31689 397 aaKnown RBP9.23□□□□□ -0.93
NIPBL-203ENST00000503274 CHMP4BP1P59074 171 aa9.23□□□□□ -0.93
NIPBL-203ENST00000503274 PLD6Q8N2A8 252 aaKnown RBP9.23□□□□□ -0.93
NIPBL-203ENST00000503274 TAB3Q8N5C8 712 aaPredicted RBP9.23□□□□□ -0.93
NIPBL-203ENST00000503274 OR6P1Q8NGX9 317 aa9.23□□□□□ -0.93
NIPBL-203ENST00000503274 SHDQ96IW2 340 aa9.23□□□□□ -0.93
NIPBL-203ENST00000503274 KREMEN1Q96MU8 473 aa9.23□□□□□ -0.93
NIPBL-203ENST00000503274 SLC9A7Q96T83 725 aa9.23□□□□□ -0.93
NIPBL-203ENST00000503274 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.23□□□□□ -0.935e-6■□□□□ 8.9
NIPBL-203ENST00000503274 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.23□□□□□ -0.93
NIPBL-203ENST00000503274 PRR33A8MZF0 331 aa9.22□□□□□ -0.93
NIPBL-203ENST00000503274 ZNF865P0CJ78 1059 aaPredicted RBP9.22□□□□□ -0.93
NIPBL-203ENST00000503274 KIR3DL1P43629 444 aa9.22□□□□□ -0.93
NIPBL-203ENST00000503274 LRP8Q14114 963 aa9.22□□□□□ -0.93
NIPBL-203ENST00000503274 IFI16Q16666 785 aaKnown RBP9.22□□□□□ -0.93
NIPBL-203ENST00000503274 RUFY4Q6ZNE9 571 aa9.22□□□□□ -0.93
NIPBL-203ENST00000503274 NBPF11Q86T75 865 aa9.22□□□□□ -0.93
NIPBL-203ENST00000503274 MFSD4AQ8N468 514 aa9.22□□□□□ -0.93
NIPBL-203ENST00000503274 RNF141Q8WVD5 230 aa9.22□□□□□ -0.93
NIPBL-203ENST00000503274 GMLQ99445 158 aa9.22□□□□□ -0.93
NIPBL-203ENST00000503274 PLAGL2Q9UPG8 496 aa9.22□□□□□ -0.93
NIPBL-203ENST00000503274 KIAA1324LA8MWY0 1029 aaPredicted RBP9.21□□□□□ -0.94
NIPBL-203ENST00000503274 SSBP05455 408 aaKnown RBP eCLIP9.21□□□□□ -0.94
NIPBL-203ENST00000503274 ACRP10323 421 aa9.21□□□□□ -0.94
NIPBL-203ENST00000503274 SPINK2P20155 84 aa9.21□□□□□ -0.94
NIPBL-203ENST00000503274 GUCY2CP25092 1073 aa9.21□□□□□ -0.94
NIPBL-203ENST00000503274 NKPD1Q17RQ9 610 aa9.21□□□□□ -0.94
NIPBL-203ENST00000503274 DTX1Q86Y01 620 aa9.21□□□□□ -0.94
NIPBL-203ENST00000503274 BSDC1Q9NW68 430 aaPredicted RBP9.21□□□□□ -0.94
NIPBL-203ENST00000503274 COL17A1Q9UMD9 1497 aaPredicted RBP9.21□□□□□ -0.94
NIPBL-203ENST00000503274 KRTAP9-6A0A140TA67 174 aa9.2□□□□□ -0.94
NIPBL-203ENST00000503274 FAM155AB1AL88 458 aaPredicted RBP9.2□□□□□ -0.94
NIPBL-203ENST00000503274 FGRP09769 529 aa9.2□□□□□ -0.94
NIPBL-203ENST00000503274 SPACA3Q8IXA5 215 aa9.2□□□□□ -0.94
NIPBL-203ENST00000503274 ANAPC16Q96DE5 110 aa9.2□□□□□ -0.94
NIPBL-203ENST00000503274 ASPNQ9BXN1 380 aa9.2□□□□□ -0.94
NIPBL-203ENST00000503274 TNKS2Q9H2K2 1166 aa9.2□□□□□ -0.94
NIPBL-203ENST00000503274 PCMTD2Q9NV79 361 aa9.2□□□□□ -0.94
NIPBL-203ENST00000503274 CAPN6Q9Y6Q1 641 aa9.2□□□□□ -0.94
NIPBL-203ENST00000503274 TMEM265A0A087WTH1 108 aa9.19□□□□□ -0.94
NIPBL-203ENST00000503274 RBAK-RBAKDNI3L0D1 243 aa9.19□□□□□ -0.94
NIPBL-203ENST00000503274 HYAL3O43820 417 aaPredicted RBP9.19□□□□□ -0.94
NIPBL-203ENST00000503274 MCF2L2Q86YR7 1114 aa9.19□□□□□ -0.94
NIPBL-203ENST00000503274 TMEM192Q8IY95 271 aa9.19□□□□□ -0.94
NIPBL-203ENST00000503274 VWCEQ96DN2 955 aa9.19□□□□□ -0.94
NIPBL-203ENST00000503274 FBXL18Q96ME1 805 aa9.19□□□□□ -0.94
NIPBL-203ENST00000503274 SNX11Q9Y5W9 270 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms